prot_A-nodosum_M_contig835.4.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig835.4.2
Unique Nameprot_A-nodosum_M_contig835.4.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length540
Homology
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A6H5KMN8_9PHAE (FCP1 homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN8_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 6.420e-93
Identity = 180/345 (52.17%), Postives = 216/345 (62.61%), Query Frame = 0
Query:   14 SSPWRDYFDRLLGLCQGAAE---PPSAQLFRPPAELPVTMLPRFPTEQGPAVPAVESESSQSEGCDCPSAGLGSVGTANTNGRGVSPP------PTQPSDALVLLLVDMNGTLLYRAKKPLPIFVDGGD---------GAPAFVHGDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLL----EVSCDDVRSYIANTPFRP 336
            +S WR+Y +R+ GLC  A+    PP+A L RPP  L    L     ++GP   A   E   +   DCP+ G G V   +++  G  PP              VL+L+DMNGTLL RAKKPL +  DG           GAPAFVHG+  P+ YYMRP AAE VAA+  HPR RLAFYTSMRGVNA+PAARFLM    + + A PEVYDRPFN  DP G N WDTTR+LPLIWSTP R G GFGP NTIMVDDTP+KMRFMDAGLV+VPE+TEA  +    G TG   VE+     E+   R+ AAR Q EV+PRL DY+RRLL    + S +DVR +I   PF+P
Sbjct:   55 TSHWREYLNRIAGLCDDASNAEGPPAADLIRPPNNL----LAHPQRQRGPGSIANTVEPLAA---DCPAIGCGGVTNHSSDSNGAVPPRDGHDMDVPSKHKQVLILLDMNGTLLRRAKKPLRVSNDGXXXXXXXNSTWGAPAFVHGENVPLHYYMRPGAAELVAALEAHPRARLAFYTSMRGVNALPAARFLMP---DDSSAAPEVYDRPFNARDPHGANAWDTTRDLPLIWSTPGRTGAGFGPGNTIMVDDTPRKMRFMDAGLVVVPEFTEACALEALGGETG--GVESE----EEAERREAAARAQREVLPRLLDYLRRLLRRLLDESGEDVRPFIERNPFQP 383          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: D7G8V3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8V3_ECTSI)

HSP 1 Score: 150 bits (380), Expect = 6.960e-37
Identity = 96/213 (45.07%), Postives = 123/213 (57.75%), Query Frame = 0
Query:   14 SSPWRDYFDRLLGLCQGAAEPPSAQLFRPPAELPVTMLPRFPTEQGPAVPAVESESSQSEGCDCPSAGLGSVGTANTNGRGVSPPPTQPSDAL------VLLLVDMNGTLLYRAKKPLPIFVDGGD---------GAPAFVHGDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGV-----NGAEADPEVYDRPF 206
            +SPW++  +R++GLC  A  PP A L RPP  L    L      +GP      +++++    D P+AG G V + +++  G  PP       L      VL+L+DMNGTLLYRAKKPL +  DG           GAPAFVHG+  P+ YYMRP AAE VAA+  HPR RLAFYTSMRGVNA+PAARFLM G       +G +  P +   PF
Sbjct:   54 TSPWKEKLNRIVGLCDDAG-PPVADLIRPPTNL----LAHPRRHRGPGS---ITDTAEPLAADSPAAGCGGVTSHSSDSNGAVPPRDGNDTDLPLKTKQVLILLDMNGTLLYRAKKPLRVSNDGXXXXXXXDSKWGAPAFVHGENVPLHYYMRPGAAELVAALEAHPRTRLAFYTSMRGVNALPAARFLMPGDSRLLDESGEDVRPFIERNPF 258          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A7S3K1S4_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K1S4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.400e-31
Identity = 84/239 (35.15%), Postives = 120/239 (50.21%), Query Frame = 0
Query:   98 PPTQPSDALVLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLLEVSCDDVRSYIANTPFRP 336
            P T+     +L+L+DMNGTLL R K+ L         A   ++ +     YY+R  A +F   +  HP +  AFYTSMR  +A PA R L             +Y+R FN PDP   N WDT R+L  +WSTPNR   GF P NT+++DDTP+KMR     +++VP +TE +V     G                            +V+P+L +Y+  +L+ + DD+RSYI +  F P
Sbjct:  135 PSTRIQQKKILVLLDMNGTLLVRTKRRLDY-----READCTLNDN----YYYIRENAIQFCQQLESHPAIIYAFYTSMRERSAKPATRILAPHA--------HLYERVFNKPDPFAENSWDTMRDLEKLWSTPNRPAYGFNPTNTLVIDDTPRKMREHPHNVIVVPTFTEKAVAQIGSG----------------------------DVLPQLFNYIDLMLKANLDDIRSYIRDHSFVP 328          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A7S2RHV1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RHV1_9STRA)

HSP 1 Score: 132 bits (332), Expect = 5.010e-30
Identity = 87/238 (36.55%), Postives = 115/238 (48.32%), Query Frame = 0
Query:   98 PPTQPSDALVLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDP--EGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLLEVSCDDVRSYIANTP 333
            PP   +   +L+L+DMNGTLL R K  L      G  AP F H     + Y++R    + V  +  HPR R+AFYTSMR  NA+PA + +  G         ++YDR FN  D   +G   WDT R+L  +WST ++ G GF   NT+MVDDTP+KMR      V VPE                       +EA+          R    +P L  Y+  LL+ S DDVR YI + P
Sbjct:  213 PPAAGTQRPILILLDMNGTLLIRLKGGL------GKQAPDFAHAG---LNYFIRRGTKQLVRTLLAHPRARVAFYTSMRESNALPAVKRITDG------VRVDIYDREFNVADRGHDGAKHWDTMRDLERVWSTVDKVGNGFSWHNTVMVDDTPRKMRHSPQNAVFVPEL---------------------KSEAD----------RNDNTIPELEQYLVELLDQSGDDVRHYITDNP 404          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A7S2CI38_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CI38_9STRA)

HSP 1 Score: 124 bits (312), Expect = 6.540e-28
Identity = 87/237 (36.71%), Postives = 112/237 (47.26%), Query Frame = 0
Query:   99 PTQPSDALVLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDP-EGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLLEVSCDDVRSYIANTPF 334
            P QP   L+LL  DMNGTLL R K  L          P   H     + YY R    + V+ +  HPRV LAFYTSMR  NA+PA        ++G     E+YDR FN  D  +G   WDT R++  IW+T  RAG GF  RNT+MVDD+ +KMR     LV++PE+         + GT                            M RL+ Y+  LL  + DDVR  +A+  F
Sbjct:  158 PRQPGPILILL--DMNGTLLLRLKGKLAGL------RPDLTHAG---LNYYFRAGVCDLVSMLLDHPRVVLAFYTSMRESNALPAVL-----QISGGRKRVEIYDRDFNKKDEWDGAKDWDTVRDMHKIWTTKGRAGYGFNARNTVMVDDSSRKMRQFPGNLVLIPEFKRQE---HYKDGT----------------------------MDRLSTYLSSLLSQTGDDVRPLLASEKF 347          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A7S1XU20_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XU20_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.190e-27
Identity = 76/190 (40.00%), Postives = 101/190 (53.16%), Query Frame = 0
Query:  107 VLLLVDMNGTLLYRAK-KPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAEFVAAMARH------------------PRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGG 277
            +L+L+DMNGTLL+R + K +P   +    AP   + +     YYMRP A E +  + R                   PRV++ FYTSM+  NA PA   L   G + A+A   +Y R FN  DP+G N WDT R+L  +W+   + G GF   NTIMVDDTP+KMR M      VPE+ E  V   +RGG
Sbjct:   23 ILILLDMNGTLLHRERGKKVPNAAE----APFLNNNN---TYYYMRPFAEELIGLLLRAEKGILSAAGEAPAPHPNAPRVQMGFYTSMQQSNAAPAVATLT--GESAAQAKRRIYPRAFNVADPQGKNSWDTHRDLAGVWAAQGKVGFGFSEANTIMVDDTPRKMRHMPRNAFFVPEFNEEGV---ARGG 200          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A835ZD02_9STRA (PHD-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD02_9STRA)

HSP 1 Score: 124 bits (311), Expect = 4.690e-26
Identity = 96/276 (34.78%), Postives = 128/276 (46.38%), Query Frame = 0
Query:  107 VLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVH------GDPDPVQYYMRPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAE-ADPE--------------------VYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSR---------------GGTGI-----------RTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLLEVSCDDVRSYI 329
            +L+L+DMNGT++YRAK  L     GG  A AF H        P  + YY+RP A E V  +  H RV LAFYTSMR  NA+PA     SG  NG + +D +                    +Y R +N PDP G +PW T R+L  +W+   + G GFG  NT+++DD+  KMR M   ++ V EYTEA                      G TG            RTV  +     D+         +  V+ RL D +R L E + DDVR Y+
Sbjct:   17 ILVLLDMNGTIVYRAKAQL-----GGCPA-AFTHLVGRDSRTPMRLHYYLRPHAMELVRFLRGHARVTLAFYTSMRLENALPAVEGDDSGNGNGRQLSDTDHASSNSXXXXXXXXXXLEALIYAREYNAPDPLGAHPWSTKRDLARVWTARGKPGHGFGAANTLVIDDSAAKMRHMPHNVLAVEEYTEARAXXXXXXXXXXXXXXXTSQHAGTTGCXXXXXXXXQRSRTVPLAGCSGADITP-------EDTVLLRLQDTLRDLFESAGDDVREYV 279          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: F0XVF5_AURAN (FCP1 homology domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF5_AURAN)

HSP 1 Score: 116 bits (291), Expect = 3.910e-25
Identity = 73/172 (42.44%), Postives = 95/172 (55.23%), Query Frame = 0
Query:  107 VLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAEFV-----AAMARHP---RVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASV 270
            +L+L DMNGTL++R+K  LP+         A V        YY R  A + V     AA    P   RV  AFYTSMR  NA P AR+L      G  AD  +Y+R FN  D  G N WDT R+LP +W TP +A  GF   NT+++DDT +KMR   + +++VP Y EA+V
Sbjct:  143 LLVLCDMNGTLVHRSKTVLPVSAKA-----AVVENG---THYYARDHAEDLVQFLCDAATPSDPARRRVVFAFYTSMREANAQPIARYL----TRGKRAD--MYERKFNKDDASGENAWDTMRDLPKVWGTPAKAAHGFDETNTLVIDDTHRKMREYPSNVLVVPTYDEATV 300          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A8J2WY59_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WY59_9STRA)

HSP 1 Score: 98.6 bits (244), Expect = 2.750e-18
Identity = 67/174 (38.51%), Postives = 93/174 (53.45%), Query Frame = 0
Query:  107 VLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYMRPAAAE---FVAAMAR-----HPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPEVYDRPFNTPDPEGVNPWDTTRNLPLIWST--PNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASV 270
            VL+L DMNGTL++R+K  L    +    A        +   YY RP A +   F+   AR       RV  AFYTSMR  NA P A +L  G         ++Y+R FN  DP G N +DT R+LP +WS+  P  A  GF   NT+++DDT +KMR +   +++VP + E +V
Sbjct:  275 VLVLADMNGTLVHRSKTRLTCKAEPACEA--------NKTFYYARPGAKDLIQFLLHAARTTEEGRRRVVFAFYTSMREANARPIADYLTGG------RRVDIYERKFNKADPTGANDYDTMRDLPSVWSSVKPGSA-RGFTAENTVVIDDTLRKMRELPHNVLVVPPFEEDAV 433          
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Match: A0A7S2D3W3_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D3W3_9STRA)

HSP 1 Score: 85.5 bits (210), Expect = 3.670e-16
Identity = 56/165 (33.94%), Postives = 76/165 (46.06%), Query Frame = 0
Query:  176 RGVNAVPAARFLMSGGVNGAEADP-EVYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPKKMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAARRQAEVMPRLTDYMRRLLE-----VSCDDVRSYIANTPF 334
            R  NA PA   +  G  + AE D   +YDR +N  D  G   WDT R++  IWSTP + G GF   NTIM+DDT +KMR     +++VPE+ EA                                 R+  VM  L++++ RLL+     V   DVRSY+   P 
Sbjct:    1 RESNAKPAVIKITEGMASAAELDQLTIYDRDYNAEDKSGTKSWDTMRDMHRIWSTPGKIGYGFDAGNTIMIDDTMRKMRNFPDNVIVVPEFKEA-------------------------------VHRRDNVMSELSEHLSRLLDDQRLGVGGYDVRSYLRENPL 134          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig835.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5KMN8_9PHAE6.420e-9352.17FCP1 homology domain-containing protein n=1 Tax=Ec... [more]
D7G8V3_ECTSI6.960e-3745.07Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S3K1S4_9STRA3.400e-3135.15Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A7S2RHV1_9STRA5.010e-3036.55Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CI38_9STRA6.540e-2836.71Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1XU20_9STRA1.190e-2740.00Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A835ZD02_9STRA4.690e-2634.78PHD-type domain-containing protein n=1 Tax=Tribone... [more]
F0XVF5_AURAN3.910e-2542.44FCP1 homology domain-containing protein n=1 Tax=Au... [more]
A0A8J2WY59_9STRA2.750e-1838.51Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2D3W3_9STRA3.670e-1633.94Hypothetical protein n=1 Tax=Florenciella parvula ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 283..303
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..100
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 340..415
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 376..393
IPR004274FCP1 homology domainSMARTSM00577forpap2coord: 105..272
e-value: 0.009
score: -20.4
IPR004274FCP1 homology domainPFAMPF03031NIFcoord: 108..266
e-value: 5.0E-5
score: 23.1
IPR023214HAD superfamilyGENE3D3.40.50.1000coord: 87..333
e-value: 1.5E-12
score: 49.3
IPR036412HAD-like superfamilySUPERFAMILY56784HAD-likecoord: 99..266

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig835contigA-nodosum_M_contig835:141553..143957 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig835.4.2mRNA_A-nodosum_M_contig835.4.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig835 137934..144467 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig835.4.2 ID=prot_A-nodosum_M_contig835.4.2|Name=mRNA_A-nodosum_M_contig835.4.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=540bp
MPTVPAPQSAAAFSSPWRDYFDRLLGLCQGAAEPPSAQLFRPPAELPVTM
LPRFPTEQGPAVPAVESESSQSEGCDCPSAGLGSVGTANTNGRGVSPPPT
QPSDALVLLLVDMNGTLLYRAKKPLPIFVDGGDGAPAFVHGDPDPVQYYM
RPAAAEFVAAMARHPRVRLAFYTSMRGVNAVPAARFLMSGGVNGAEADPE
VYDRPFNTPDPEGVNPWDTTRNLPLIWSTPNRAGEGFGPRNTIMVDDTPK
KMRFMDAGLVIVPEYTEASVIAFSRGGTGIRTVENSSNEAEDLRERQKAA
RRQAEVMPRLTDYMRRLLEVSCDDVRSYIANTPFRPHAPSDVAEDACAAT
PESARSAPPVSLASEKDEPKSATPATSGAAPASTTSAATAHGVDSSTVDL
AGAHHQPSAPSSTSSKSVILETISGSDRGPSCFVEAVALLLTTGPLARPL
QQTEAAMPAAKPATEWSKKASRMDPGRGVSSVGGWLDFDGLPRDLEESLV
DAVTELLRAACAAARRWELPRAHREGLEAWSALATARPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004274FCP1_dom
IPR023214HAD_sf
IPR036412HAD-like_sf