prot_A-nodosum_M_contig821.36.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig821.36.1
Unique Nameprot_A-nodosum_M_contig821.36.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length230
Homology
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: D7FUB1_ECTSI (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB1_ECTSI)

HSP 1 Score: 335 bits (858), Expect = 4.830e-114
Identity = 158/209 (75.60%), Postives = 185/209 (88.52%), Query Frame = 0
Query:   21 KPPDKPVPTPEEEAEKQAAQMKALETVLEAKNNTVSPPVYHQPLEPFPENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHGDPEKQ 229
            KPPDK  PTPEEE  K+ AQM+AL+ VLEA+NNTVSPP+Y    EPFPENPEE LALDPLPP+VAGRKV I+QKS+PATT+G  GGL+ W+LTFK +ERWSNPLMGWTST DPMSNM+++FSTPEQAV+FC+KRGWK+EVKAPAKREAV+GKF+Y+HNFLPH VEHDLKVNG KT+ F FPTAG+S+YERPLNF GT  VRQHG+PE++
Sbjct:   33 KPPDKXKPTPEEEEAKKVAQMRALDVVLEAQNNTVSPPMYSTRDEPFPENPEEALALDPLPPTVAGRKVIIAQKSKPATTTGTAGGLYGWNLTFKQKERWSNPLMGWTSTGDPMSNMQLSFSTPEQAVKFCQKRGWKYEVKAPAKREAVFGKFAYSHNFLPHNVEHDLKVNGTKTQQFTFPTAGASHYERPLNFVGTAPVRQHGNPEQK 241          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A7S4A6A8_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A6A8_9STRA)

HSP 1 Score: 166 bits (419), Expect = 5.290e-47
Identity = 93/191 (48.69%), Postives = 116/191 (60.73%), Query Frame = 0
Query:   38 AAQMKALETVLEAKNNTVSPP---VYHQPLEPF-PENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHG 224
            AA +  LE +   +N +V+ P   V    L P  P +PEE  AL  +P     R V ISQK++ ATTS        W L +K +ERW+NPLMGWTSTADP+SN ++ F T EQA RF  K GW +EV AP +R   YG  +Y+HNFL   VE DLKVNG +T+ FA P   +S+Y RPL FHG G   QHG
Sbjct:   32 AADLANLERIKAERNRSVTAPHIAVVPDGLAPAGPAHPEEAAALMRIPEIHKKRTVVISQKAQAATTS-ASHASKAWRLGWKTEERWTNPLMGWTSTADPLSNTELKFETAEQAARFATKMGWAFEVAAPIERNKQYGTNTYSHNFLQKWVETDLKVNGTETKHFARPRPNASHYFRPLKFHGDGECVQHG 221          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: W7TF31_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TF31_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.510e-38
Identity = 71/162 (43.83%), Postives = 98/162 (60.49%), Query Frame = 0
Query:   67 FPENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHGDPEK 228
             P+  EE+  L+  P +   RKVTI QK++ A  S      + W++++ +QERWSNPLMGWTSTADP+SN ++ F T E+A RF K++GW   ++    RE V G   YA NFL   VE+ LK  G KT+ F  P   +S + +PL +HG G   QHG P +
Sbjct:   84 LPQKEEEMAVLNEQPANQRARKVTIRQKAQTAMQSAANKS-YPWYISWGSQERWSNPLMGWTSTADPLSNQQLAFDTAEEAARFAKRQGWAVSIEPAISREQVLGTKKYAFNFLAEDVENKLKREGTKTKQFTNPGYTASNWFQPLKYHGDGECEQHGPPRE 244          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A7S2UYX7_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYX7_9STRA)

HSP 1 Score: 133 bits (335), Expect = 6.590e-35
Identity = 65/158 (41.14%), Postives = 91/158 (57.59%), Query Frame = 0
Query:   67 FPENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHG 224
             P NP E+  L  +P   + R V I QK++ A TSG+ G    W +T+K  ERW+NPLMGWTST DPMSN+ + F + ++A  F  K GW +E+    +   V G  +Y+HNFLP   E  L+  G K ++F      SS++ R L +HG G +  HG
Sbjct:   82 LPANPAELATLTGMPQKQSNRTVVIRQKTKSAMTSGLQG-TKAWTITWKMGERWTNPLMGWTSTNDPMSNLTLRFDSADEAKNFAIKNGWDFELHETPEVRTVAGNKAYSHNFLPKAFEETLREEGTKNKIFTRDAPNSSHFYRYLKYHGDGEIPFHG 238          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A7S1FML6_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FML6_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.460e-34
Identity = 70/161 (43.48%), Postives = 92/161 (57.14%), Query Frame = 0
Query:   67 FPENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNM--KMTFSTPEQAVRFCKKRGWKWEV-KAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHG 224
             PEN  E   LD        R VTI Q ++ A TS        W++ + ++E W NPLMG+ S ADPM+ +  +M F TPEQAV FCKKRGW +EV  A    +  +G   Y HNF     + D++  G+K E++    AG+S+Y RPLNFHGT  V QHG
Sbjct:   89 LPENIAEFAVLDKAHDDQKHRTVTIKQYAKSAMTSNESN-ARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 248          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A835YZQ1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZQ1_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.310e-34
Identity = 88/234 (37.61%), Postives = 131/234 (55.98%), Query Frame = 0
Query:    1 RQGVTFAVAARRTMPRALSSKPPDKPVPTPEEEAEKQAAQM--KALETVLEAKNNTVSPPVYHQPLEPFPENPEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKN-QERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKR--EAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHGD-PEK 228
            R G+  A  +R    R LSS  P  P P P+ E  ++ A+   KA    +  ++    P +  +     P+N EEV  L   P +   R VTISQ ++ + TS     +  WH+ + + +E  +N LMGW +T+DP++++ M F   E+A+ FC+K GW + ++   +   + +YGK SY++NFLP  V  DLK+N  KT+ F  P A +S+Y RPLNFHGT  V QHG  PEK
Sbjct:    6 RCGLRGAQRSRAGAVRVLSSNAPATPPPKPDPEVVEKMAEKARKARRLKVVPEHVAALPDLPGR----TPQNKEEVAVLAMQPENHRKRVVTISQNAKSSMTS-FRHNVVKWHIRWDDHKELETNALMGWAATSDPLASLDMLFEDKEKAIAFCEKMGWGYTLEESNEYTYDNLYGKKSYSYNFLPEAVLADLKLNKTKTKQFVRPGANASHYFRPLNFHGTAPVEQHGPKPEK 234          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A7S1FL80_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FL80_9STRA)

HSP 1 Score: 128 bits (321), Expect = 1.040e-33
Identity = 64/141 (45.39%), Postives = 86/141 (60.99%), Query Frame = 0
Query:   87 RKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNM--KMTFSTPEQAVRFCKKRGWKWEV-KAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAFPTAGSSYYERPLNFHGTGTVRQHG 224
            R VTI Q ++ A TS        W++ + ++E W NPLMG+ S ADPM+ +  +M F TPEQAV FCKKRGW +EV  A    +  +G   Y HNF     + D++  G+K E++    AG+S+Y RPLNFHGT  V QHG
Sbjct:    9 RTVTIKQYAKSAMTSNESN-ARAWYIDWDHEENWENPLMGYVSGADPMNQVLKQMRFDTPEQAVAFCKKRGWTYEVGPADTDVQTEFGITQYEHNFFSKAAQVDVRTRGRKCELYHRSAAGASHYFRPLNFHGTDKVEQHG 148          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: G4ZDJ8_PHYSP (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Phytophthora TaxID=4783 RepID=G4ZDJ8_PHYSP)

HSP 1 Score: 127 bits (320), Expect = 1.310e-33
Identity = 68/160 (42.50%), Postives = 86/160 (53.75%), Query Frame = 0
Query:   71 PEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEV-FAFPTAGSSYYERPLNFHGTGTVRQHGDPEKQ 229
            PEE   +        GRK  + + +R    SG+    H W + F     W+NPLMGWTSTADP   +   F T E A RF KK+GW+ E+  PA     YGK SY+HNFLP  VE  +K  GKK+ V F  PT   S + + L +HG G V QHG   K+
Sbjct:    4 PEEAAVVSGTGEWSVGRKAQLFKPARNQMQSGIHNTKH-WEIRFNTPRTWANPLMGWTSTADPYIGLVTKFDTQEAAERFAKKQGWELELAEPAPVGDYYGKISYSHNFLPENVETLIKQKGKKSAVQFKHPTGRRSNWVKTLKYHGNGVVAQHGGEAKE 162          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: D0NMN0_PHYIT (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=12 Tax=Phytophthora TaxID=4783 RepID=D0NMN0_PHYIT)

HSP 1 Score: 129 bits (325), Expect = 2.090e-33
Identity = 68/160 (42.50%), Postives = 87/160 (54.37%), Query Frame = 0
Query:   71 PEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEV-FAFPTAGSSYYERPLNFHGTGTVRQHGDPEKQ 229
            PEE   +        GRK  + + +R    SG+    H W + F +   W NPLMGWTSTADP   +   F T E+A RF KK+GW+ E+  PA     YGK SY+HNFLP  VE  +K  GKK+ V F  PT   S + + L +HG G V QHG   K+
Sbjct:   84 PEEAAIMSGTGEWSVGRKANLFKPARNQMQSGIHQTKH-WEIRFSSPRTWENPLMGWTSTADPYIGLVTKFDTKEEAERFAKKQGWELEITEPAPVGDYYGKISYSHNFLPEHVETLIKQKGKKSAVQFKHPTGRQSNWVKTLKYHGNGVVAQHGGEAKE 242          
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Match: A0A3M6VPP1_9STRA (NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VPP1_9STRA)

HSP 1 Score: 129 bits (324), Expect = 3.090e-33
Identity = 67/160 (41.88%), Postives = 89/160 (55.62%), Query Frame = 0
Query:   71 PEEVLALDPLPPSVAGRKVTISQKSRPATTSGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRFCKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEV-FAFPTAGSSYYERPLNFHGTGTVRQHGDPEKQ 229
            PEE   +        GRK T+ + +R    SG+    H W + F++   W NPLMGWTSTADP   +   F T E+A RF KK+GW+ EV  PA      GK SY+HNFLP  +E  +K+ GKK+ V F  PT   S + + L +HG G V QHG   ++
Sbjct:   86 PEEAAIVSGTGEWSVGRKATLLKPARNQMQSGIHQTKH-WEIRFESPRTWENPLMGWTSTADPYVGLVTKFDTQEEAERFAKKQGWELEVSEPAPAGDYNGKISYSHNFLPEKIETLIKMKGKKSAVQFKHPTGRRSNWVKTLKYHGNGVVSQHGGEARE 244          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig821.36.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUB1_ECTSI4.830e-11475.60NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S4A6A8_9STRA5.290e-4748.69NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
W7TF31_9STRA1.510e-3843.83NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S2UYX7_9STRA6.590e-3541.14NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FML6_9STRA2.460e-3443.48NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A835YZQ1_9STRA4.310e-3437.61NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A7S1FL80_9STRA1.040e-3345.39NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
G4ZDJ8_PHYSP1.310e-3342.50NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
D0NMN0_PHYIT2.090e-3342.50NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]
A0A3M6VPP1_9STRA3.090e-3341.88NADH dehydrogenase [ubiquinone] iron-sulfur protei... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 31..54
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..38
NoneNo IPR availablePANTHERPTHR12219:SF8NADH DEHYDROGENASE [UBIQUINONE] IRON-SULFUR PROTEIN 4, MITOCHONDRIALcoord: 12..180
IPR038532NADH dehydrogenase ubiquinone Fe-S protein 4-like superfamilyGENE3D3.30.160.190atu1810 like domaincoord: 85..165
e-value: 6.2E-27
score: 95.2
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPFAMPF04800ETC_C1_NDUFA4coord: 88..180
e-value: 3.0E-27
score: 94.7
IPR006885NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrialPANTHERPTHR12219NADH-UBIQUINONE OXIDOREDUCTASEcoord: 12..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig821contigA-nodosum_M_contig821:263399..272452 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig821.36.1mRNA_A-nodosum_M_contig821.36.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig821 263399..272452 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig821.36.1 ID=prot_A-nodosum_M_contig821.36.1|Name=mRNA_A-nodosum_M_contig821.36.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=230bp
RQGVTFAVAARRTMPRALSSKPPDKPVPTPEEEAEKQAAQMKALETVLEA
KNNTVSPPVYHQPLEPFPENPEEVLALDPLPPSVAGRKVTISQKSRPATT
SGVGGGLHVWHLTFKNQERWSNPLMGWTSTADPMSNMKMTFSTPEQAVRF
CKKRGWKWEVKAPAKREAVYGKFSYAHNFLPHMVEHDLKVNGKKTEVFAF
PTAGSSYYERPLNFHGTGTVRQHGDPEKQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038532NDUFS4-like_sf
IPR006885NADH_UbQ_FeS_4_mit