prot_A-nodosum_M_contig828.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig828.17.1
Unique Nameprot_A-nodosum_M_contig828.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length220
Homology
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: A0A6H5LM28_9PHAE (tRNA_edit domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LM28_9PHAE)

HSP 1 Score: 125 bits (314), Expect = 4.670e-32
Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 0
Query:  128 RANIARSVFKLGLSFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADISVPRDGSGIQDE 216
            R N+  +  ++GLS SGFPHNGV+VFGGLTP+P ILSEAVL LRP+F+W+  GHPLLKLGVS  DLV++ GA VADISVPRDG G  ++
Sbjct:  135 RCNLQVAPEEVGLSLSGFPHNGVTVFGGLTPIPVILSEAVLALRPSFVWLGAGHPLLKLGVSTEDLVKKLGATVADISVPRDGPGAAED 223          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: A0A484EHU1_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EHU1_BRELC)

HSP 1 Score: 70.1 bits (170), Expect = 4.370e-11
Identity = 34/78 (43.59%), Postives = 49/78 (62.82%), Query Frame = 0
Query:  125 ASERANIARSVFKLGLSFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVA 202
            A ++ N   +  K+    +GF HNGVS FG  T +P I+S A+ +L+P+FIW+ GG  L+KL +S  DLV+   A VA
Sbjct:  129 AKKKFNFQHAPEKVSEELTGFQHNGVSTFGTKTRVPVIVSGAIADLKPSFIWLGGGAELIKLRISVQDLVQALKARVA 206          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: A0A1V9Y6Q8_9STRA (tRNA_edit domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y6Q8_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.480e-7
Identity = 29/82 (35.37%), Postives = 48/82 (58.54%), Query Frame = 0
Query:  127 ERANIARSVFKLGLSFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADISVPR 208
            ++ N   +   +    +GF  NGVS FG  TP+P I+S A+L+L   +IW+  G   +KL ++ +D++    A+V D+S PR
Sbjct:   48 KQVNFQHAATHVSDEITGFQFNGVSPFGMKTPIPVIVSSAILDL--GYIWLGAGAVDVKLRMAVTDVIRALNALVGDVSEPR 127          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: T0Q5R7_SAPDV (tRNA_edit domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0Q5R7_SAPDV)

HSP 1 Score: 60.1 bits (144), Expect = 2.180e-7
Identity = 31/82 (37.80%), Postives = 46/82 (56.10%), Query Frame = 0
Query:  127 ERANIARSVFKLGLSFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADISVPR 208
            +  N   +   +    +GF  NGVS FG  TP+P ++S A+L L   ++W+ GG   +KL  S +D+V    A+V DIS PR
Sbjct:  154 KHVNFQHAATDVSDELTGFQFNGVSPFGMKTPIPVVVSSAILPL--GYVWLGGGAVDVKLRASTADIVRALDALVGDISEPR 233          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: A0A485L9T9_9STRA (Aste57867_18340 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L9T9_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 5.890e-7
Identity = 32/82 (39.02%), Postives = 47/82 (57.32%), Query Frame = 0
Query:  127 ERANIARSVFKLGLSFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADISVPR 208
            ++ N   +   +    +GF  NGVS FG LTP+PTI+S  +L+L   +IW+ GG   +KL V+ S  V+   AI  D+S  R
Sbjct:  126 KQVNFQHAPPDISAQLTGFEFNGVSPFGMLTPLPTIVSTPILDLP--YIWLGGGAHDVKLKVAVSQCVQALAAISGDVSEAR 205          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: A0A1Z5JEK1_FISSO (tRNA_edit domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JEK1_FISSO)

HSP 1 Score: 56.2 bits (134), Expect = 4.520e-6
Identity = 28/66 (42.42%), Postives = 37/66 (56.06%), Query Frame = 0
Query:  143 SGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADISVPR 208
            +G+ HN V+ FG   P   ++  A       FIWM GGH LLKLG++ SD       +VA+IS PR
Sbjct:  146 TGYKHNSVTPFGMADPNHVLIVLAEAAASQKFIWMGGGHVLLKLGMAVSDFCRALKPVVANISQPR 211          
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Match: M2Y1V6_GALSU (Prolyl-tRNA synthetase-like protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y1V6_GALSU)

HSP 1 Score: 55.5 bits (132), Expect = 8.860e-6
Identity = 27/64 (42.19%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  141 SFSGFPHNGVSVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAIVADI 204
            S +G+P N V+  G    +P I+S A+++L P FIW+ GG   +K  V+ + LV+  GAIVA I
Sbjct:  160 SITGYPFNAVTPLGMKRRLPVIISNAIVDLDPPFIWLGGGREDVKWYVNVAQLVDAFGAIVAAI 223          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig828.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5LM28_9PHAE4.670e-3266.29tRNA_edit domain-containing protein n=2 Tax=Ectoca... [more]
A0A484EHU1_BRELC4.370e-1143.59Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A1V9Y6Q8_9STRA1.480e-735.37tRNA_edit domain-containing protein n=1 Tax=Thraus... [more]
T0Q5R7_SAPDV2.180e-737.80tRNA_edit domain-containing protein n=2 Tax=Saprol... [more]
A0A485L9T9_9STRA5.890e-739.02Aste57867_18340 protein n=1 Tax=Aphanomyces stella... [more]
A0A1Z5JEK1_FISSO4.520e-642.42tRNA_edit domain-containing protein n=2 Tax=Fistul... [more]
M2Y1V6_GALSU8.860e-642.19Prolyl-tRNA synthetase-like protein n=1 Tax=Galdie... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilyGENE3D3.90.960.10coord: 137..205
e-value: 9.2E-11
score: 43.5
IPR036754YbaK/aminoacyl-tRNA synthetase-associated domain superfamilySUPERFAMILY55826YbaK/ProRS associated domaincoord: 142..204
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 53..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig828contigA-nodosum_M_contig828:272887..279625 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig828.17.1mRNA_A-nodosum_M_contig828.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig828 270906..280901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig828.17.1 ID=prot_A-nodosum_M_contig828.17.1|Name=mRNA_A-nodosum_M_contig828.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=220bp
MGQRLRRVVEGHLPALAGVSEEGAAAEAEVLTEAEWTDLARCSHIVQAGK
GGDSTGSSPCVGEKRKTAEISQSRRGGEVGTPDSRPSSPSSVAEEGAGAS
CTFEVSFDPCSGWSPGVCEVCMAAASERANIARSVFKLGLSFSGFPHNGV
SVFGGLTPMPTILSEAVLNLRPAFIWMDGGHPLLKLGVSASDLVERQGAI
VADISVPRDGSGIQDETDL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036754YbaK/aa-tRNA-synt-asso_dom_sf