prot_A-nodosum_M_contig842.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig842.17.1
Unique Nameprot_A-nodosum_M_contig842.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length354
Homology
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BLAST of mRNA_A-nodosum_M_contig842.17.1 vs. uniprot
Match: A0A1V9Z6H9_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z6H9_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 8.350e-5
Identity = 29/73 (39.73%), Postives = 44/73 (60.27%), Query Frame = 0 
Query:   71 PYMDIRTVKNNLTVDQAAKLEGQSHCLLLVEPVILPDLGHTGVRREMLPDDHPIFYMDGHKSCGLSATVHKAL 143
            PY+D+ TV++   +  A   E + H  LLVEP+ +PDL HTG+  +  P   P+FY +G K+  L A V ++L
Sbjct:   10 PYLDVMTVQSRRYIAHADLAE-EVHTKLLVEPIHIPDLHHTGIAVDG-PGSVPLFYPNGAKNVHLRAVVQQSL 80
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig842.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1V9Z6H9_9STRA8.350e-539.73Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..221
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..327
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 193..250
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..302
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 310..327

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig842contigA-nodosum_M_contig842:207001..208986 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig842.17.1mRNA_A-nodosum_M_contig842.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig842 206799..209024 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig842.17.1 ID=prot_A-nodosum_M_contig842.17.1|Name=mRNA_A-nodosum_M_contig842.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=354bp
MPKMSRAQKQEPKSCRGTRQRRRRKPVANDLGVSGEPDNLLSSTSASSTD
DSYLAAQGDGQCSAIYGYNPPYMDIRTVKNNLTVDQAAKLEGQSHCLLLV
EPVILPDLGHTGVRREMLPDDHPIFYMDGHKSCGLSATVHKALYESTCNR
KQKELGDRDQQLPLEQSDSSVCTTPFDYPSRMGSEDEVGAITKGHQGGKF
PSDVSEETRPGVRDTRKHRSGMISTNKTSSSTLGHVECEEGGGQRSLSEN
TAARLQRSGTLLIKSQQQQQQPVTHSEGDTSTLAFGAETSRARTTSHKKS
SAPGWRKQGELRGGGRDSEWSKERRAADQEAREVLSAVRQNSLMMSFLVG
GGI*
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