prot_A-nodosum_M_contig8417.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8417.1.1
Unique Nameprot_A-nodosum_M_contig8417.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length92
Homology
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A8J2WLN9_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WLN9_9CRUS)

HSP 1 Score: 59.3 bits (142), Expect = 3.020e-8
Identity = 28/79 (35.44%), Postives = 44/79 (55.70%), Query Frame = 0
Query:   14 YGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGNMDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            + W ADSGA+ HMT  R+ ++N +P  PG   +T      + V   G + V+  G+ +    +  V +VPDLG NL+S+
Sbjct:  343 FDWFADSGATSHMTDQRSLIFNYKPVTPGSWMVTGIGGATLPVHGQGQVSVLTEGEVESERIISPVLHVPDLGTNLFSI 421          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A7D9I5T4_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I5T4_PARCT)

HSP 1 Score: 57.4 bits (137), Expect = 1.420e-7
Identity = 31/82 (37.80%), Postives = 50/82 (60.98%), Query Frame = 0
Query:   13 DYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGN--MDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            D  W+ DSGAS HMT +++ + N +      E++ +GD R ++   +GN  MD++F G+  +R  L +V YVP L  NL+S+
Sbjct:  239 DCHWLIDSGASSHMTKEKSVLVNYQQFGEP-ESVALGDGRVVQALGSGNVHMDMLFSGRKSKRGVLCNVLYVPKLTSNLFSV 319          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A0D1DPX6_USTMA (Retrotransposon HobS hobase n=1 Tax=Ustilago maydis (strain 521 / FGSC 9021) TaxID=237631 RepID=A0A0D1DPX6_USTMA)

HSP 1 Score: 57.0 bits (136), Expect = 2.050e-7
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   16 WIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGNMDVIFHGKSDQR--ITLIDVAYVPDLGFNLYS 91
            WI DSGAS HMT D+T +++   P P +E + + D R + V   GN+ ++       R  ITL DV +VP LG NL+S
Sbjct:  329 WIIDSGASRHMTGDKT-LFSTYGPSPVQE-VFVADNRGVPVAGMGNVRLVMSNSKGSRKSITLQDVLHVPGLGNNLFS 404          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: Q2EPY7_USTMD (Hobase n=1 Tax=Ustilago maydis TaxID=5270 RepID=Q2EPY7_USTMD)

HSP 1 Score: 57.0 bits (136), Expect = 2.070e-7
Identity = 33/78 (42.31%), Postives = 46/78 (58.97%), Query Frame = 0
Query:   16 WIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGNMDVIFHGKSDQR--ITLIDVAYVPDLGFNLYS 91
            WI DSGAS HMT D+T +++   P P +E + + D R + V   GN+ ++       R  ITL DV +VP LG NL+S
Sbjct:  328 WIIDSGASRHMTGDKT-LFSTYGPSPVQE-VFVADNRGVPVAGMGNVRLVMSNSKGSRKSITLQDVLHVPGLGNNLFS 403          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A7D9F0C3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9F0C3_PARCT)

HSP 1 Score: 56.6 bits (135), Expect = 2.730e-7
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   13 DYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGN--MDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            D  W+ DSGAS HMT +++ + N +      E++ +GD R ++   +GN  MD++F G   +R  L +V YVP L  NL+S+
Sbjct:  101 DCHWLIDSGASSHMTKEKSVLVNYQQFGEP-ESVALGDGRVVQALGSGNVHMDMLFSGSKSKRGVLCNVLYVPKLTSNLFSV 181          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A6S7JQN7_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JQN7_PARCT)

HSP 1 Score: 56.6 bits (135), Expect = 2.760e-7
Identity = 31/82 (37.80%), Postives = 49/82 (59.76%), Query Frame = 0
Query:   13 DYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGN--MDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            D  W+ DSGAS HMT +++ + N +      E++ +GD R ++   +GN  MD++F G   +R  L +V YVP L  NL+S+
Sbjct:  265 DCHWLIDSGASSHMTKEKSVLVNYQQFGEP-ESVALGDGRVVQALGSGNVHMDMLFSGSKSKRGVLCNVLYVPKLTSNLFSV 345          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: UPI001EEB25ED (uncharacterized protein LOC124337673 n=1 Tax=Daphnia pulicaria TaxID=35523 RepID=UPI001EEB25ED)

HSP 1 Score: 56.2 bits (134), Expect = 3.570e-7
Identity = 30/81 (37.04%), Postives = 46/81 (56.79%), Query Frame = 0
Query:   12 EDYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGNMDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            E YG++ADSGAS HMT  R+ + N +P   G  T+      R+ V+  G+++V+    +   + L D   VP LG NL+S+
Sbjct:  251 ETYGFVADSGASQHMTDKRSILINFKPYEEGAHTVVGIGNTRLAVKGKGDVEVV--NTAGVSLLLTDCLLVPGLGMNLFSI 329          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A3S4Q8K1_9ACAR (Retrovirus-related Pol polyprotein from transposon TNT 1-94-like protein (Fragment) n=1 Tax=Dinothrombium tinctorium TaxID=1965070 RepID=A0A3S4Q8K1_9ACAR)

HSP 1 Score: 55.8 bits (133), Expect = 5.190e-7
Identity = 31/84 (36.90%), Postives = 49/84 (58.33%), Query Frame = 0
Query:   10 SNEDYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGN-MDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            S++   WIADSGAS H++  +  + + +P    RE + I + + I VE  GN +  +F GK     T+ +V YVP+ G NL+S+
Sbjct:    4 SDKSVAWIADSGASEHISFHKEWLQDFKPIETKRE-LRIANNKVINVEGVGNILATVFDGKRWSNATIYNVLYVPESGVNLFSI 86          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A6S7J908_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7J908_PARCT)

HSP 1 Score: 55.1 bits (131), Expect = 8.910e-7
Identity = 30/82 (36.59%), Postives = 48/82 (58.54%), Query Frame = 0
Query:   13 DYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGN--MDVIFHGKSDQRITLIDVAYVPDLGFNLYSL 92
            D  W+ DSGAS H+T D++ + N +      E++ +GD   ++   +GN  MD++F G   +R  L +V YVP L  NL+S+
Sbjct:  275 DCHWLIDSGASSHLTKDKSVLVNYQQFGEP-ESVALGDGHVVQALGSGNVHMDMLFSGSKSKRGVLCNVLYVPKLTSNLFSV 355          
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Match: A0A0J7K651_LASNI (Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K651_LASNI)

HSP 1 Score: 54.3 bits (129), Expect = 1.830e-6
Identity = 30/83 (36.14%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   11 NEDYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGDRRRIKVEYTGNMDVIFH-GKSDQRITLIDVAYVPDLGFNLYSL 92
            N +  W+ADSGAS HMT +R+      P    + +IT+G+   +  +  G++ V  H G    +  LI+V YVP++  NL+SL
Sbjct:  271 NREQDWLADSGASHHMTMNRSWFCEFEPITENQLSITVGNSGVVYAKGRGSVQVSAHVGNKIIKHKLINVLYVPEIRCNLFSL 353          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8417.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
A0A8J2WLN9_9CRUS3.020e-835.44Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
A0A7D9I5T4_PARCT1.420e-737.80Uncharacterized protein n=1 Tax=Paramuricea clavat... [more]
A0A0D1DPX6_USTMA2.050e-742.31Retrotransposon HobS hobase n=1 Tax=Ustilago maydi... [more]
Q2EPY7_USTMD2.070e-742.31Hobase n=1 Tax=Ustilago maydis TaxID=5270 RepID=Q2... [more]
A0A7D9F0C3_PARCT2.730e-737.80Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7JQN7_PARCT2.760e-737.80Retrovirus-related Pol poly from transposon TNT 1-... [more]
UPI001EEB25ED3.570e-737.04uncharacterized protein LOC124337673 n=1 Tax=Daphn... [more]
A0A3S4Q8K1_9ACAR5.190e-736.90Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7J908_PARCT8.910e-736.59Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0J7K651_LASNI1.830e-636.14Gag-pol polyprotein n=1 Tax=Lasius niger TaxID=677... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8417contigA-nodosum_M_contig8417:22115..22390 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8417.1.1mRNA_A-nodosum_M_contig8417.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8417 22115..22390 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8417.1.1 ID=prot_A-nodosum_M_contig8417.1.1|Name=mRNA_A-nodosum_M_contig8417.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=92bp
HSAFVKQSGSNEDYGWIADSGASCHMTHDRTRMYNARPPPPGRETITIGD
RRRIKVEYTGNMDVIFHGKSDQRITLIDVAYVPDLGFNLYSL
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