prot_A-nodosum_M_contig828.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig828.1.1
Unique Nameprot_A-nodosum_M_contig828.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length220
Homology
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: D8LTR9_ECTSI (Mitochondrial inner membrane protease subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR9_ECTSI)

HSP 1 Score: 189 bits (479), Expect = 8.930e-57
Identity = 92/163 (56.44%), Postives = 113/163 (69.33%), Query Frame = 0
Query:   57 SGAHRSWEWQALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            SG+  SW  +    + ++ W VC   C+ EYVVEP  V GPSM PTI H S++ ++KM GR  +++ G IV+ QSP E GR+VVKRV GLPGD I VRP  W V +S  IEKR EVVPEGHVWL GDN +NS DSRN+G+VPQALV G V LR+WP  D G +
Sbjct:   71 SGSSSSWGHEGAKFVRQMAWFVCAYQCLREYVVEPCLVHGPSMRPTIEHNSLLLINKMGGRGRTIEAGQIVLVQSPLEIGRLVVKRVTGLPGDSISVRPPEWDVYNSQGIEKRSEVVPEGHVWLAGDNVDNSKDSRNFGSVPQALVLGTVLLRVWPTKDFGFI 233          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: A0A8C5QJF3_9ANUR (Mitochondrial inner membrane protease subunit n=1 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5QJF3_9ANUR)

HSP 1 Score: 137 bits (346), Expect = 1.340e-37
Identity = 70/154 (45.45%), Postives = 93/154 (60.39%), Query Frame = 0
Query:   66 QALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            +A+  LG      C+AHC  EY+ E    +GPSMEPTIR   V+  D +     S+  GD+V+A+SP +P   + KRV+GL GD I          +  ++ KR   VP+GHVWLEGDN  NSTDSR YG VP AL+ G +F+RIWPF   G++
Sbjct:    8 RAVGFLGYAIQYGCIAHCTFEYIGEFVICSGPSMEPTIRDYDVLLCDNLSRHLYSIHKGDVVIAKSPNKPEINICKRVIGLEGDKICTS-------NPSDLIKRHTYVPKGHVWLEGDNLQNSTDSRTYGPVPYALIRGRIFMRIWPFASFGVL 154          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: A0A8K0NT58_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0NT58_LADFU)

HSP 1 Score: 135 bits (341), Expect = 6.330e-37
Identity = 65/140 (46.43%), Postives = 87/140 (62.14%), Query Frame = 0
Query:   79 CVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGL 218
            C+AHC  E++       GPSMEPTI+  +V+  + +  R   ++ GDIV+A+SP  P   + KRV+ LPGD +      WG+  S       +VVP G+VWLEGDNKNNSTDSRNYG VPQ L+ G    ++WPF + GL
Sbjct:   23 CIAHCTFEFIGNFTVCIGPSMEPTIQSKNVILTENITPRLRRIRKGDIVIARSPSNPREKICKRVIALPGDRVS-----WGLFYS-------DVVPRGYVWLEGDNKNNSTDSRNYGPVPQGLILGRAVCKVWPFQEIGL 150          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: A0A7S0N2K5_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0N2K5_9CRYP)

HSP 1 Score: 136 bits (343), Expect = 7.380e-37
Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 0
Query:   66 QALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIR-HMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAG 217
            + +  +G +T   C+ HCI EYV++     GPSM PT      VV V+    RS+SL +GD+VVA+SP  P + V KR+VG+PGD +Q  P  +  +S      R  +VP GHVWL+GDN  NSTDSR+YGAVP AL+ G VF ++WP+ + G
Sbjct:   41 EVITQVGLVTQFSCILHCIHEYVMDITICVGPSMLPTFNMEGDVVLVEFHSKRSNSLSVGDVVVARSPTNPRQSVCKRIVGMPGDIVQAPPA-YSFQSP-----RHHLVPAGHVWLQGDNLANSTDSRSYGAVPIALIRGRVFYKVWPWPERG 187          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: A0A821ZCZ7_9NEOB (Mitochondrial inner membrane protease subunit n=3 Tax=Hyloidea TaxID=8417 RepID=A0A821ZCZ7_9NEOB)

HSP 1 Score: 134 bits (338), Expect = 2.070e-36
Identity = 69/152 (45.39%), Postives = 91/152 (59.87%), Query Frame = 0
Query:   66 QALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAG 217
            + L  LG      C+AHC  EY+ E    +GPSMEPTI++  ++  D +     S+  GDIV+A+SP +P   + KRV+GL GD +          S  +  KR   VP+GHVWLEGDN +NSTDSR+YG VP AL+ G V LR+WPF   G
Sbjct:    8 KTLGFLGYAIQYGCIAHCTFEYLGEIVVCSGPSMEPTIQNYDILVCDNLSRHLYSIHKGDIVIAKSPNKPSINICKRVIGLEGDKVCTS-------SPSDFIKRHTYVPKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRVCLRLWPFNSFG 152          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: A0A6P7XVK6_9AMPH (Mitochondrial inner membrane protease subunit n=2 Tax=Gymnophiona TaxID=8445 RepID=A0A6P7XVK6_9AMPH)

HSP 1 Score: 134 bits (337), Expect = 3.020e-36
Identity = 66/154 (42.86%), Postives = 93/154 (60.39%), Query Frame = 0
Query:   66 QALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            + L  LG      C+AHC  EY+ E    +GPSMEPTI++  VV  + +     S++ GDI++A+SP +P   + KRV+GL GD + V            + K+   VP+GHVWLEGDN  NSTDSR+YG VP AL++G +FL++WP    G +
Sbjct:    8 KTLGFLGYTVQYGCIAHCAFEYLGEIVVCSGPSMEPTIKNYDVVISENLSRHFYSIQKGDIIIAKSPNDPRTNICKRVIGLEGDKVCVS-------DPSHLLKKHSYVPKGHVWLEGDNLKNSTDSRSYGPVPYALIKGRIFLKVWPLNAFGFL 154          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: UPI00112DC7D0 (mitochondrial inner membrane protease subunit 1 n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112DC7D0)

HSP 1 Score: 134 bits (337), Expect = 3.020e-36
Identity = 68/154 (44.16%), Postives = 94/154 (61.04%), Query Frame = 0
Query:   66 QALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            ++L  LG      C+AHC  EY+ E    +GPSMEPTI++  VV  + +     S++ GDIV+A+SP +P   + KRV+GL GD + V           ++ K+   VP+GHVWLEGDN  NSTDSR YG VP AL++G + L+IWP  D G +
Sbjct:    8 KSLGILGYTLQYGCIAHCAFEYLGEIVVCSGPSMEPTIKNYDVVISESLSRHLFSIQKGDIVIAKSPNDPNTNICKRVIGLEGDKVCVS-------HPSDLLKKHSYVPKGHVWLEGDNLKNSTDSRFYGPVPYALIKGRICLKIWPLNDFGFL 154          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: IMP1L_XENTR (Mitochondrial inner membrane protease subunit 1 n=4 Tax=Xenopus TaxID=8353 RepID=IMP1L_XENTR)

HSP 1 Score: 134 bits (336), Expect = 4.400e-36
Identity = 66/139 (47.48%), Postives = 87/139 (62.59%), Query Frame = 0
Query:   79 CVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAG 217
            C+AHC  EY+ E    +GPSMEPTIR+  V+  D +     S+  GDI+VA+SP +P   + KRV+GL GD + +        S   + KR   VP+GHVWLEGDN +NSTDSR+YG VP AL+ G + LR+WP    G
Sbjct:   21 CIAHCAFEYIGEVVICSGPSMEPTIRNYDVLLCDNLSRHFFSIHKGDIIVAKSPDKPSVNICKRVIGLEGDKVCMS-------SPSALLKRHTYVPKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLESFG 152          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: UPI001CF9E3EB (mitochondrial inner membrane protease subunit 1 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CF9E3EB)

HSP 1 Score: 132 bits (333), Expect = 1.210e-35
Identity = 70/159 (44.03%), Postives = 95/159 (59.75%), Query Frame = 0
Query:   61 RSWEWQALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            RS   +AL  +G      C+AHC  EY+ E    +GPSMEPTIR+  VV  +K+      ++ GDIV+A+SP +P   + KRV+GL GD +          +  +I K  + V +GHVWLEGDN  NSTDSR+YG VP AL+ G V L+IWP  + G +
Sbjct:    3 RSIVGKALGFIGYTVQYGCIAHCAFEYLAEIVVCSGPSMEPTIRNYDVVISEKLSRHFYRIQKGDIVIAKSPNDPRTNICKRVIGLEGDKVCTS-------NPSDIFKSCKYVSKGHVWLEGDNLENSTDSRSYGPVPYALIRGRVCLKIWPPQEVGFL 154          
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Match: UPI000854F31F (mitochondrial inner membrane protease subunit 1 n=1 Tax=Nanorana parkeri TaxID=125878 RepID=UPI000854F31F)

HSP 1 Score: 132 bits (333), Expect = 1.210e-35
Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 0
Query:   65 WQALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSMEPTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDFIQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQALVEGVVFLRIWPFGDAGLM 219
            W++L   G      C+AHC  EY+ E    +GPSMEPTI++  V+  + +     S+  GD+++A+SP +P   + KRV+G+ GD +             ++ KR   VP+GHVWLEGDN  NSTDSR+YG VP AL+ G V  RIWPF   G +
Sbjct:    7 WKSLGFFGYAIQYGCIAHCTFEYIGEIVICSGPSMEPTIQNYDVLMCENISRHLYSIHKGDVIIAKSPNKPNINICKRVIGMEGDKVCTS-------GPSDLLKRHTYVPKGHVWLEGDNLKNSTDSRSYGPVPYALIRGRVCFRIWPFHSLGTL 154          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig828.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTR9_ECTSI8.930e-5756.44Mitochondrial inner membrane protease subunit n=2 ... [more]
A0A8C5QJF3_9ANUR1.340e-3745.45Mitochondrial inner membrane protease subunit n=1 ... [more]
A0A8K0NT58_LADFU6.330e-3746.43Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A7S0N2K5_9CRYP7.380e-3746.41Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A821ZCZ7_9NEOB2.070e-3645.39Mitochondrial inner membrane protease subunit n=3 ... [more]
A0A6P7XVK6_9AMPH3.020e-3642.86Mitochondrial inner membrane protease subunit n=2 ... [more]
UPI00112DC7D03.020e-3644.16mitochondrial inner membrane protease subunit 1 n=... [more]
IMP1L_XENTR4.400e-3647.48Mitochondrial inner membrane protease subunit 1 n=... [more]
UPI001CF9E3EB1.210e-3544.03mitochondrial inner membrane protease subunit 1 n=... [more]
UPI000854F31F1.210e-3541.94mitochondrial inner membrane protease subunit 1 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 173..192
score: 53.45
coord: 87..103
score: 40.62
coord: 139..151
score: 54.58
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 77..154
e-value: 1.5E-16
score: 58.7
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 84..217
e-value: 3.1E-33
score: 116.4
NoneNo IPR availablePIRSRPIRSR600223-1PIRSR600223-1coord: 24..215
e-value: 3.1E-45
score: 152.5
NoneNo IPR availablePANTHERPTHR12383:SF16MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 1coord: 59..215
NoneNo IPR availablePANTHERPTHR12383PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATEDcoord: 59..215
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 75..154
e-value: 7.4E-17
score: 61.8
coord: 170..211
e-value: 1.7E-9
score: 37.9
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 90..206
e-value: 2.745E-24
score: 89.9523
IPR019757Peptidase S26A, signal peptidase I, lysine active sitePROSITEPS00760SPASE_I_2coord: 141..153
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 87..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig828contigA-nodosum_M_contig828:6323..27194 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig828.1.1mRNA_A-nodosum_M_contig828.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig828 6269..28254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig828.1.1 ID=prot_A-nodosum_M_contig828.1.1|Name=mRNA_A-nodosum_M_contig828.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=220bp
MSVFGVGLGKACAIRRMQLLKRQSGRACEVAKITVRDARQQQVLSSRSSS
NRSGASSGAHRSWEWQALAGLGELTWVVCVAHCIVEYVVEPYTVAGPSME
PTIRHMSVVAVDKMRGRSDSLKLGDIVVAQSPPEPGRMVVKRVVGLPGDF
IQVRPLPWGVRSSIEIEKRLEVVPEGHVWLEGDNKNNSTDSRNYGAVPQA
LVEGVVFLRIWPFGDAGLM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000223Pept_S26A_signal_pept_1
IPR019533Peptidase_S26
IPR019757Pept_S26A_signal_pept_1_Lys-AS
IPR036286LexA/Signal_pep-like_sf