prot_A-nodosum_M_contig823.24.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig823.24.1
Unique Nameprot_A-nodosum_M_contig823.24.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length70
Homology
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BLAST of mRNA_A-nodosum_M_contig823.24.1 vs. uniprot
Match: D7FW43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW43_ECTSI)

HSP 1 Score: 123 bits (309), Expect = 1.570e-35
Identity = 54/69 (78.26%), Postives = 61/69 (88.41%), Query Frame = 0 
Query:    1 VPSELQLSSKWDVCLERAVINFGIGIVTAGLAGVVLTRAPGMRKAVMGFGGGCGVGYSWVLCSQDFKKQ 69
            VPSE ++S KWDVCLER VINFG G+V AGLAGVVLTR+PGMR+AVMGFG GCGVG SWV+CSQDF K+
Sbjct:    9 VPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 77
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BLAST of mRNA_A-nodosum_M_contig823.24.1 vs. uniprot
Match: A0A835YM07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM07_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 4.640e-25
Identity = 41/68 (60.29%), Postives = 54/68 (79.41%), Query Frame = 0 
Query:    1 VPSELQLSSKWDVCLERAVINFGIGIVTAGLAGVVLTRAPGMRKAVMGFGGGCGVGYSWVLCSQDFKK 68
            VPSE+ +S +WD CLER +INFG G++  GL+ VVLTR+PG ++A+MGFG G GVG SWV CSQ F++
Sbjct:   14 VPSEMLISEQWDECLERTLINFGTGLLVGGLSAVVLTRSPGAKRALMGFGAGAGVGASWVHCSQAFER 81
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig823.24.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FW43_ECTSI1.570e-3578.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YM07_9STRA4.640e-2560.29Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007512MICOS complex subunit Mic10PFAMPF04418DUF543coord: 2..67
e-value: 7.8E-17
score: 61.0
IPR007512MICOS complex subunit Mic10PANTHERPTHR21304UNCHARACTERIZEDcoord: 3..68
NoneNo IPR availablePANTHERPTHR21304:SF0MICOS COMPLEX SUBUNIT MIC10coord: 3..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig823contigA-nodosum_M_contig823:152123..161402 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig823.24.1mRNA_A-nodosum_M_contig823.24.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig823 152123..161402 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig823.24.1 ID=prot_A-nodosum_M_contig823.24.1|Name=mRNA_A-nodosum_M_contig823.24.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=70bp
VPSELQLSSKWDVCLERAVINFGIGIVTAGLAGVVLTRAPGMRKAVMGFG
GGCGVGYSWVLCSQDFKKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007512Mic10