prot_A-nodosum_M_contig828.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig828.14.1
Unique Nameprot_A-nodosum_M_contig828.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length146
Homology
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: UPI0011327E8C (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI0011327E8C)

HSP 1 Score: 120 bits (300), Expect = 2.000e-31
Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            D+P T  EA    +  +W  A+K E+D      VW +VD P+G   +G K VFK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E +++E P G
Sbjct:   53 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRG 187          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 126 bits (317), Expect = 5.610e-31
Identity = 65/135 (48.15%), Postives = 85/135 (62.96%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            DEP T  EA  SPE  +W  AL+ EMD      VW +VD PKG   +G K VFK+K+  DG V+ YK R VAKGFRQI G++Y E+ SP     SIR++LA+ A  D+E  Q+DV+ AFL   + E++Y+  P G
Sbjct:  444 DEPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYEIWQMDVKTAFLNGKLEEDVYMTQPEG 578          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6P275_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6P275_9ASTR)

HSP 1 Score: 124 bits (312), Expect = 8.590e-31
Identity = 62/134 (46.27%), Postives = 86/134 (64.18%), Query Frame = 0
Query:   12 EPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            EP T  +A  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y +S SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  284 EPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDSYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 417          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6PKD3_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6PKD3_9ASTR)

HSP 1 Score: 125 bits (315), Expect = 1.010e-30
Identity = 64/144 (44.44%), Postives = 92/144 (63.89%), Query Frame = 0
Query:    3 TGLASYLPD-EPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            T   +Y+ + EP T  EA  S E PQW+ A+K E+D  +   +W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  281 TDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHIWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 424          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6NFL8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFL8_9ASTR)

HSP 1 Score: 124 bits (312), Expect = 1.360e-30
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    3 TGLASYLPD-EPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            T   +Y+ + EP T  EA  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  125 TDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 268          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6MBP8_9ASTR (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6MBP8_9ASTR)

HSP 1 Score: 125 bits (313), Expect = 1.580e-30
Identity = 64/144 (44.44%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    2 PTGLASYLPDEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            P  L   +  EP T  EA  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  125 PDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 268          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: UPI000D464853 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI000D464853)

HSP 1 Score: 120 bits (300), Expect = 1.830e-30
Identity = 61/135 (45.19%), Postives = 84/135 (62.22%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            D+P T  EA    +  +W  A+K E+D      VW +VD P+G   +G K VFK+K+G DG+VE YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E  Q+DV+ AFL   + E +++E P G
Sbjct:   58 DDPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGYIEENIFMEQPRG 192          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6NTS6_9ASTR (Integrase catalytic domain-containing protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NTS6_9ASTR)

HSP 1 Score: 124 bits (312), Expect = 1.830e-30
Identity = 64/144 (44.44%), Postives = 91/144 (63.19%), Query Frame = 0
Query:    3 TGLASYLPD-EPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            T   +Y+ + EP T  EA  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  198 TDFLTYMVEGEPQTYREAVTSSEGPQWKEAIKNEIDSILQNHTWELVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGLDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 341          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A5N6NLM6_9ASTR (Uncharacterized protein n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NLM6_9ASTR)

HSP 1 Score: 125 bits (313), Expect = 1.980e-30
Identity = 63/144 (43.75%), Postives = 89/144 (61.81%), Query Frame = 0
Query:    2 PTGLASYLPDEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            P  L   +  EP T  +A  S E PQW+ A+K E+D  +    W++VD P G   LG + +FKRK+  DG ++KYK R V KGFRQ +G+ Y ++ SP    +SIR+ LA+ AL + E  Q+DV+ AFL  D+ EE+Y+E P G
Sbjct:  759 PDFLTYMVEGEPQTYRDAVTSSEGPQWKEAIKNEIDSILQNHTWEIVDLPPGCKPLGYRWIFKRKMKADGSIDKYKARLVIKGFRQKEGVDYFDTYSPVTRITSIRLVLAIAALRNLEVHQMDVKTAFLNGDLEEEIYMEQPEG 902          
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Match: A0A2I0IJP3_PUNGR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Punica granatum TaxID=22663 RepID=A0A2I0IJP3_PUNGR)

HSP 1 Score: 122 bits (306), Expect = 2.110e-30
Identity = 60/135 (44.44%), Postives = 86/135 (63.70%), Query Frame = 0
Query:   11 DEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDRPKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTG 145
            D+PTT  EA    +  +W  A+K EMD      VW +VD P+G   +G K VFKRK+G DG+VE YK R VAKG+RQ +G+ Y+E+ SP     S+R+ LA+ A  D+E  Q+DV+ AFL   + E+++++ P G
Sbjct:   74 DDPTTYEEAISDIDSSKWLEAMKSEMDSMSKNQVWDLVDPPEGIVPIGNKWVFKRKIGADGKVETYKARLVAKGYRQKQGVDYEETFSPVAMLKSLRIMLAIAAHYDYEVWQMDVKTAFLNVSIEEDIFMDQPKG 208          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig828.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0011327E8C2.000e-3145.19hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A8J5YBS1_9ROSI5.610e-3148.15Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
A0A5N6P275_9ASTR8.590e-3146.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6PKD3_9ASTR1.010e-3044.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6NFL8_9ASTR1.360e-3044.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A5N6MBP8_9ASTR1.580e-3044.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI000D4648531.830e-3045.19hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A5N6NTS6_9ASTR1.830e-3044.44Integrase catalytic domain-containing protein n=1 ... [more]
A0A5N6NLM6_9ASTR1.980e-3043.75Uncharacterized protein n=1 Tax=Mikania micrantha ... [more]
A0A2I0IJP3_PUNGR2.110e-3044.44Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 44..145
e-value: 3.4E-26
score: 92.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 12..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig828contigA-nodosum_M_contig828:252211..252648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig828.14.1mRNA_A-nodosum_M_contig828.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig828 252211..252648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig828.14.1 ID=prot_A-nodosum_M_contig828.14.1|Name=mRNA_A-nodosum_M_contig828.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=146bp
MPTGLASYLPDEPTTLHEAKVSPEWPQWRGALKREMDGQIARGVWKVVDR
PKGKTVLGTKTVFKRKVGQDGRVEKYKCRFVAKGFRQIKGIHYQESSSPT
PTQSSIRMALAVMALLDWEGRQLDVEMAFLEADVTEELYVELPTGI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2