prot_A-nodosum_M_contig820.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig820.9.1
Unique Nameprot_A-nodosum_M_contig820.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length613
Homology
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A6H5KPC0_9PHAE (Zinc finger CCCH-type with G patch domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC0_9PHAE)

HSP 1 Score: 368 bits (944), Expect = 8.320e-116
Identity = 291/683 (42.61%), Postives = 349/683 (51.10%), Query Frame = 0
Query:   12 ALRNQLMTLEAQREQLASLIGDDPKGPMQQLQEELNAAIAGIRRRLDAQAATTAKTVSSLPQEVVTPTSH-----------------DNASQFAEGDTCLAPRVFDRRRALALVEEMDEARGTCLVTWVHPRHKRELACRYWKEGRNCKFSGRDCSFSHGIEVPLLELLLPDENYNSSNRGSGQTTSAVNEAGALSREPCAVPEAGVGASAGSGRMSAAERWLATLDAGSRVLARYHDRVWYDATAEHPAVDG-----------FLAVRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEE--------SELEDAWAND------DGDDDEF-----FFRERVLGDRREDGSARVGVGKGAE--AGS----------CLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDHLRVD---GGLRPRXXXXXXXXXXXXGYSSSAGNGGDDDGEPQKA----MFDLLNVAIHASAR-----------------------------DKGARTAAVGSSSFALARSSL-AGRNRPVFDGSSPASRVRGGKTDETVGALAGGKGGEGSSSLGKSAGNMTRSELRSHLVGAREAETALAAKAARLEETVARNSERDPQIAAAAKRKLEEIRVQAREVRASMDQAERVLGHR 598
            AL  QL  L AQREQL +L+GDD   P+  LQEEL  AI GI  RL        +                                + +     G  CLAPRVFDRRRA A+VEE++ ++GTCLVTWVHPR   E+ CR+WKEGR+CKFSG DC FSHG+EVPLL L LPD+       G G ++                                   WLA+L +GSRVLA YHDRVWY+ATAE PA               LAVRF GFE +G VS+PA+ SHLAP +    A    G G G   A DD E        S+LEDAWA D       G+ D       FF+ERVLGDRR    A           AGS           L +DAY+FGDWEQHTKGFGSRM++RMGYRRGEGLGKEKQGISRPVPIRVLPERR LDHLRVD   GG   R      XXXXXX                       MF+ LN  +HAS R                             D     A+  S+S   A ++  AG   P+        R  G  +D       GG  G G + +G +A  M+++ELRSHLVGAREAE  LAAK  RL+ET++RN E DP+ AA A++KL+++  QA+EVR S  +AER L +R
Sbjct:    6 ALERQLADLRAQREQLVALVGDDSHSPLIPLQEELAVAIDGIIERLSLLREQAGENXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPSFPIVVGALCLAPRVFDRRRARAVVEEVESSKGTCLVTWVHPRKHGEIVCRFWKEGRSCKFSGPDCPFSHGVEVPLLGL-LPDD-------GGGGSS-----------------------------------WLASLRSGSRVLAFYHDRVWYEATAEGPARPAGAGAGAAASSMLLAVRFKGFEADGPVSVPADSSHLAPLEAAVTAPEIHGVGGGNGGASDDAEHEXXXXXESDLEDAWAADAVAAGRGGERDGSMTAGAFFQERVLGDRRSPAGAXXXXXXXXXXAAGSGDXXXXXXXXXLGSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKSARSVGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMRKXXXXXXXXXXXXXXXXXXXXRLLFDAGGDSYPSCASSSSTSIPTATTATGAGTAHPL--------RKSGVLSDTN---RDGGGAGVGRAGVGGAAARMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENR 634          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: D8LBV1_ECTSI (G-patch domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBV1_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 7.590e-44
Identity = 135/305 (44.26%), Postives = 163/305 (53.44%), Query Frame = 0
Query:  345 LLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDHLRVD---GGLRPRXXXXXXXXXXXXGYSSSAGNGGDDDGEPQKA----MFDLLNVAIHASARDKGARTAAVGSSSFALARSSLAGRNRPVFDGSSPASRVRGGKTDETVGALAGGKGGEGSSSLGKSA-----------------------GNMTRSELRSHLVGAREAETALAAKAARLEETVARNSERDPQIAAAAKRKLEEIRVQAREVRASMDQAERVLGHR-------KEKCKSGKGGLFSF 612
            L++DAY+FGDWEQHTKGFGSRM++RMGYRRGEGLGKEKQGISRPVPIRVLPERR LDHLRVD   GG   R       XXXXX                       MF+ LN  +HAS   + A     G      A      R RP+FD    AS      T  ++       G   + +L KS                          M+++ELRSHLVGAREAE  LAAK  RL+ET++RN E DP+ AA A++KL+++  QA+EVR S  +AER L +R              K GLFSF
Sbjct:   20 LVSDAYMFGDWEQHTKGFGSRMMNRMGYRRGEGLGKEKQGISRPVPIRVLPERRTLDHLRVDDVGGGKTARSVGGDGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXMFNFLNKTMHASMSKRKAE----GXXXXXXASPLPGQRIRPLFDAGG-ASYSSSAATSTSIPTATTAAGAGTAHALRKSGVFPDKKRDGGXXXXXXXXXXXXXXRMSQAELRSHLVGAREAEATLAAKIGRLKETISRNEELDPRTAAQARQKLKQVCQQAKEVRDSRGRAERALENRGGGGGKXXXXXXXXKAGLFSF 319          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A4P9VUV8_9FUNG (G-patch domain-containing protein (Fragment) n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9VUV8_9FUNG)

HSP 1 Score: 84.7 bits (208), Expect = 5.450e-14
Identity = 72/245 (29.39%), Postives = 106/245 (43.27%), Query Frame = 0
Query:  217 LATLDAGSRVLARYHDRVWYDATAEHPAVDGFLAVRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDHLRVDGGLRPRXXXXXXXXXXXXGYSSSAGNGGDDDGEPQKA----MFDLLNVAIHASAR 457
            +A L   +R LA + D +WY  +       G  +V F GFE E +   P  +  L   + ++    RGGG         DE++  E      + ++              E+GS   G+G  A       +D   FGDWE HTKG GSR++ +MGYR G GLG+  +GI RPV +R+L   + L H     G++ +                  G  G D G    A    +FD LN +++A  R
Sbjct:   41 VARLRVDARALAAF-DGLWYPCSVVDVDGRGGFSVVFDGFEGERTWVGPEEIVPLVGLEDEEDVEERGGGR--------DEDTSTEXXXXXXESEE--------------ENGSVSCGIG--ALGTPSAGSDGTPFGDWEAHTKGIGSRLMLKMGYRMGSGLGRHAEGIVRPVEVRILSSGKGLGH----SGMKRKRTSTPHSGSGASTPGRKRGKTGSDAGSISSASASTVFDFLNGSLNARHR 256          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A3L6ETS4_MAIZE (Zinc finger CCCH domain-containing protein 18 n=1 Tax=Zea mays TaxID=4577 RepID=A0A3L6ETS4_MAIZE)

HSP 1 Score: 82.8 bits (203), Expect = 1.500e-13
Identity = 71/208 (34.13%), Postives = 103/208 (49.52%), Query Frame = 0
Query:  215 RWLATLDAGSRVLAR--YHDRVWYDATAEHPAVDGFLAVRFTGFEDEGS-VSLPAN------LSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAG-SCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDHL----RVDGG 408
            RW  +L  GS +LA   Y+  +W  A  E  + D  L +    F+D+GS  SLP++       +H++  D D+G+ S             DEESE      +DD D              +EDGS   G+G       S + TD  +F  WE HT+G  S+M+++MGYR G GLG   QG+  P+P++VLP +++LDH       DGG
Sbjct:   13 RWEQSL-VGSSILATSGYNSGLWRRAELE--SWDDNLKIGQVVFQDDGSSASLPSDSLSVSEYAHMS--DEDEGSLS-------------DEESEF-----SDDAD--------------QEDGSVHQGLGLLEFTNFSGIQTDTMIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDHALASSEADGG 183          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A7K4LI14_9AVES (Zinc finger CCCH-type with G patch domain-containing protein (Fragment) n=10 Tax=Tinamidae TaxID=8803 RepID=A0A7K4LI14_9AVES)

HSP 1 Score: 81.3 bits (199), Expect = 1.850e-12
Identity = 75/250 (30.00%), Postives = 106/250 (42.40%), Query Frame = 0
Query:  217 LATLDAGSRVLARYHDRVWYDATAEHPAVD-GFLAVRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDHLRVDGGLRPRXXXXXXXXXXXXGYSSSAGNGGDDDGEPQKAMFDLLNVAIHA-SARDKGARTA 464
            L+TL+ GS  LA++ D +WY  TA+   +D G+  V+F     + +V     +  + P   +DGA S          A  DE+S  +  +A D G                             E G      +  FG WE HT+G GS++L RMGY  G+GLGK  +G   PV   VLP  ++LD        R +            G  SSAG  G    +P + +FD LN  +   SA +K   TA
Sbjct:  232 LSTLEVGSACLAKHSDGIWY--TAKITDIDSGYYTVKFDSLLLKEAVVEGDGI--IPPLRSEDGASS----------AESDEDSVDDSGYAKDSGT---------------------------PENGEWTPACSSSFGGWEAHTRGIGSKLLVRMGYEFGKGLGKNSEGRVEPVQAVVLPRGKSLDQCAEVLQRRQQGRLDAGKPRKCPGKGSSAGQAGARGRKPPRNVFDFLNEKLRGKSAGEKAGGTA 440          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: UPI000B906A38 (zinc finger CCCH-type with G patch domain-containing protein n=1 Tax=Folsomia candida TaxID=158441 RepID=UPI000B906A38)

HSP 1 Score: 80.9 bits (198), Expect = 2.340e-12
Identity = 78/283 (27.56%), Postives = 105/283 (37.10%), Query Frame = 0
Query:  120 VTWVHPRHKRELACRYWKEGRNCKFSGRDCSFSHGIEVPLLELL-LPDENYNSSNRGSGQTTSAVNEAGALSREPCAVPEAGVGASAGSGRMSAAERWLATLDAGSRVLARYHDRVWYDATAEHPAVDGFLAVRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALD 401
            V ++HP  K +L C Y K+   CKFS  +C +SHG  V   +L    + +Y                          VP A                         RVLA+YHD +WY+AT      DG   V+F    D+   S    +    P              +  S     +E E ED         D     E V               +  E     +T A V GDWE+HT GFGSR++ +MGY  G GLGKE +G   PV   ++P   +LD
Sbjct:  173 VIFLHPVVKSQLMCPYLKDNC-CKFSEFECRYSHGEIVQFSKLRDYSEPDYTK-----------------------VVPSA-------------------------RVLAKYHDGLWYNATVLRLTKDGNCEVQF----DKDDTSSKIGVDETVP--------------LNTSEIESSDEEEYED---------DVCTLYEDV-------------ATQNLECDLLKITSADVLGDWEKHTTGFGSRLMMKMGYVMGSGLGKESEGRVLPVDAIMVPLGMSLD 366          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: I1IDD7_BRADI (Uncharacterized protein n=3 Tax=Brachypodium distachyon TaxID=15368 RepID=I1IDD7_BRADI)

HSP 1 Score: 80.5 bits (197), Expect = 2.980e-12
Identity = 67/192 (34.90%), Postives = 96/192 (50.00%), Query Frame = 0
Query:  215 RWLATLDAGSRVLAR--YHDRVWYDATAEHPAVDGFLAVRFTGFEDEGSVS-LPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSC-LLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDH 402
            RW  +L AGS +LA   +H  +W  A  E    D  L      F+D+GS + LP +   L+ P+Y D +     GG           SE E  ++ D              GD+ ED S   GVG      S  + ++  +F  WEQHT+G  S+M++RMGYR G GLG   QG+  P+P++VLP +++LDH
Sbjct:  188 RWEQSL-AGSNILAASGHHSGLWRRAELESWDDDSKLGQ--VVFQDDGSTARLPGDS--LSIPEYADVSDEDDEGGS----------SEGESDFSED--------------GDK-EDESIHRGVGLVESTNSSGVQSETVIFAKWEQHTRGVASKMMARMGYREGMGLGVSGQGMVDPIPVKVLPPKQSLDH 349          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A226EHC8_FOLCA (Zinc finger CCCH-type with G patch domain-containing protein n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EHC8_FOLCA)

HSP 1 Score: 80.9 bits (198), Expect = 3.900e-12
Identity = 78/283 (27.56%), Postives = 105/283 (37.10%), Query Frame = 0
Query:  120 VTWVHPRHKRELACRYWKEGRNCKFSGRDCSFSHGIEVPLLELL-LPDENYNSSNRGSGQTTSAVNEAGALSREPCAVPEAGVGASAGSGRMSAAERWLATLDAGSRVLARYHDRVWYDATAEHPAVDGFLAVRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALD 401
            V ++HP  K +L C Y K+   CKFS  +C +SHG  V   +L    + +Y                          VP A                         RVLA+YHD +WY+AT      DG   V+F    D+   S    +    P              +  S     +E E ED         D     E V               +  E     +T A V GDWE+HT GFGSR++ +MGY  G GLGKE +G   PV   ++P   +LD
Sbjct:  173 VIFLHPVVKSQLMCPYLKDNC-CKFSEFECRYSHGEIVQFSKLRDYSEPDYTK-----------------------VVPSA-------------------------RVLAKYHDGLWYNATVLRLTKDGNCEVQF----DKDDTSSKIGVDETVP--------------LNTSEIESSDEEEYED---------DVCTLYEDV-------------ATQNLECDLLKITSADVLGDWEKHTTGFGSRLMMKMGYVMGSGLGKESEGRVLPVDAIMVPLGMSLD 366          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A5J9UY15_9POAL (Uncharacterized protein n=1 Tax=Eragrostis curvula TaxID=38414 RepID=A0A5J9UY15_9POAL)

HSP 1 Score: 79.0 bits (193), Expect = 9.130e-12
Identity = 61/191 (31.94%), Postives = 94/191 (49.21%), Query Frame = 0
Query:  215 RWLATLDAGSRVLARYHDR-VWYDATAEHPAVDGFLAVRFTGFEDEG-SVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAG-SCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDH 402
            +W  +L   +   A  HD  +W  A  E  + D  L +    F+D+G S  LP++   ++  +Y D            S   D+  S  E++  +DDGD              +ED SA  G+G       S + TD  +F  WE HT+G  S+M+++MGYR G GLG   QG+  P+P++VLP +++LDH
Sbjct:  187 KWQQSLVGSTIFAASGHDSGLWRRAELE--SWDDDLKLGQVVFQDDGTSARLPSDSLSIS--EYAD-----------MSDEDDEGTSSEEESEFSDDGD--------------KEDDSAHRGLGLSESTNFSGIQTDTVIFAKWEHHTRGVASKMMAKMGYREGMGLGLSGQGMLDPIPVKVLPPKQSLDH 348          
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Match: A0A3L6RNK1_PANMI (Zinc finger CCCH domain-containing protein 18 n=1 Tax=Panicum miliaceum TaxID=4540 RepID=A0A3L6RNK1_PANMI)

HSP 1 Score: 78.2 bits (191), Expect = 1.450e-11
Identity = 65/195 (33.33%), Postives = 96/195 (49.23%), Query Frame = 0
Query:  215 RWLATLDAGSRVLAR--YHDRVWYDATAEHPAVDGFLAVRFTGFEDEGSVS-LPAN---LSHLAPPDYDDGAGSRGGGGVGASPARDDEESELEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAG-SCLLTDAYVFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRALDH 402
            RW  +L  GS +LA   +H  +W  A  E  + D  L +    F+D+GS + LP++   +S  A    +D  GS             +EESE      +DD D              +EDG    G+G       S + TD  +F  WE HT+G  S+M+++MGYR G GLG   QG+  P+P++VLP +++LDH
Sbjct:  187 RWQQSL-VGSSILAASGHHSGLWRRAELE--SWDDNLKLGQVIFQDDGSSARLPSDSLSVSEYADMSDEDDEGSSS-----------EEESEF-----SDDAD--------------QEDGCVHQGLGLLEPTNFSGIQTDTVIFAKWEHHTRGVASKMMAKMGYREGMGLGVSGQGMLDPIPVKVLPPKQSLDH 348          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KPC0_9PHAE8.320e-11642.61Zinc finger CCCH-type with G patch domain-containi... [more]
D8LBV1_ECTSI7.590e-4444.26G-patch domain-containing protein n=1 Tax=Ectocarp... [more]
A0A4P9VUV8_9FUNG5.450e-1429.39G-patch domain-containing protein (Fragment) n=1 T... [more]
A0A3L6ETS4_MAIZE1.500e-1334.13Zinc finger CCCH domain-containing protein 18 n=1 ... [more]
A0A7K4LI14_9AVES1.850e-1230.00Zinc finger CCCH-type with G patch domain-containi... [more]
UPI000B906A382.340e-1227.56zinc finger CCCH-type with G patch domain-containi... [more]
I1IDD7_BRADI2.980e-1234.90Uncharacterized protein n=3 Tax=Brachypodium dista... [more]
A0A226EHC8_FOLCA3.900e-1227.56Zinc finger CCCH-type with G patch domain-containi... [more]
A0A5J9UY15_9POAL9.130e-1231.94Uncharacterized protein n=1 Tax=Eragrostis curvula... [more]
A0A3L6RNK1_PANMI1.450e-1133.33Zinc finger CCCH domain-containing protein 18 n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 10..30
NoneNo IPR availableCOILSCoilCoilcoord: 567..594
NoneNo IPR availableGENE3D2.30.30.1190coord: 95..164
e-value: 5.3E-8
score: 34.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 484..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 267..305
IPR000467G-patch domainSMARTSM00443G-patch_5coord: 357..403
e-value: 1.1E-10
score: 51.5
IPR000467G-patch domainPFAMPF01585G-patchcoord: 359..401
e-value: 3.9E-12
score: 45.8
IPR000467G-patch domainPROSITEPS50174G_PATCHcoord: 359..405
score: 13.450608
IPR043560Zinc finger CCCH-type with G patch domain-containing proteinPANTHERPTHR46297ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEINcoord: 217..602
coord: 5..162
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 128..156
score: 11.075008

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig820contigA-nodosum_M_contig820:90195..100842 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig820.9.1mRNA_A-nodosum_M_contig820.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig820 90021..101144 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig820.9.1 ID=prot_A-nodosum_M_contig820.9.1|Name=mRNA_A-nodosum_M_contig820.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=613bp
MADQIEQAGDDALRNQLMTLEAQREQLASLIGDDPKGPMQQLQEELNAAI
AGIRRRLDAQAATTAKTVSSLPQEVVTPTSHDNASQFAEGDTCLAPRVFD
RRRALALVEEMDEARGTCLVTWVHPRHKRELACRYWKEGRNCKFSGRDCS
FSHGIEVPLLELLLPDENYNSSNRGSGQTTSAVNEAGALSREPCAVPEAG
VGASAGSGRMSAAERWLATLDAGSRVLARYHDRVWYDATAEHPAVDGFLA
VRFTGFEDEGSVSLPANLSHLAPPDYDDGAGSRGGGGVGASPARDDEESE
LEDAWANDDGDDDEFFFRERVLGDRREDGSARVGVGKGAEAGSCLLTDAY
VFGDWEQHTKGFGSRMLSRMGYRRGEGLGKEKQGISRPVPIRVLPERRAL
DHLRVDGGLRPRPQPGPRKHKSKAGYSSSAGNGGDDDGEPQKAMFDLLNV
AIHASARDKGARTAAVGSSSFALARSSLAGRNRPVFDGSSPASRVRGGKT
DETVGALAGGKGGEGSSSLGKSAGNMTRSELRSHLVGAREAETALAAKAA
RLEETVARNSERDPQIAAAAKRKLEEIRVQAREVRASMDQAERVLGHRKE
KCKSGKGGLFSF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000467G_patch_dom
IPR043560ZGPAT
IPR000571Znf_CCCH