prot_A-nodosum_M_contig845.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig845.12.1
Unique Nameprot_A-nodosum_M_contig845.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length111
Homology
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BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: D7FP13_ECTSI (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP13_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 1.490e-58
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDSNGIAQV AITGAKILR+LK+NGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQS+SASALVA
Sbjct:   67 QIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 169
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BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A6H5KYF2_9PHAE (Ribosomal_S13_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYF2_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 1.580e-58
Identity = 99/103 (96.12%), Postives = 102/103 (99.03%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDSNGIAQV AITGAKILR+LK+NGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQS+SASALVA
Sbjct:   69 QIGVILRDSNGIAQVSAITGAKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSASASALVA 171
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BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A6H5KEX7_9PHAE (Ribosomal_S13_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KEX7_9PHAE)

HSP 1 Score: 186 bits (472), Expect = 3.860e-58
Identity = 98/103 (95.15%), Postives = 103/103 (100.00%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDSNGIAQV+AITG+KILR+LK+NGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKY+SSSASALVA
Sbjct:   86 QIGVILRDSNGIAQVRAITGSKILRVLKANGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYESSSASALVA 188
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BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A7S2V1V2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1V2_9STRA)

HSP 1 Score: 179 bits (453), Expect = 9.270e-56
Identity = 92/103 (89.32%), Postives = 100/103 (97.09%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDSNGIAQV+++TG+K+LRLLK NGLA EIPEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRLARYYRTNRKLA NWKY+SS+ASALVA
Sbjct:   49 QIGVILRDSNGIAQVRSVTGSKVLRLLKKNGLAPEIPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTNRKLAPNWKYESSTASALVA 151
[Close]
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: H3G9F0_PHYRM (Ribosomal_S13_N domain-containing protein n=30 Tax=Oomycota TaxID=4762 RepID=H3G9F0_PHYRM)

HSP 1 Score: 171 bits (432), Expect = 1.460e-52
Identity = 87/103 (84.47%), Postives = 98/103 (95.15%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDS+GIAQVK++TG+K+LRLLK NGLA E+PEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRLARYYR NRKL+ NWKY+S++AS LVA
Sbjct:   49 QIGVILRDSHGIAQVKSVTGSKVLRLLKKNGLAPELPEDLYMLIKKAVAVRKHLERNRQDKDSKFRLILIESRIHRLARYYRKNRKLSPNWKYESATASTLVA 151
[Close]
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A6V1RUJ0_HETAK (Hypothetical protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RUJ0_HETAK)

HSP 1 Score: 170 bits (430), Expect = 2.940e-52
Identity = 87/103 (84.47%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGV+LRDSNGIAQVK++TG+KILR+LK NGLA EIPEDLYMLIKKAV VRKHLERNR+D D+KFRLILIESRIHRLARYYR NRKLA+NWKY+S +ASALVA
Sbjct:   49 QIGVMLRDSNGIAQVKSVTGSKILRILKKNGLAPEIPEDLYMLIKKAVQVRKHLERNRKDHDAKFRLILIESRIHRLARYYRLNRKLASNWKYESDTASALVA 151
[Close]
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A7S3GY39_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GY39_9STRA)

HSP 1 Score: 167 bits (423), Expect = 3.420e-51
Identity = 87/103 (84.47%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDSNGIAQVK++TG KILR+LK +GLA  IPEDLYMLIKKAVAVRKHL+RN++DKDSKFRLILIESRIHRL+RYYRT RKL ANWKYQS++ASALVA
Sbjct:   49 QIGVILRDSNGIAQVKSVTGNKILRILKKSGLAPAIPEDLYMLIKKAVAVRKHLDRNKKDKDSKFRLILIESRIHRLSRYYRTARKLDANWKYQSATASALVA 151
[Close]
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: B7FNY4_PHATC (Predicted protein n=3 Tax=Naviculales TaxID=38748 RepID=B7FNY4_PHATC)

HSP 1 Score: 166 bits (421), Expect = 6.900e-51
Identity = 84/102 (82.35%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALV 109
            QIGVILRDSNGIAQVK +TG K++R+LK+NGLA EIPEDLYMLIKKAV VRKHLERNR+DKDSKFRLILIESRIHRLARYYRT RKL +NWKY+S++AS +V
Sbjct:   49 QIGVILRDSNGIAQVKFVTGQKVVRILKANGLAPEIPEDLYMLIKKAVQVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLPSNWKYESATASTIV 150
[Close]
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: A0A4D9D0X7_9STRA (Ribosomal_S13_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D0X7_9STRA)

HSP 1 Score: 166 bits (419), Expect = 4.260e-50
Identity = 87/102 (85.29%), Postives = 95/102 (93.14%), Query Frame = 0 
Query:    9 IGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            IGVILRDS GIAQVKA+TG+KILRLLK N LA EIPEDLYMLIKKAVAVRKHLERNR+DKDSKFRLILIESRIHRLARYYRT RKL  NWKY+SS+A+++VA
Sbjct:   86 IGVILRDSYGIAQVKAVTGSKILRLLKKNLLAPEIPEDLYMLIKKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYRTTRKLTPNWKYESSTAASIVA 187
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BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Match: F0YHH5_AURAN (40S ribosomal protein S13 n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH5_AURAN)

HSP 1 Score: 164 bits (414), Expect = 8.020e-50
Identity = 85/103 (82.52%), Postives = 96/103 (93.20%), Query Frame = 0 
Query:    8 QIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYMLIKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKYQSSSASALVA 110
            QIGVILRDS+GI  VK++TG+KILRLLK NGLA EIPEDLYMLIKKAV+VRKH+ERNR DKDSKFRLILIESRIHRLARYYR+ RKL A+WKY+S++ASALVA
Sbjct:   49 QIGVILRDSSGIPAVKSVTGSKILRLLKKNGLAPEIPEDLYMLIKKAVSVRKHMERNRSDKDSKFRLILIESRIHRLARYYRSTRKLNASWKYESATASALVA 151
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig845.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP13_ECTSI1.490e-5896.12Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
A0A6H5KYF2_9PHAE1.580e-5896.12Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
A0A6H5KEX7_9PHAE3.860e-5895.15Ribosomal_S13_N domain-containing protein n=2 Tax=... [more]
A0A7S2V1V2_9STRA9.270e-5689.32Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H3G9F0_PHYRM1.460e-5284.47Ribosomal_S13_N domain-containing protein n=30 Tax... [more]
A0A6V1RUJ0_HETAK2.940e-5284.47Hypothetical protein n=3 Tax=Heterosigma akashiwo ... [more]
A0A7S3GY39_9STRA3.420e-5184.47Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
B7FNY4_PHATC6.900e-5182.35Predicted protein n=3 Tax=Naviculales TaxID=38748 ... [more]
A0A4D9D0X7_9STRA4.260e-5085.29Ribosomal_S13_N domain-containing protein n=1 Tax=... [more]
F0YHH5_AURAN8.020e-5082.5240S ribosomal protein S13 n=1 Tax=Aureococcus anop... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000589Ribosomal protein S15SMARTSM01387Ribosomal_S15_2coord: 29..108
e-value: 1.4E-10
score: 51.2
IPR000589Ribosomal protein S15PFAMPF00312Ribosomal_S15coord: 38..102
e-value: 6.4E-13
score: 48.8
IPR000589Ribosomal protein S15PROSITEPS00362RIBOSOMAL_S15coord: 57..87
IPR000589Ribosomal protein S15CDDcd00353Ribosomal_S15p_S13ecoord: 29..102
e-value: 1.94172E-23
score: 84.0918
NoneNo IPR availableGENE3D1.10.287.10coord: 43..110
e-value: 3.4E-37
score: 128.6
NoneNo IPR availableGENE3D4.10.860.130coord: 6..42
e-value: 1.5E-15
score: 58.6
NoneNo IPR availablePANTHERPTHR11885:SF640S RIBOSOMAL PROTEIN S13coord: 8..110
IPR023029Ribosomal protein S15PPANTHERPTHR11885RIBOSOMAL PROTEIN S15P/S13Ecoord: 8..110
IPR009068S15/NS1, RNA-bindingSUPERFAMILY47060S15/NS1 RNA-binding domaincoord: 25..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig845contigA-nodosum_M_contig845:134417..135906 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig845.12.1mRNA_A-nodosum_M_contig845.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig845 134417..135906 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig845.12.1 ID=prot_A-nodosum_M_contig845.12.1|Name=mRNA_A-nodosum_M_contig845.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=111bp
MFPPLALQIGVILRDSNGIAQVKAITGAKILRLLKSNGLAAEIPEDLYML
IKKAVAVRKHLERNRRDKDSKFRLILIESRIHRLARYYRTNRKLAANWKY
QSSSASALVA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000589Ribosomal_S15
IPR023029Ribosomal_S15P
IPR009068S15_NS1_RNA-bd