prot_A-nodosum_M_contig8443.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8443.1.1
Unique Nameprot_A-nodosum_M_contig8443.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length78
Homology
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BLAST of mRNA_A-nodosum_M_contig8443.1.1 vs. uniprot
Match: A0A6H5KC60_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC60_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.190e-10
Identity = 37/86 (43.02%), Postives = 47/86 (54.65%), Query Frame = 0 
Query:    1 GSDLHDATEPLDVT----------QRPKLVIVAIDAESRMLKVSTEDNGALDRVINKILHCLHPQGTVAFALPRPWHLHTGRICGE 76
             + LHD T PLD T            PKLVIV+I AE R+LK S   N  L RVI+ +   +HP GT+A  +P PW  H  R+ G+
Sbjct:  386 NATLHD-TVPLDPTGSDVDKLSFRNAPKLVIVSIGAEQRLLKTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRLQGD 470
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BLAST of mRNA_A-nodosum_M_contig8443.1.1 vs. uniprot
Match: A0A6H5LBJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LBJ9_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 7.110e-9
Identity = 34/83 (40.96%), Postives = 44/83 (53.01%), Query Frame = 0 
Query:    1 GSDLHDATEPLDVT----------QRPKLVIVAIDAESRMLKVSTEDNGALDRVINKILHCLHPQGTVAFALPRPWHLHTGRI 73
             + LHD   PLD T            PKLVIV+I AE R+L+ S   N  L RVI+ +   +HP GT+A  +P PW  H  R+
Sbjct:  328 NTTLHDIV-PLDPTGSDVDKLSFRNAPKLVIVSIGAEQRLLRTSEATNTHLRRVIDNVRGRMHPDGTIALVVPHPWSAHFHRL 409
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8443.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC60_9PHAE1.190e-1043.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LBJ9_9PHAE7.110e-940.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8443contigA-nodosum_M_contig8443:2524..2757 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8443.1.1mRNA_A-nodosum_M_contig8443.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8443 2524..2757 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8443.1.1 ID=prot_A-nodosum_M_contig8443.1.1|Name=mRNA_A-nodosum_M_contig8443.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=78bp
GSDLHDATEPLDVTQRPKLVIVAIDAESRMLKVSTEDNGALDRVINKILH
CLHPQGTVAFALPRPWHLHTGRICGEV*
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