prot_A-nodosum_M_contig835.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig835.1.1
Unique Nameprot_A-nodosum_M_contig835.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length102
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5KZ04_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ04_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.380e-22
Identity = 50/97 (51.55%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:    4 PPPRTPRTMVRTEAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            PPP T       EAAGQ Y Q   F YLGG V E  D+  EI  R+R  W  +RRY REL+G+PK    LK R+++AEA+EALLYGC TW+    HY
Sbjct:  145 PPPLT------IEAAGQKYAQTTEFRYLGGLVNEHGDLTPEINYRSRGAWAYLRRYGRELFGRPKAPFRLKIRLLQAEAMEALLYGCMTWSPLSRHY 235
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5JYZ4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYZ4_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.730e-22
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   64 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 148
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5KXX8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXX8_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 5.230e-22
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   74 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 158
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5KPJ4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPJ4_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 2.600e-21
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   64 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRGHY 148
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5JLH5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH5_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 4.130e-21
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   45 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 129
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5KLX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLX9_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 4.480e-21
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG + E  D+  EI  R++A W  IRRY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   96 EAAGQRYAQTTEFRYLGGLINEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 180
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5K038_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K038_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 6.400e-21
Identity = 48/97 (49.48%), Postives = 60/97 (61.86%), Query Frame = 0 
Query:    4 PPPRTPRTMVRTEAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            P P  P T+   EAAGQ Y Q   F YLGG V E  D+  EI  R+R  W  +RRY REL+ +P+    LK R+++AEA+EALLYGC TW+    HY
Sbjct:   57 PAPPPPLTI---EAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLQAEAMEALLYGCMTWSPLSGHY 150
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5JWS4_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS4_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.350e-20
Identity = 44/85 (51.76%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:   64 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 148
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5K7X5_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X5_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.450e-20
Identity = 44/85 (51.76%), Postives = 58/85 (68.24%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  I+RY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R++HY
Sbjct:  320 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRDHY 404
[Close]
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Match: A0A6H5KA81_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA81_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 1.600e-20
Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 0 
Query:   16 EAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTRACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY 100
            EAAGQ Y Q   F YLGG V E  D+  EI  R++A W  IRRY+ EL+ +P     LK R+++AEA+EALLYGC TW+ R+ HY
Sbjct:  347 EAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIRRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHY 431
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig835.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ04_9PHAE1.380e-2251.55Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JYZ4_9PHAE4.730e-2251.76Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KXX8_9PHAE5.230e-2251.76Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KPJ4_9PHAE2.600e-2151.76Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JLH5_9PHAE4.130e-2151.76Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KLX9_9PHAE4.480e-2151.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K038_9PHAE6.400e-2149.48Reverse transcriptase domain-containing protein (F... [more]
A0A6H5JWS4_9PHAE1.350e-2051.76Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K7X5_9PHAE1.450e-2051.76Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KA81_9PHAE1.600e-2052.94Reverse transcriptase domain-containing protein n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig835contigA-nodosum_M_contig835:22462..22767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig835.1.1mRNA_A-nodosum_M_contig835.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig835 22461..22767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig835.1.1 ID=prot_A-nodosum_M_contig835.1.1|Name=mRNA_A-nodosum_M_contig835.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=102bp
MCMPPPRTPRTMVRTEAAGQIYKQVQSFTYLGGAVTETPDMPVEIARRTR
ACWMRIRRYSRELYGQPKVALSLKTRMVKAEAIEALLYGCSTWTLRQEHY
AK
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