prot_A-nodosum_M_contig825.5.5 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig825.5.5
Unique Nameprot_A-nodosum_M_contig825.5.5
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length250
Homology
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5JSB2_9PHAE (DUF4440 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JSB2_9PHAE)

HSP 1 Score: 237 bits (605), Expect = 2.990e-75
Identity = 133/227 (58.59%), Postives = 150/227 (66.08%), Query Frame = 0
Query:   27 AFLRSPQTRVACTW---RPGALRC---KTTPKL---NGEGQTTTRKEAIEEMSTVASVIAASGATLINNPASANAALRFAASVLQEDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRDPSSPTGWTIVEHHSSVMPRSPAQLKHAK 244
            AFL  P T     W    P ++R    +  P+     G G   T +  + + +  A    A G T +    SA AA      V + DR+GVE+T I WK+ VT GT DAP KTA LYA D VLWGTVSEEVRDTPEEI+DYFDYFARLP LRLSE+TPVSLRVYGDFAT+AGTYTF WQG DG   EKRARFSFTFR DP SPT WTIVEHHSS MP SP QLKH +
Sbjct:   23 AFLAVPSTAPQAVWPAPSPSSVRRWNNRPRPRAWMSEGSGAPATTRRDMFQAAGAAIAATAMGLTAVPVTRSAGAA------VTEGDRKGVEQTTIRWKEMVTLGTPDAPRKTADLYAVDGVLWGTVSEEVRDTPEEIYDYFDYFARLPNLRLSEFTPVSLRVYGDFATEAGTYTFKWQGEDGVPKEKRARFSFTFRSDPESPTSWTIVEHHSSSMPTSPLQLKHVR 243          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: D7FN21_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN21_ECTSI)

HSP 1 Score: 227 bits (578), Expect = 4.280e-67
Identity = 114/153 (74.51%), Postives = 125/153 (81.70%), Query Frame = 0
Query:   97 AASVLQEDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLKHAKNIAE 248
            AA   +ED+  V  T ++WKDTVTSGT DAP KTAALYA D VLWGTVSEEVRDTPE+I+ YFDYFARLP+LRL EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SPT WTIVEHHSS MP +PA LK     AE
Sbjct:  126 AAPTEEEDKAAVAATTVVWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRLVEYTPVAVRVYGDFAVQAGTYTFAFQGADGATVEKRARFSFTFRRDHPESPTPWTIVEHHSSSMPNAPAGLKRVGPNAE 278          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5K0Z5_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0Z5_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.620e-66
Identity = 107/142 (75.35%), Postives = 121/142 (85.21%), Query Frame = 0
Query:  104 DRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLKHAK 244
            D++ V ET I+WKDTVT GT DAP KTAALYAPD+VLWGTVSEEVR+TPE+I+DYFD+FARLPKLRL EYTP  +RVYG+FA QAGTYTFAW+G DG T EKRARFSFTFRR  P SP  WTIVEHHSS MP +PA+LKH +
Sbjct:  322 DQKAVAETTIVWKDTVTLGTDDAPKKTAALYAPDAVLWGTVSEEVRETPEQIYDYFDFFARLPKLRLLEYTPAPVRVYGEFAVQAGTYTFAWEGDDGDTVEKRARFSFTFRRGKPGSPRPWTIVEHHSSSMPDAPAELKHVE 463          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5JT29_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JT29_9PHAE)

HSP 1 Score: 219 bits (557), Expect = 2.250e-65
Identity = 106/144 (73.61%), Postives = 122/144 (84.72%), Query Frame = 0
Query:  104 DRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLKHAKNI 246
            D++ V +T ++WK+TVTSGT DAP KTAALYA D+VLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SP  WTIVEHHSS MP +PA LK    +
Sbjct:  113 DQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDAVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLKRVGKL 256          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: D7FUF8_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF8_ECTSI)

HSP 1 Score: 220 bits (560), Expect = 1.470e-64
Identity = 107/140 (76.43%), Postives = 121/140 (86.43%), Query Frame = 0
Query:  103 EDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLK 241
            ED++ V +T ++WK+TVTSGT DAP KTAALYA D VLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SP  WTIVEHHSS MP +PA LK
Sbjct:  127 EDQKAVADTTLVWKETVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAIQAGTYTFAFQGADGATVEKRARFSFTFRRDRPGSPQPWTIVEHHSSSMPTAPAGLK 266          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: D7FUF9_ECTSI (Similar to Uncharacterized protein conserved in bacteria with a cystatin-like fold n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUF9_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 9.920e-64
Identity = 106/140 (75.71%), Postives = 117/140 (83.57%), Query Frame = 0
Query:  103 EDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLK 241
            EDRR V ET +LWKDTVTSGT DAP KTAALYAPD  LWGTVSEEVRDTP++I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTF+WQ  DG   EKRARFSFTFRRD P +   WTIVEHHSS MP +PA LK
Sbjct:  171 EDRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGAIVEKRARFSFTFRRDNPGTERPWTIVEHHSSSMPTAPAGLK 310          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5JX02_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX02_9PHAE)

HSP 1 Score: 215 bits (548), Expect = 1.520e-63
Identity = 104/139 (74.82%), Postives = 116/139 (83.45%), Query Frame = 0
Query:  104 DRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLK 241
            DRR V ET +LWKDTVTSGT DAP KTAALYAPD  LWGTVSEEVRDTP++I+ YFDYFARLP+L++ EYTPV++RVYGDFA QAGTYTF+WQ  DG   EKRARFSFTFRRD P +   WTIVEHHSS MP +PA LK
Sbjct:   27 DRRAVAETTVLWKDTVTSGTYDAPKKTAALYAPDGTLWGTVSEEVRDTPQQIYAYFDYFARLPELKVVEYTPVAVRVYGDFAVQAGTYTFSWQADDGTIVEKRARFSFTFRRDNPGTDRPWTIVEHHSSSMPTAPAGLK 165          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5LB09_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB09_9PHAE)

HSP 1 Score: 222 bits (566), Expect = 9.490e-63
Identity = 111/146 (76.03%), Postives = 121/146 (82.88%), Query Frame = 0
Query:  104 DRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRRD-PSSPTGWTIVEHHSSVMPRSPAQLKHAKNIAE 248
            D+  V  T I+WKDTVTSGT DAP KTAALYA D VLWGTVSEEVRDTPE+I+ YFDYFARLP+LR+ EYTPV++RVYGDFA QAGTYTFA+QGADG T EKRARFSFTFRRD P SPT WTIVEHHSS MP +PA LK     AE
Sbjct: 1258 DKAAVAATTIIWKDTVTSGTYDAPKKTAALYAEDGVLWGTVSEEVRDTPEQIYAYFDYFARLPELRVVEYTPVAVRVYGDFAVQAGTYTFAFQGADGETVEKRARFSFTFRRDHPGSPTPWTIVEHHSSSMPNAPAGLKRVGPNAE 1403          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A6H5JTS4_9PHAE (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JTS4_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 1.350e-55
Identity = 98/156 (62.82%), Postives = 115/156 (73.72%), Query Frame = 0
Query:   99 SVLQEDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGT------------VSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADGGTTEKRARFSFTFRR-DPSSPTGWTIVEHHSSVMPRSPAQLK 241
            S  +E+ R V ET + W +TVT GT DAP +TA LYAPD++LWGT            VSE VRDTPE+I+ YFDYFARLP+L++ EYTP  +RVYGDFA QAG+YTF+WQG DG T E RARFSFTFRR  PSSP  WTIVEHHSS MP SP +L+
Sbjct:  203 SFAEEETRSVSETTLAWTETVTRGTYDAPKRTAELYAPDAILWGTEVCGXXXXXXXTVSETVRDTPEQIYAYFDYFARLPELKVVEYTPAPVRVYGDFAAQAGSYTFSWQGTDGSTVEMRARFSFTFRRAGPSSPQPWTIVEHHSSSMPTSPLELE 358          
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Match: A0A836CEG0_9STRA (DUF4440 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEG0_9STRA)

HSP 1 Score: 178 bits (451), Expect = 2.100e-53
Identity = 86/131 (65.65%), Postives = 101/131 (77.10%), Query Frame = 0
Query:  114 LWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRDTPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQ-GADGGTTEKRARFSFTFRRDPSSPTGWTIVEHHSSVMPRSPAQLKHA 243
            LW  TVTSGT++A   TA LYAPD VLWGT+SEEVRDTP EIFDYFDYFA  P LR+S Y P+ +RV GD A   G YTF W  G+ GGT  KRAR+SF +RRDP +PTGWTI++HHSS MP +PA+L+HA
Sbjct:    8 LWLRTVTSGTANAARDTAQLYAPDGVLWGTLSEEVRDTPAEIFDYFDYFANKPHLRVSGYRPL-IRVDGDVALNTGYYTFTWDDGSSGGTASKRARYSFVYRRDPLAPTGWTIIDHHSSAMPDAPAKLRHA 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig825.5.5 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JSB2_9PHAE2.990e-7558.59DUF4440 domain-containing protein n=2 Tax=Ectocarp... [more]
D7FN21_ECTSI4.280e-6774.51Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5K0Z5_9PHAE3.620e-6675.35PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6H5JT29_9PHAE2.250e-6573.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUF8_ECTSI1.470e-6476.43Similar to Uncharacterized protein conserved in ba... [more]
D7FUF9_ECTSI9.920e-6475.71Similar to Uncharacterized protein conserved in ba... [more]
A0A6H5JX02_9PHAE1.520e-6374.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5LB09_9PHAE9.490e-6376.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JTS4_9PHAE1.350e-5562.82PDZ domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CEG0_9STRA2.100e-5365.65DUF4440 domain-containing protein n=1 Tax=Tribonem... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027843Domain of unknown function DUF4440PFAMPF14534DUF4440coord: 117..225
e-value: 6.4E-19
score: 68.4
NoneNo IPR availableGENE3D3.10.450.50coord: 95..246
e-value: 1.9E-30
score: 107.7
IPR032710NTF2-like domain superfamilySUPERFAMILY54427NTF2-likecoord: 127..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig825contigA-nodosum_M_contig825:32316..123636 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig825.5.5mRNA_A-nodosum_M_contig825.5.5Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig825 30604..123898 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig825.5.5 ID=prot_A-nodosum_M_contig825.5.5|Name=mRNA_A-nodosum_M_contig825.5.5|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=250bp
MGHLSVYRRCMGCLVALLALQSELAMAFLRSPQTRVACTWRPGALRCKTT
PKLNGEGQTTTRKEAIEEMSTVASVIAASGATLINNPASANAALRFAASV
LQEDRRGVEETAILWKDTVTSGTSDAPDKTAALYAPDSVLWGTVSEEVRD
TPEEIFDYFDYFARLPKLRLSEYTPVSLRVYGDFATQAGTYTFAWQGADG
GTTEKRARFSFTFRRDPSSPTGWTIVEHHSSVMPRSPAQLKHAKNIAES*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027843DUF4440
IPR032710NTF2-like_dom_sf