prot_A-nodosum_M_contig8238.5.1 (polypeptide) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 85.1 bits (209), Expect = 4.560e-16 Identity = 52/124 (41.94%), Postives = 66/124 (53.23%), Query Frame = 0
Query: 2 GVCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCII----ESASTCSNGVIGVEARGAXXXXXXXXXXXXXXXXXXXEAGLTADDCCVGRIMDSDVFCDDSGTAPCII 121
GVCC ECGTCGG+GCGSR GLT DCC I + N C V+K APC+I E+ TCSNGV A+G GL+ D+CC +I ++ CDD +APC++
Sbjct: 35 GVCCPVECGTCGGTGCGSR---PGLTKYDCCTSTIKEDNHLCSVTKEAPCVIDEETEADPTCSNGV----AKG--DICCSAGCGYCGGTGCAGRGGLSGDECCTSKIAAANKSCDDQ-SAPCVM 148
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 64.7 bits (156), Expect = 5.420e-9 Identity = 45/134 (33.58%), Postives = 59/134 (44.03%), Query Frame = 0
Query: 3 VCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCIIESASTCSNGVIGVEARGAXXXXXXXXXXXXXXXXXXX---------EAGLTADDCCVGRIMDSDVFCDDSGTAPCIIEEPCGP 127
VCC AECGTCGGSGCGSR GLTA +CC I +NV C +APC+++ ++ + G+ GLT DCC I + C +G APCI++ P
Sbjct: 96 VCCSAECGTCGGSGCGSRA---GLTANECCTSTIAAANVPCG---SAPCVVDGDTSPTXXXXXXXXSGSFTCDGVLKGDYCCSAGCVECGGSGCSDRGGGLTGADCCTSDISN---LCSVTGAAPCIVDGDTSP 220
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: A0A7S1IY02_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IY02_9EUGL) HSP 1 Score: 62.4 bits (150), Expect = 3.640e-8 Identity = 28/51 (54.90%), Postives = 36/51 (70.59%), Query Frame = 0
Query: 3 VCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCII 53
+CC A CGTCGG+GCGSR AA+CCVG ITD+ ++CD + PCI+
Sbjct: 54 ICCAASCGTCGGTGCGSRSGG----AANCCVGAITDAKLYCDETGGPPCIM 100
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: D7FY01_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY01_ECTSI) HSP 1 Score: 60.5 bits (145), Expect = 1.460e-7 Identity = 32/71 (45.07%), Postives = 37/71 (52.11%), Query Frame = 0
Query: 1 SGVCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCIIESASTCSNGVIGVEARGA 71
SG CC CGTCGG GC G A CC I + C AAPCI+++ TCSNG+ G E GA
Sbjct: 391 SGACCSVGCGTCGGEGCSQLGEG----AESCCTSNIIAAREPCSEKGAAPCIMDTDQTCSNGLAGFENSGA 457
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: A0A6H5J9S1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9S1_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 9.970e-7 Identity = 27/55 (49.09%), Postives = 34/55 (61.82%), Query Frame = 0
Query: 3 VCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCIIESAS 57
VCC AECG CGG GCGS GL +CC+ + D+ C V AAPC+I+S +
Sbjct: 13 VCCTAECGQCGGEGCGS---VPGLDNTNCCINGVLDNQELCSVVGAAPCVIDSGN 64
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Match: D8LSQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSQ5_ECTSI) HSP 1 Score: 57.0 bits (136), Expect = 2.570e-6 Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0
Query: 3 VCCVAECGTCGGSGCGSRGRADGLTAADCCVGRITDSNVFCDVSKAAPCIIES 55
VCC AECG CGG GCGS GL +CC+ + ++ C V+ AAPC+I+S
Sbjct: 60 VCCTAECGQCGGEGCGS---VPGLDNTNCCINGVLNNQELCSVAGAAPCVIDS 109 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8238.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_A-nodosum_M_contig8238.5.1 ID=prot_A-nodosum_M_contig8238.5.1|Name=mRNA_A-nodosum_M_contig8238.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=173bpback to top |