prot_A-nodosum_M_contig826.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig826.10.1
Unique Nameprot_A-nodosum_M_contig826.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length72
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig826.10.1 vs. uniprot
Match: A0A6H5JK41_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK41_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 2.220e-17
Identity = 40/73 (54.79%), Postives = 54/73 (73.97%), Query Frame = 0 
Query:    1 AHHGRLNTSGGIDLICNKDVTPQNFPGRVTAMANVGATSSSA--KRISSPMMSDVPHKGSTRGFHDNVVRFAI 71
            AHH      GG++  CN  VTPQ+F G+++A ++ G+T S+A  +RI SP+M DVPHKG TRG+HDNVV+FAI
Sbjct:  746 AHHNASGDGGGMNFTCNDTVTPQSFTGKLSAGSSDGSTWSTASGRRIPSPLMGDVPHKGVTRGYHDNVVQFAI 818
[Close]
BLAST of mRNA_A-nodosum_M_contig826.10.1 vs. uniprot
Match: D7FZ29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ29_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 3.620e-16
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:    1 AHHGRLNTSGGIDLICNKDVTPQNFPGRVTAMANVGATSSSA--KRISSPMMSDVPHKGSTRGFHDNVVRFAI 71
            AHH      GG++  CN  VTPQ+F GR +A ++ G+T S+A  +RI SP+M DVP KG TRG+HDNVV+FAI
Sbjct:  245 AHHNGCGDGGGMNFTCNDTVTPQSFTGRRSAGSSDGSTWSTASGRRIPSPLMGDVPRKGVTRGYHDNVVQFAI 317
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig826.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JK41_9PHAE2.220e-1754.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZ29_ECTSI3.620e-1654.79Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig826contigA-nodosum_M_contig826:40011..40226 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig826.10.1mRNA_A-nodosum_M_contig826.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig826 40011..40226 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig826.10.1 ID=prot_A-nodosum_M_contig826.10.1|Name=mRNA_A-nodosum_M_contig826.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=72bp
AHHGRLNTSGGIDLICNKDVTPQNFPGRVTAMANVGATSSSAKRISSPMM
SDVPHKGSTRGFHDNVVRFAI*
back to top