prot_A-nodosum_M_contig8276.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8276.1.1
Unique Nameprot_A-nodosum_M_contig8276.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length94
Homology
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BLAST of mRNA_A-nodosum_M_contig8276.1.1 vs. uniprot
Match: D7G0B7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B7_ECTSI)

HSP 1 Score: 51.6 bits (122), Expect = 1.710e-5
Identity = 34/90 (37.78%), Postives = 43/90 (47.78%), Query Frame = 0 
Query:    2 YCVSEEIFDEVHPADATWLCDLSGDGSVSVDYVEVSDTDLAVTCGCSR------------KTPTPTSIPGSEQDVDIGYLSTTLSASVTV 79
            YC S E    VHPADATW CDL G G     Y +V+  +++ TCGC+             ++P  TS P   +  D G L   LS S  V
Sbjct:  632 YCYSNEQGILVHPADATWRCDLDGTGV----YSDVTAEEVSFTCGCTGTPAPAPGPIATPESPAGTSPPIEPESDDGGILGRRLSTSALV 717
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8276.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G0B7_ECTSI1.710e-537.78Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8276contigA-nodosum_M_contig8276:14789..15427 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8276.1.1mRNA_A-nodosum_M_contig8276.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8276 14315..15427 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8276.1.1 ID=prot_A-nodosum_M_contig8276.1.1|Name=mRNA_A-nodosum_M_contig8276.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=94bp
FYCVSEEIFDEVHPADATWLCDLSGDGSVSVDYVEVSDTDLAVTCGCSRK
TPTPTSIPGSEQDVDIGYLSTTLSASVTVGVGLAATVVHVLGF*
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