prot_A-nodosum_M_contig8253.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8253.1.1
Unique Nameprot_A-nodosum_M_contig8253.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length171
Homology
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BLAST of mRNA_A-nodosum_M_contig8253.1.1 vs. uniprot
Match: A0A7S1T2I4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T2I4_9CHLO)

HSP 1 Score: 51.2 bits (121), Expect = 2.300e-5
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0 
Query:    2 RGCPWDRFTCSLAARGGHLRLLQWARSQ 29
            +GCPW+  TCSLAA GGHL +LQWARS+
Sbjct:    1 QGCPWNEGTCSLAAGGGHLEVLQWARSE 28
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8253.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1T2I4_9CHLO2.300e-571.43Hypothetical protein (Fragment) n=1 Tax=Tetraselmi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 8..170
e-value: 6.5E-10
score: 40.1
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 5..167
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 5..167
NoneNo IPR availableSUPERFAMILY140860Pseudo ankyrin repeat-likecoord: 55..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8253contigA-nodosum_M_contig8253:4365..4877 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8253.1.1mRNA_A-nodosum_M_contig8253.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8253 4365..4907 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8253.1.1 ID=prot_A-nodosum_M_contig8253.1.1|Name=mRNA_A-nodosum_M_contig8253.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=171bp
MRGCPWDRFTCSLAARGGHLRLLQWARSQGCPWDASTCSSAAASGHLDIL
KWARTEGCPWDSATCSAAAEGGHLDVLRWARRQLCPWNAFTCGYAAMWGH
LDVLKWARSEGCPWSPSACSWAAGRGHLDVLKWASAQGCPWNKSFCAGCA
RSRGRQEVVNWIREQQLQAE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf