prot_A-nodosum_M_contig840.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig840.10.1
Unique Nameprot_A-nodosum_M_contig840.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length923
Homology
BLAST of mRNA_A-nodosum_M_contig840.10.1 vs. uniprot
Match: D7FKD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD6_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 4.740e-150
Identity = 315/668 (47.16%), Postives = 402/668 (60.18%), Query Frame = 0
Query:    1 MGITSTKMRHEITALKAEIITMERRQAYLVKAAVKQAEVRLSIERERAVREERSRVDQLEELRSVAELENELLKEMVAAEQVNVKLQQKRNQALKWELLRQGGTQEKFDSIVKEVPDLGDTLRADTAHVVHEATTYGMSEAIEHVVSALGDVEEEMRQAFLARDKGRTGALPGSNFKDALRECLPNMPRAERCLLALRFARDEDQSIDYSEFLGFCRRKAQTRERQKLGLVEALAASRSVEPLGVASLGGNRALAATRASKGMTEEQ-----------KLSKNPSAYVRGIPRPEENSREQERGC---PEVFKQGFGHQALQAKRKRVDQKFDVLVARKMTDMIHKRGKDLELMLKRADPAGAGVIPVKQFSECLRSLNVVEVAEGN-----RRKKK------LLLTRSDRKDLYRMWAVHGQVHYNDFLRAGGYANSPPLRYSQSFTTDRRPSLARHNTSPPLPRSADAQGVDELSAPRLQG--LKTDKLKAQAAWAEPRLEEADEELLPARNEVVLAHLAQVLEKKGEETLFEEFEERDADGCRTVDEYDLMDAMAAFAPEVTTEQALDLFRARSNEAEGS---IAYDKFFKELRKRARAGVFQSGDDVQFRVEDREGRLHWVDGQVVSRDEEDSTYTVRFKS--RVPGR--GYVEEYGVIEGHLR 634
            MG ++TKM+ E+TALKA I++ME+ Q+Y+V AAVK+   +L +ER+RAV EER+R DQLEE RSVA+L+NELL EMVAAEQVNVKL ++RN+ALKWELLRQGG QE FDSI KEVP LGDTLRADTA V+H    + M+EAIEHVV  +G+V++++++AFLARD GRTGAL G+ FKDAL+E  P+MPR +R LL LRF R+ DQS+DY EFL FCR KA++RER K+GL  ALAA+RS    G         LA T   +G   ++             S +P A  RG P     + +  RG      +F QG     ++A            +  K++ +I +RG +LE +L   DP  +G IPVK FSECLR+    +   G      R  K+        LT +DRK LYR W V GQV Y DFL A GY N+P  RYS+  T      +A    +   P   DA     ++  R  G  L  DK    A  A+   EE     L  R+ VVL HL++VL  +GEE  F  FE +D    R +DE   +DA+   APEVT EQ  D+F  RS   EGS     YD+ FK+LRK A+ G FQSGD V+ RVE R  R+ WV  QVVSRD  D TYTVRFKS  +VPG     +++ GV E  +R
Sbjct:    1 MGSSNTKMKEEVTALKAHIVSMEKEQSYVVNAAVKKTAEQLVLERDRAVEEERARADQLEEQRSVAQLQNELLTEMVAAEQVNVKLHERRNEALKWELLRQGGCQETFDSIAKEVPVLGDTLRADTADVLHGVAKHDMAEAIEHVVCGIGEVKDDLQEAFLARDTGRTGALGGAAFKDALKESFPDMPREDRQLLMLRFVREVDQSVDYGEFLEFCRHKAESRERLKMGLTGALAATRSAGRFGKCPTTRAGGLACTMPVQGTLGQRPKPFFATALMLSRSDDPPASERGSPFDGWGAGKSRRGTGRTDSIFTQGPNDPGVEAP-----------IQEKVSTLISRRGPELEALLLLRDPERSGNIPVKAFSECLRAWASSDSERGGGGAGTRAGKREGPSQAAELTHADRKVLYRRWVVRGQVRYVDFLGASGYFNAPLPRYSEISTA-----VAAAPAAAAAPVVTDAPARHPVTRKRASGSLLSGDKAGMHARNADAGEEETG---LLERSRVVLVHLSEVLRDEGEEAYFAAFEAQDYGNYRCLDEDGFVDAIETLAPEVTAEQVHDVFLVRSR-IEGSDDKANYDELFKDLRKLAQIGGFQSGDAVELRVESRGSRVDWVPAQVVSRDG-DGTYTVRFKSPTKVPGATGACMKQSGVSESDMR 647          
BLAST of mRNA_A-nodosum_M_contig840.10.1 vs. uniprot
Match: A0A6H5JBT1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBT1_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 3.890e-88
Identity = 157/238 (65.97%), Postives = 193/238 (81.09%), Query Frame = 0
Query:    8 MRHEITALKAEIITMERRQAYLVKAAVKQAEVRLSIERERAVREERSRVDQLEELRSVAELENELLKEMVAAEQVNVKLQQKRNQALKWELLRQGGTQEKFDSIVKEVPDLGDTLRADTAHVVHEATTYGMSEAIEHVVSALGDVEEEMRQAFLARDKGRTGALPGSNFKDALRECLPNMPRAERCLLALRFARDEDQSIDYSEFLGFCRRKAQTRERQKLGLVEALAASRSVEPLGV 245
            M+ EITALKA I++ME+ Q+Y+V AAVK+   +L +ERERAV EER+R DQLEE RSVA+L+NELL EMVAAEQVNVKLQ++RN+ALKWELLRQGG QE FDSI KEVP LGDTLRADTA V+H    + M+EAIEHVV  +G+V++ +++AF+ARD GRTGAL G+ FKDAL+E  P+MPR +R LL LRF R+ DQS+DY EFL FCR KAQ+RER K+GL  ALAA+RS    G+
Sbjct:    1 MKEEITALKAHIVSMEKEQSYVVNAAVKKTAEQLVLERERAVEEERARADQLEEQRSVAQLQNELLTEMVAAEQVNVKLQERRNEALKWELLRQGGCQETFDSIAKEVPVLGDTLRADTADVLHGVAKHDMAEAIEHVVCRIGEVKDGLQEAFVARDTGRTGALGGAAFKDALKESFPDMPREDRQLLMLRFVREVDQSVDYGEFLEFCRHKAQSRERLKMGLTGALAATRSAGIAGI 238          
BLAST of mRNA_A-nodosum_M_contig840.10.1 vs. uniprot
Match: A0A835Z1F4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1F4_9STRA)

HSP 1 Score: 132 bits (332), Expect = 7.070e-28
Identity = 82/188 (43.62%), Postives = 120/188 (63.83%), Query Frame = 0
Query:   56 VDQLEELRSVAELENELLKEMVAAEQVNVKLQQKRNQALKWELLRQGGTQEKFDSIVKEVPDLGDTLRADTAHVVHEATTYGMSEAIEHVVSAL-GDVEEEMRQAFLARDKGRTGALPGSNFKDALRECLPNMPRAERCLLALRFARDEDQSIDYSEFLGFCRRKAQTRERQKLGLVEALAASRSVEP 242
            V++ ++  +V +L+N++L EMVAAEQVN +LQQ+R++ALKWELLR+G + +K  +I +E P+LG TL             + MS A+E + + + G    ++  A  ARD+G  G L   +FKDALRE  P +PR  R LLALRFAR+ED ++ Y EFL F +++A  R  Q  G + AL A+ S+ P
Sbjct:    2 VEKAQQQATVLQLKNDILTEMVAAEQVNARLQQRRSEALKWELLRRGTSADKLAAIAREAPELGATLSRSAPL---PPAPHNMSTAVEAMGALMDGPRRADVETALGARDRGGAGWLSAVDFKDALREAAPELPREGRQLLALRFAREEDDTVPYVEFLEFFKQRAARRHLQ--GAMTALRATASLSP 184          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig840.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKD6_ECTSI4.740e-15047.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JBT1_9PHAE3.890e-8865.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z1F4_9STRA7.070e-2843.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 49..89
NoneNo IPR availableGENE3D1.10.238.10coord: 92..239
e-value: 1.1E-7
score: 33.6
NoneNo IPR availableGENE3D1.10.238.10coord: 328..577
e-value: 2.2E-8
score: 35.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..893
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 730..755
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..729
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..449
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..800
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 151..186
score: 8.23694
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 153..566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig840contigA-nodosum_M_contig840:135952..147367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig840.10.1mRNA_A-nodosum_M_contig840.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig840 135040..147540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig840.10.1 ID=prot_A-nodosum_M_contig840.10.1|Name=mRNA_A-nodosum_M_contig840.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=923bp
MGITSTKMRHEITALKAEIITMERRQAYLVKAAVKQAEVRLSIERERAVR
EERSRVDQLEELRSVAELENELLKEMVAAEQVNVKLQQKRNQALKWELLR
QGGTQEKFDSIVKEVPDLGDTLRADTAHVVHEATTYGMSEAIEHVVSALG
DVEEEMRQAFLARDKGRTGALPGSNFKDALRECLPNMPRAERCLLALRFA
RDEDQSIDYSEFLGFCRRKAQTRERQKLGLVEALAASRSVEPLGVASLGG
NRALAATRASKGMTEEQKLSKNPSAYVRGIPRPEENSREQERGCPEVFKQ
GFGHQALQAKRKRVDQKFDVLVARKMTDMIHKRGKDLELMLKRADPAGAG
VIPVKQFSECLRSLNVVEVAEGNRRKKKLLLTRSDRKDLYRMWAVHGQVH
YNDFLRAGGYANSPPLRYSQSFTTDRRPSLARHNTSPPLPRSADAQGVDE
LSAPRLQGLKTDKLKAQAAWAEPRLEEADEELLPARNEVVLAHLAQVLEK
KGEETLFEEFEERDADGCRTVDEYDLMDAMAAFAPEVTTEQALDLFRARS
NEAEGSIAYDKFFKELRKRARAGVFQSGDDVQFRVEDREGRLHWVDGQVV
SRDEEDSTYTVRFKSRVPGRGYVEEYGVIEGHLRVGLRQKTPLKKTKTTV
VAELKVKAASWWTDLSKRLSRAKETGAVLVSVQLKRLLGSNRDSAKKPAT
RARADENVDSSETHDHRRSRHRRSTGPADSEASDEVSSSSRGSSASTSNT
EQRPDGFEPHQQEGLLEGDISRALPSAHSPSAASHTKKRRGSSNGSDGSD
GGRGSGRVGGSGGTEKRRTVELPEVQKVSSPPQGKLQDSSHGYHRKKPSP
SVLHRKDPAVDHFSGSGRRGTSRNATLRHGRDQRRSSGGLKSLEALGDER
IENKFDLYKKRTKAALSPEKRS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair