prot_A-nodosum_M_contig842.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig842.1.1
Unique Nameprot_A-nodosum_M_contig842.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length374
Homology
BLAST of mRNA_A-nodosum_M_contig842.1.1 vs. uniprot
Match: A0A6H5KLJ1_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLJ1_9PHAE)

HSP 1 Score: 479 bits (1233), Expect = 8.660e-165
Identity = 247/391 (63.17%), Postives = 306/391 (78.26%), Query Frame = 0
Query:    1 MLVERAVKILNHFWGETGGDLYSRWLDRFEAKQGLGDDVIDRMGWSRFLLKMMREEPQDAVVVRTAKKDSDEVIEARNK--NSARPPTLSPWRHTVNQLSADWDAEEEEEMKVALDHPPQLKSVSTSVVVQPVDIAKKIMNVREMLAAEWREDLANMETENEEIARVDADKMRL------GEEEAERA------RRLTYDHGEAFGGDSSPFRAENYEALVDFVTEIGAIAVQERMRQIGDDMGWNWMEQFLYWAKANSRSGSA--GAEAAGTPPMSPA--ASQGGIGEDRGAMGKAVQATFGSAGGGVYEADEEKKMRGNRLLEAMIMGQKVQMLNPETGELMGVDPAEVCKSVMAARVGVAERIRVSLDAVSEDHGLVMRKYLQEKWHS 373
            MLV+RAV+ + H W ETGGD+Y +WLDRF A+Q LGDDVI  MGW+RFL+KMMREEP +AVV+RTAKKDS +VIEA+ K  N+ARPPTLSPWRH+VNQLSADWDAEEEEEMKVALD+PPQLK+V  SVVVQP ++AKK+M++RE LA EWREDL N+E EN+EI R+D D+ R       G +E E+       RRLTYDHG+AFGGDSSP R++NYE LV ++TEI A+ VQERMR  GDDMGWNWMEQFLYWAKANS+ GSA  G E+  +PP  P+     GGIGE+RGA GK V+A FG+AG G+   DE++K RGNR+LE M+MGQKVQ  + +  +L+GVDPAE+ + VM AR+ VA RI  +L+ V  DHGLV+R+YL++KW +
Sbjct:   82 MLVDRAVETVRHLWNETGGDIYGQWLDRFTARQNLGDDVISTMGWARFLIKMMREEPVEAVVIRTAKKDSPQVIEAQRKARNNARPPTLSPWRHSVNQLSADWDAEEEEEMKVALDYPPQLKAVKRSVVVQPAELAKKLMDIREQLALEWREDLKNIEVENDEIVRLDNDRRRRAREAGPGYDEVEQGGXXXSRRRLTYDHGQAFGGDSSPLRSDNYETLVGYLTEIAALVVQERMRVDGDDMGWNWMEQFLYWAKANSKYGSAAPGDESLESPPPFPSDNGGDGGIGEERGARGKRVKAAFGAAGVGMGGTDEDRKTRGNRMLEEMLMGQKVQTFDFKKNDLVGVDPAEIGQLVMDARIEVARRISTALETVPADHGLVLRRYLEDKWEA 472          
BLAST of mRNA_A-nodosum_M_contig842.1.1 vs. uniprot
Match: A0A835YQU4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQU4_9STRA)

HSP 1 Score: 106 bits (265), Expect = 5.040e-22
Identity = 101/416 (24.28%), Postives = 159/416 (38.22%), Query Frame = 0
Query:    1 MLVERAVKILNHFWGETGGDLYSRWLDRFEAKQGLGDDVIDRMGWSRFLLKMMREEPQDAVVVRTAKKDSDEVIEARNKNSARPPTLSPWRHTVNQLSADWDAEEEEEMKVALDHPPQLKSVSTSVVVQPVDIAKKIMNVREMLAAEWREDLANMETENEEIARVDADKMRLGEEEAERARRLTYDH------GEAFG---------GDSSPFRAENYEA--------------------------LVDFVTEIGAIAVQERMRQIGDDMGWNWMEQFLYWAKANSRSGSAGAEAAGTPPMSPAASQGGIGEDRGAMGKAVQATFGSAGGGVYEADEEKKMRGNRLLEAMIMGQKVQMLNPE----TGELMGVDPAEVCKSVMAARVGVAERIRVSLDAVSEDHGLVMRKYLQEKW 371
            +L  +A   + ++W E   +L  RWL  FE         + ++GW  FL  +MR EP++  V + A++            S   P LS  RH +                              +V+++P  IAK+IM VRE LA EW +DL  +ETEN E+ R   D + +  ++A+ +R+L +DH      GE            G   P+R +NY A                          L+  VT +     +  +RQ G     NW+E+F+                                                 GG        K ++GN LLE+M+ G  + M+NP+    + +   ++PA++ K VM  R   AE IR  L  V  DH  +    L+++W
Sbjct:   68 LLAVQASASVQYYWMEFRDELQPRWLKEFEE----AGHNVGQVGWDHFLGSLMRTEPEEVTVRKMAQRPKG--------GSGNNPFLSDTRHAMEY----------------------------TVLIEPFQIAKRIMTVREQLAQEWIKDLELVETENAELLRHHVDTLSMDAKQADSSRQLVFDHDPCAVEGEVLXXXXXXXXXYGTKLPYRGKNYRADSSRXXXXXXXXXXXXXXXXXXXXXELLAMVTRVAVRRYEAELRQSGHRYHQNWLERFML-----------------------------------------------KGG--------KGLKGNALLESMLNG-PMMMINPKVRGNSDKPRVIEPAQIAKGVMLRRATAAEEIRTILGTVPGDHLRLKASMLEQQW 387          
BLAST of mRNA_A-nodosum_M_contig842.1.1 vs. uniprot
Match: A0A2V3J0R6_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0R6_9FLOR)

HSP 1 Score: 59.7 bits (143), Expect = 2.710e-6
Identity = 37/111 (33.33%), Postives = 62/111 (55.86%), Query Frame = 0
Query:  128 VQPVDIAKKIMNVREMLAAEWREDLANMETENEEIARVDADKMRLGEE-EAERARRLTYDHGEAFGGDSSPFRAENYEALVDFVTEIGAIAVQERMRQIGDDMGWNWMEQF 237
            V+P  +AK+I+++R+ LAAEW  DL  +E EN EI R+  ++    +E + E  R+L +D  + F  D +P R +NY AL   +T      +   +R  G +  + ++ QF
Sbjct:  136 VEPFRLAKRILDIRKQLAAEWVGDLRCIEMENLEIQRMAIERALCSDEAQLESKRKLIFD-SDPFASDQTPLRYKNYHALKTLITSHAVSRLLPYVRDCGSNHDYMYLLQF 245          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig842.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KLJ1_9PHAE8.660e-16563.17Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YQU4_9STRA5.040e-2224.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A2V3J0R6_9FLOR2.710e-633.33Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 145..175
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..272

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig842contigA-nodosum_M_contig842:19689..34584 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig842.1.1mRNA_A-nodosum_M_contig842.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig842 19621..35023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig842.1.1 ID=prot_A-nodosum_M_contig842.1.1|Name=mRNA_A-nodosum_M_contig842.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=374bp
MLVERAVKILNHFWGETGGDLYSRWLDRFEAKQGLGDDVIDRMGWSRFLL
KMMREEPQDAVVVRTAKKDSDEVIEARNKNSARPPTLSPWRHTVNQLSAD
WDAEEEEEMKVALDHPPQLKSVSTSVVVQPVDIAKKIMNVREMLAAEWRE
DLANMETENEEIARVDADKMRLGEEEAERARRLTYDHGEAFGGDSSPFRA
ENYEALVDFVTEIGAIAVQERMRQIGDDMGWNWMEQFLYWAKANSRSGSA
GAEAAGTPPMSPAASQGGIGEDRGAMGKAVQATFGSAGGGVYEADEEKKM
RGNRLLEAMIMGQKVQMLNPETGELMGVDPAEVCKSVMAARVGVAERIRV
SLDAVSEDHGLVMRKYLQEKWHS*
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