prot_A-nodosum_M_contig84.66.4 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig84.66.4
Unique Nameprot_A-nodosum_M_contig84.66.4
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length494
Homology
BLAST of mRNA_A-nodosum_M_contig84.66.4 vs. uniprot
Match: A0A6H5KKZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKZ7_9PHAE)

HSP 1 Score: 291 bits (746), Expect = 7.230e-91
Identity = 167/270 (61.85%), Postives = 195/270 (72.22%), Query Frame = 0
Query:  202 ALMARLEEKLGPSSETLHIIHSEMERDYYDAETRLVDPLLARVVRALKIQGHRVFGLTSNALDSVHSPKILETLSKYKIRFSPSEVRGELPRSGALVMDHPVCRGVIFIDNQQSVRHDKGEVIAEFVGLLLHC---------ARRATGN---------GTVAV---EEDLQREMVTDSGIPPKHFMRKCVLVDNTSEKCEKAAISFAQ-APAAVGAMELHTLHFTEAENLVDSPAALVQLECILGRMKARGLIGADLV-NDILVAPARSV 448
            ALMARLE KLGPSSETL +I  EMERDYY+A+ RLVDPLLARV+R+LKIQGH VFGLTSNALD VH+P+ILETL+KYKIRFS  +VRGELPRSGAL++DHPV RG+IF DNQQ+V HDKGE+IAE+VGLLL             +  G+         G V V   E    R  +  S  P +   RKCVLVDNTS+KCE+A  +FA+ A  A G +ELHTLHFTEAEN+VDSP AL QL  IL R++ RGLIG DL+  DILV P   V
Sbjct:  105 ALMARLEAKLGPSSETLRVIRQEMERDYYNADLRLVDPLLARVIRSLKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLXXXXXXXXXXVGEKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPRRP--RKCVLVDNTSKKCERAVETFARHAAMAGGGLELHTLHFTEAENMVDSPEALRQLRVILARLQERGLIGVDLIAEDILVTPVGGV 372          
BLAST of mRNA_A-nodosum_M_contig84.66.4 vs. uniprot
Match: D8LQ97_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ97_ECTSI)

HSP 1 Score: 276 bits (706), Expect = 1.240e-86
Identity = 155/246 (63.01%), Postives = 181/246 (73.58%), Query Frame = 0
Query:  225 MERDYYDAETRLVDPLLARVVRALKIQGHRVFGLTSNALDSVHSPKILETLSKYKIRFSPSEVRGELPRSGALVMDHPVCRGVIFIDNQQSVRHDKGEVIAEFVGLLLHCARRATGNGTVA-VEEDLQREMVTDSG-------------------IPPKHFMRKCVLVDNTSEKCEKAAISFAQ-APAAVGAMELHTLHFTEAENLVDSPAALVQLECILGRMKARGLIGADLV-NDILVAPARSV 448
            MERDYY+A+ +LVDPLLARV+RALKIQGH VFGLTSNALD VH+P+ILETL+KYKIRFS  +VRGELPRSGAL++DHPV RG+IF DNQQ+V HDKGE+IAE+VGLLLH ARRA      A    D  R  +++ G                   + PK   RKCVLVDNTS+KCE+AA +FA+ A AA G +ELHTLHFTEAEN+VDSP AL QL  IL R+K RGLIG DL+  DILV P   V
Sbjct:    1 MERDYYNADPKLVDPLLARVIRALKIQGHSVFGLTSNALDPVHAPRILETLAKYKIRFSAPDVRGELPRSGALMVDHPVSRGIIFGDNQQAVSHDKGEIIAEYVGLLLHNARRAVSEHVGAKTAGDAARGGLSEPGGVKVGDGESSGGRTALAGSLSPKR-PRKCVLVDNTSKKCERAAETFARHAAAAGGGLELHTLHFTEAENMVDSPEALRQLRIILARLKERGLIGVDLIAEDILVTPVGGV 245          
BLAST of mRNA_A-nodosum_M_contig84.66.4 vs. uniprot
Match: A0A835YVM2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVM2_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 3.090e-20
Identity = 55/101 (54.46%), Postives = 69/101 (68.32%), Query Frame = 0
Query:  196 STFFLRALMARLEEKLGPS----SETLHIIHSEMERDYYDAETRLVDPLLARVVRALKIQGHRVFGLTSNALDSVHSPKILETLSKYKIRFSPSEVRGELP 292
            +T+ L  L  RL E  G S    SE +  I +EMER+YYD++ +LVDPLLAR+VR LK+QGH VFGLTSN   S HS   +  L++YKIRFS   +RGELP
Sbjct:   78 TTYLLERLRTRLAET-GSSGARASEVVRKIQAEMEREYYDSDIKLVDPLLARLVRGLKVQGHHVFGLTSNEPFSEHSITTVAALAQYKIRFSDPWIRGELP 177          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig84.66.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KKZ7_9PHAE7.230e-9161.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LQ97_ECTSI1.240e-8663.01Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVM2_9STRA3.090e-2054.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig84contigA-nodosum_M_contig84:251937..268108 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig84.66.4mRNA_A-nodosum_M_contig84.66.4Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig84 251136..268353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig84.66.4 ID=prot_A-nodosum_M_contig84.66.4|Name=mRNA_A-nodosum_M_contig84.66.4|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=494bp
MQQYTVLYNYGTFTTQQSYRQYIFLLNLSDSIFFVPCSTTVVVAISQTFE
TWASSRTLSHSFIHSSIRRLSRGAIMWQPLLRVMAKQCSRVKPPRTLHSR
RALVGLAGQAGDSAGGTSGMPAVPRTFVRRVIRWTSSTSCKGTTKVRGAH
TALSSSTWTKHSSREIPVSSMVLVALVRWTYQPGSHKRRVTQDFSSTFFL
RALMARLEEKLGPSSETLHIIHSEMERDYYDAETRLVDPLLARVVRALKI
QGHRVFGLTSNALDSVHSPKILETLSKYKIRFSPSEVRGELPRSGALVMD
HPVCRGVIFIDNQQSVRHDKGEVIAEFVGLLLHCARRATGNGTVAVEEDL
QREMVTDSGIPPKHFMRKCVLVDNTSEKCEKAAISFAQAPAAVGAMELHT
LHFTEAENLVDSPAALVQLECILGRMKARGLIGADLVNDILVAPARSVGG
REKSPLLQPKETGVVAATRGSGKLIKDGRLASTADSLASHALG*
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