prot_A-nodosum_M_contig842.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig842.7.1
Unique Nameprot_A-nodosum_M_contig842.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length201
Homology
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: D8LJF7_ECTSI (Photosystem II oxygen evolution complex protein PsbP n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJF7_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 2.460e-83
Identity = 134/200 (67.00%), Postives = 159/200 (79.50%), Query Frame = 0
Query:    1 MSAEEPSSRARFLAASATVATSAVVLPLGAIADEQATTATVSQPEKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL 200
            MSAE PS RA+FL  SA VA SAV+LPL A+ADE  T +     ++V LVTTKLGG+LEPFADVSKGYRLAKP+GWNR+DG +GEY VKMVDLVD +  ILL NSPVKSDT L+ +G    +GEKLSK RD E+V ARDR+TEG+R+YD+EFK   R EL+TL VNK+KLW LT+ CPEK+W +Q + FKTIVDSFLPRL
Sbjct:   38 MSAEGPSDRAQFLTTSAAVAASAVMLPLVAVADEGETGS-----KQVKLVTTKLGGKLEPFADVSKGYRLAKPLGWNRYDGTSGEYTVKMVDLVDPTTLILLTNSPVKSDTELSTLGSATQVGEKLSKGRDMELVSARDRVTEGIRLYDFEFKGGGRRELKTLSVNKNKLWNLTLGCPEKAWEKQEEPFKTIVDSFLPRL 232          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A6V2XVF7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XVF7_HETAK)

HSP 1 Score: 152 bits (383), Expect = 1.120e-42
Identity = 80/201 (39.80%), Postives = 128/201 (63.68%), Query Frame = 0
Query:    1 MSAEEPSSRARFLAASATVATSAVVLPLGAIADEQATTATVSQPEKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCP-EKSWNQQGQVFKTIVDSFLPRL 200
            M+AE    R   LAA AT A +   +P+ A A+          PE+V   T+++GG ++P+ DV+KG++L +P GW+ F    GEY VK VDLV++++TI +  +PVKS T++  +G++ ++G KL+ +R AE++ A D+ITE +R Y +EFK    +E+  L +NK +LW L+   P EKSW ++ + ++ +  SFLPRL
Sbjct:   38 MTAEGAMGRREVLAA-ATAAVATATVPIVAFAE----------PEQVERATSRMGGTMDPYNDVNKGFKLMRPGGWDAFSNAPGEYDVKFVDLVNKAETITVSTTPVKSSTSIDALGEVGAVGAKLAASRGAELLSANDKITENIRAYTFEFKKGSSYEIYQLSINKGRLWSLSCVAPSEKSWAKRKEAYRVVAGSFLPRL 227          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7S3LCU1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LCU1_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.740e-38
Identity = 68/158 (43.04%), Postives = 106/158 (67.09%), Query Frame = 0
Query:   45 EKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDT-TLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKD-RHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL 200
            E  P V T++GG LEPF D ++G RL  P GWN+FDGE G Y +K  DLVD ++ I L +SPVKS T ++  +G ++ +G+ L+  R+A+++ A +R+T+G+  Y +EF   D  H+L  L V K KLW L  +  EK W+++G++++ I+ SF+P+L
Sbjct:   55 EDTPRVVTRMGGLLEPFQDGTRGIRLMAPSGWNKFDGEVGAYDIKWQDLVDPTENIKLSSSPVKSTTESVAPLGPVEEVGKSLAAKRNAKLLAAEERVTDGILFYKFEFAIADGTHQLLQLCVAKGKLWSLDASSKEKRWSKRGELYQNILGSFIPKL 212          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7S2MZD3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MZD3_9STRA)

HSP 1 Score: 140 bits (354), Expect = 2.640e-38
Identity = 68/158 (43.04%), Postives = 104/158 (65.82%), Query Frame = 0
Query:   45 EKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTT-LTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKD-RHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL 200
            E+ P VTT++GG LE + D  +G+ +  P GWN+F+GE G Y VK  DLVD  + I + +SPVKS TT +  +G++Q +G KL+  RDA+++KA +RIT+G+  Y ++F   D  H+L  L VNK K+W L     EK W ++ +++  ++ SFLP+L
Sbjct:   70 EETPRVTTRMGGLLERYQDGPRGWSILAPSGWNKFEGEVGAYDVKWQDLVDPRENIKVSSSPVKSSTTSIDALGEVQEIGAKLAAKRDAKLIKAEERITDGILFYKFDFAINDGTHQLLQLCVNKGKVWSLDANTTEKRWAKREEMYDNVLGSFLPKL 227          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7R9Y8Q4_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y8Q4_9STRA)

HSP 1 Score: 139 bits (351), Expect = 6.490e-38
Identity = 66/155 (42.58%), Postives = 103/155 (66.45%), Query Frame = 0
Query:   45 EKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPR 199
            E+VPL  ++LGG LEP++D+ +G+RL  P  WN+F+   G Y V+ VDLV+  + +LL  SPVKSD +L  +G  + +GEKL+ +R+A+ V A  R TEG+  YD+EF+ K  HE  TL + +++LW L++    K+W+++   F  I  SF+P+
Sbjct:   69 EEVPLSKSRLGGVLEPYSDIQRGFRLMAPYSWNKFENGEG-YDVRWVDLVNVKENVLLRTSPVKSDASLEAIGTPEKIGEKLAASREAQCVSATARQTEGLLFYDFEFESKAAHEYATLAIARNRLWNLSVVTEPKNWSKRKASFDGIRKSFIPK 222          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A6S8ZX58_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZX58_9STRA)

HSP 1 Score: 136 bits (343), Expect = 1.060e-36
Identity = 65/158 (41.14%), Postives = 105/158 (66.46%), Query Frame = 0
Query:   45 EKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTT-LTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKD-RHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL 200
            E+ P + +++GG LE + D ++G  L  P GWN+F+GE G Y VK  DLVD  + + + +SPVKS T+ + ++G++Q +G KL+  RDA+++KA +RIT+G+  Y ++F   D  H+L  L VNK K+W L     EK W+++ +++  I+ SFLP+L
Sbjct:   65 EETPRIVSRMGGLLERYQDGARGLSLLVPSGWNKFEGEVGAYDVKWQDLVDPRENVKISSSPVKSTTSSIDVLGEVQEVGLKLAAKRDAKLIKAEERITDGILFYKFDFAINDGTHQLLQLCVNKGKVWSLDANTTEKRWSKREEMYNNILGSFLPKL 222          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: B7G6V4_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G6V4_PHATC)

HSP 1 Score: 136 bits (342), Expect = 1.270e-36
Identity = 66/159 (41.51%), Postives = 108/159 (67.92%), Query Frame = 0
Query:   45 EKVPLVTTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDT-TLTMVGD-LQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKD-RHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL 200
            ++ P V T++GG LE F D  +G+R+  P GWN+F+GE G Y VK  DLVD S+ + + ++PVKS T ++  +GD +Q+LG KL++ R+A+++ A +R+TEG+  Y+++F  KD  H+L  L V K +LW L     EK W+++ +++  ++ SF+PRL
Sbjct:   59 DETPRVATRMGGLLEAFQDGPRGFRIMIPSGWNKFEGEVGAYDVKWQDLVDPSENVKISSTPVKSTTESVAALGDDVQALGLKLAEKRNAKLISASERLTEGILFYNFDFAIKDGTHQLLQLCVGKGRLWSLDANSKEKRWDKREEMYSNVLASFIPRL 217          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7S4JXM0_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4JXM0_9EUKA)

HSP 1 Score: 133 bits (334), Expect = 2.010e-35
Identity = 59/147 (40.14%), Postives = 101/147 (68.71%), Query Frame = 0
Query:   52 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLP 198
            ++LGG LEPF D+ KGY+L KP GW ++  + G Y VK  D+++  +++++ +SPV + T+++ +GDL ++G K +K+R+AE+VKA +R  +G  +Y  E K    HEL TL +N+ KL+R+T T   K W+++ +++  I+ SF+P
Sbjct:   69 SRLGGLLEPFVDIQKGYKLYKPSGWTQYSIDPGVYDVKFADIIEPFESVIVSSSPVATATSISALGDLPTVGAKFAKSRNAELVKATERTADGNLVYTLELKGDVYHELLTLSINRGKLFRVTATATNKRWSKRSELYSNIMLSFVP 215          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7S4BPW2_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BPW2_CHRCT)

HSP 1 Score: 131 bits (330), Expect = 9.130e-35
Identity = 57/148 (38.51%), Postives = 101/148 (68.24%), Query Frame = 0
Query:   52 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPR 199
            +++GG LEPF DV KGY+L KP+ WN+FD + G Y VK  D+++  + + + +SPV + T+++ +GD+ ++G K +K+R+AE++ A++R  +G  +Y +E K +  HE   L VN+ KL+R++     K W ++ ++FK I+ SF+P+
Sbjct:   74 SRMGGALEPFIDVQKGYKLYKPVAWNQFDADPGVYDVKFQDVIEPFEIVQVSSSPVTTATSVSALGDVSAVGVKFAKSRNAELISAKERDADGSLVYTFELKGEMYHEYLALAVNRGKLFRVSTVTSNKRWPKREELFKNIILSFVPK 221          
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Match: A0A7S3C4X1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3C4X1_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 3.010e-34
Identity = 57/148 (38.51%), Postives = 101/148 (68.24%), Query Frame = 0
Query:   52 TKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTILLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDYEFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPR 199
            +K+GG LEPF + SKG++L KP GW ++D + G Y VK  D++D  +T+++ + PV++ T+++ +GDL ++G K +K+R+A+++ A  R +EG  IY  + +     EL  L ++K +L+RL+     K W+++G+++K IV SF+PR
Sbjct:   80 SKMGGLLEPFIETSKGFKLYKPSGWTQYDTDPGVYDVKFADIIDPFETVIVSSQPVQTATSVSALGDLDAVGAKFAKSRNAQLISASQRDSEGTLIYTLDLQGDTYRELLLLTISKGRLFRLSTVATNKRWSKRGELYKNIVASFVPR 227          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig842.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D8LJF7_ECTSI2.460e-8367.00Photosystem II oxygen evolution complex protein Ps... [more]
A0A6V2XVF7_HETAK1.120e-4239.80Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S3LCU1_9STRA1.740e-3843.04Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S2MZD3_9STRA2.640e-3843.04Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7R9Y8Q4_9STRA6.490e-3842.58Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S8ZX58_9STRA1.060e-3641.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
B7G6V4_PHATC1.270e-3641.51Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S4JXM0_9EUKA2.010e-3540.14Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S4BPW2_CHRCT9.130e-3538.51Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S3C4X1_9EUKA3.010e-3438.51Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002683PsbP, C-terminalPFAMPF01789PsbPcoord: 58..196
e-value: 1.5E-19
score: 70.6
NoneNo IPR availableGENE3D3.40.1000.10Mog1/PsbP, alpha/beta/alpha sandwichcoord: 50..197
e-value: 8.4E-24
score: 86.3
IPR006311Twin-arginine translocation pathway, signal sequencePROSITEPS51318TATcoord: 1..32
score: 7.886653
IPR016123Mog1/PsbP, alpha/beta/alpha sandwichSUPERFAMILY55724Mog1p/PsbP-likecoord: 60..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig842contigA-nodosum_M_contig842:56068..57687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig842.7.1mRNA_A-nodosum_M_contig842.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig842 49003..58749 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig842.7.1 ID=prot_A-nodosum_M_contig842.7.1|Name=mRNA_A-nodosum_M_contig842.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=201bp
MSAEEPSSRARFLAASATVATSAVVLPLGAIADEQATTATVSQPEKVPLV
TTKLGGQLEPFADVSKGYRLAKPIGWNRFDGEAGEYVVKMVDLVDRSKTI
LLYNSPVKSDTTLTMVGDLQSLGEKLSKNRDAEIVKARDRITEGMRIYDY
EFKYKDRHELQTLVVNKSKLWRLTITCPEKSWNQQGQVFKTIVDSFLPRL
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002683PsbP_C
IPR006311TAT_signal
IPR016123Mog1/PsbP_a/b/a-sand