prot_A-nodosum_M_contig8220.5.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8220.5.1
Unique Nameprot_A-nodosum_M_contig8220.5.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length432
Homology
BLAST of mRNA_A-nodosum_M_contig8220.5.1 vs. uniprot
Match: A0A6H5K450_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K450_9PHAE)

HSP 1 Score: 194 bits (494), Expect = 9.010e-51
Identity = 223/525 (42.48%), Postives = 265/525 (50.48%), Query Frame = 0
Query:    1 MDMERAALQQQLVEVQKENDMLRLRAVG----PRTNSFSSPSGS-------------RDSSPLPTPRSFGRPKARGISTGFTRDRDTDGGGAAWSPERGYGHGWRGRRDHGRPASGRVRRLEDVLGTRVRLVQLVGLDELAGRANGPGSTRPCGQPPRLSR----------------------------------AEELRVAESSAEAPPSLDTYRRGGRDAFPWSKESALWYGLVTLIVAP--SPGAIKELSKTPP--AHAILLTDAALYVIEVP-TPEAGEGRDEGGRGRAGGDNLCRIERRRVERLSLPLEMRALPSGDEVAVRSSSVVVRLRLLSDD-RG---GRYDGGG------RIAAAAGVERGYLWLSCENNEARGDLVEHLSQWYHKWDENEARGD-------IPNDSSGDFSPSDADAA--------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALEVEQILIKELVEELGQERSLNVTALLLVDKDTLAP 426
            MDMERA LQ+QL+ V+ EN +LR RA+G    PRT SFS  + +             R+ SPLP PRSF RPKARGIS      RD+ G G         G G R RR   R        L +VLG RVR VQL   D   G   G                                                 ++  RVA        +L         A PWSKE  LWYG V+L++AP  S  A  ++ K P   AH ILLTD A+YV+E      A EG     R   G   LC ++R R+  LSLPLE RALP+GDEVAVRS+ VV+RL L  ++ RG   GR   GG      R A AA +ERGYLWLSC+ NEARG+LVE + +W H+W  + ARG        +     G    S ADAA                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +LEV+QIL+ ELV +LG+ERSLNVTALLL D + L P
Sbjct:  574 MDMERADLQEQLMAVKMENKILRSRAMGVPHTPRTRSFSGATSTTKDKELEQDGDLMRELSPLPVPRSFERPKARGISMA----RDSVGSGDEGPANGSGGEGSRHRRGGARGF------LRNVLGPRVRFVQL---DGAGGTLFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSKSARVARMGTRGGGALPL-------ALPWSKELVLWYGRVSLVLAPCASAAAQTDVPKAPATAAHWILLTDGAMYVVETRGIGAAAEGERPAARETNG---LCCLKRHRLWSLSLPLETRALPNGDEVAVRSTVVVLRLNLAEEEGRGPGRGREGVGGVGGTAARSAGAAAIERGYLWLSCDTNEARGELVERIVEW-HQWRPSPARGKDRGAPDGVDGGVGGGPLHSAADAARQASATAAGRLAAAPQSRRGDASVSNGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEVDQILLSELVGDLGEERSLNVTALLLADTEALEP 1074          
BLAST of mRNA_A-nodosum_M_contig8220.5.1 vs. uniprot
Match: D8LKM4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM4_ECTSI)

HSP 1 Score: 164 bits (415), Expect = 1.220e-42
Identity = 198/483 (40.99%), Postives = 237/483 (49.07%), Query Frame = 0
Query:    1 MDMERAALQQQLVEVQKENDMLRLRAVG----PRTNSFSSPSGS-------------RDSSPLPTPRSFGRPKARGISTGFTRDRDTDGGGAAWSPERGYGHGWRGRRDHGRPASGRVRRLEDVLGTRVRLVQLVGLDELAGRANGPGSTRPCGQPPRLSRAEELRVAESSAEAPPSLDTYRRGGRDAFPWSKESALWYGLVTLIVAPSPGAIKELSKTPPAHAILLTDAALYVIEVP-TPEAGEGRDEGGRGRAGGDNLCRIERRRVERLSLPLEMRALPSGDEVAVRSSSVVVRLRLLSDD-RG---GRYDGGGRIAAAAG--VERGYLWLSCENNEARGDLVEHLSQWYHKWDENEARGD-------IPNDSSGDFSPSDADAA--------------------------SXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDALEVEQILIKELVEELGQERSLNVTALLLVDKDTLAP 426
            MDMERA LQ+QL+ V+ EN++LR RA G    PRT SFS  + +             R+ SPLP PRSF RPKARGIS      RD+ G G         G   R RR  G         L +VLG RVR VQL   D   G   G G                  V ++ A A                                               AH ILLTD A+YV+E      A EG     R   G   LC ++R R+  LSLPLE RALP+GDE+AVRS++VV+RL L  ++ RG   GR   GG  A +AG  +ERGYLWLSC+ NEARG+LVE + +W H+W  +  RG        +     G    S ADAA                                XXXXXXXXXXXXXXXXXXXXXXXXXX +LEV+QIL+ ELV +LG+ERSLNVTALLL DK+ L P
Sbjct:    1 MDMERADLQEQLMAVKMENNILRSRATGVPRTPRTRSFSGATLTTKDKELEQDGDLMRELSPLPVPRSFERPKARGISMA----RDSVGSGDEGPANGSGGEVSRHRRGGGGGF------LRNVLGPRVRFVQL---DGAGGTLFGAG------------------VPKAPATA-----------------------------------------------AHWILLTDGAMYVVETRGLGAAAEGERPAARETNG---LCCLKRHRLWSLSLPLETRALPNGDEMAVRSTAVVLRLNLAEEEGRGPGRGREGVGGTAARSAGAAIERGYLWLSCDTNEARGELVERIVEW-HQWRPSPPRGKNRGAPDGVDGGVGGGPLSSTADAARQASATAAAELAAAPQSRRGHASVSNGGDAGKXXXXXXXXXXXXXXXXXXXXXXXXXXXSLEVDQILLSELVGDLGEERSLNVTALLLADKEALDP 401          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8220.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K450_9PHAE9.010e-5142.48Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LKM4_ECTSI1.220e-4240.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..94
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8220contigA-nodosum_M_contig8220:20977..25067 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8220.5.1mRNA_A-nodosum_M_contig8220.5.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8220 20953..25565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8220.5.1 ID=prot_A-nodosum_M_contig8220.5.1|Name=mRNA_A-nodosum_M_contig8220.5.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=432bp
MDMERAALQQQLVEVQKENDMLRLRAVGPRTNSFSSPSGSRDSSPLPTPR
SFGRPKARGISTGFTRDRDTDGGGAAWSPERGYGHGWRGRRDHGRPASGR
VRRLEDVLGTRVRLVQLVGLDELAGRANGPGSTRPCGQPPRLSRAEELRV
AESSAEAPPSLDTYRRGGRDAFPWSKESALWYGLVTLIVAPSPGAIKELS
KTPPAHAILLTDAALYVIEVPTPEAGEGRDEGGRGRAGGDNLCRIERRRV
ERLSLPLEMRALPSGDEVAVRSSSVVVRLRLLSDDRGGRYDGGGRIAAAA
GVERGYLWLSCENNEARGDLVEHLSQWYHKWDENEARGDIPNDSSGDFSP
SDADAASAASAAAAAAAVAASGGSFSSSEAANGSDEDDDALEVEQILIKE
LVEELGQERSLNVTALLLVDKDTLAPLGERR*
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