prot_A-nodosum_M_contig820.15.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig820.15.2
Unique Nameprot_A-nodosum_M_contig820.15.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length800
Homology
BLAST of mRNA_A-nodosum_M_contig820.15.2 vs. uniprot
Match: D8LBU8_ECTSI (Similar to centromere protein E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBU8_ECTSI)

HSP 1 Score: 404 bits (1038), Expect = 5.140e-126
Identity = 273/523 (52.20%), Postives = 352/523 (67.30%), Query Frame = 0
Query:    1 MSESVVFELKLQIQHLEEKLTFLAGGTNGAELVEVLMEKDEELEKNSQRLKQMEAKMMQLVEGAKRLDAKRRELARHSEHQAIRMEGLEKELDRQLGISDDLRTQVSDTKQDLASFKDQLCKTQADMAAAEESALENLNAARAEASSLQSIVEEQRATISELQATKKGLENTVAVKDEEIKSMEQRKKDIVQRSREMKNSLESLLWDSQKSQSELKGQRSSLESELHRLRRRMDERAKISLEEERKATALARECGALKTELESSRQDIASTNEELDAVRASKSEADEALLAKDKENVKLRSKHESLKKDMDRRLHLANQEKMTLSDSMANNKRLFDEREATLCDQMKHMEKDSSALADALTEKVSQLEEQLLKAEEDGERLREEARALKEETSGKARRFEAAKKTEARWRARAESSISSQEAKLEELKAELVVARQQGADLRHVETENKELRGRIERQESFQXXXXXXXXXXXXARSGL-----RASVTSSSEKAAGRGSVHLVPLPPPMNERKSTGDDGEGS 518
            MSES VFELKL++QHL+EKLTFLAGGTNGAELV+V+MEKD ELE+ +++LK++EA   +L E AKR+DA+RRE  R SEHQ +R++ LE+EL+RQLGISD+ R +V+DTK+DLA         Q +MA+ E SALE L  AR EASSLQ +VE QR TI  L++  K                 QRKKD+  RSREMKN LE LL +SQKSQ++L GQRS+LE+EL +LRRRMDERAK +LEEERK T LARECG LKTELE++RQDI S +EEL AVR +K EADEALL KDKEN KLR+K+ESL+ +MDRRLH  NQEK  L++ M  + R   ERE  L  Q++   +++  + +A + ++S++EEQL  A ED ERL+ +AR  K           A  K+EARWRARAE  ++ + A LE   AE+   +QQG +LRH+E ENK+L+ RIERQE+F             A   +     R     +   A+GR +  L+PLPP M   +   DDG G+
Sbjct:    4 MSESEVFELKLEMQHLQEKLTFLAGGTNGAELVDVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLALTXXXXXXXQVEMASKEASALERLATARDEASSLQRMVEGQRDTIVRLESDSKXXXXXXXXXXXXXXXXXQRKKDVAARSREMKNHLEKLLLNSQKSQADLAGQRSTLEAELGKLRRRMDERAKTALEEERKTTTLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLGKDKENSKLRNKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKERENLLHGQLEATGRENKEIQEAQSAEISEMEEQLRLANEDRERLKADARKAK-----------AHSKSEARWRARAEDVMAGRAADLERANAEVAAMKQQGVELRHMEAENKDLKARIERQEAFHKRRMEKEKREKRAGRPVSGGSGRVPPGPAGGAASGRAAAQLLPLPPLMTYGE---DDGRGA 512          
BLAST of mRNA_A-nodosum_M_contig820.15.2 vs. uniprot
Match: A0A6H5KY91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY91_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 5.210e-58
Identity = 122/195 (62.56%), Postives = 157/195 (80.51%), Query Frame = 0
Query:    1 MSESVVFELKLQIQHLEEKLTFLAGGTNGAELVEVLMEKDEELEKNSQRLKQMEAKMMQLVEGAKRLDAKRRELARHSEHQAIRMEGLEKELDRQLGISDDLRTQVSDTKQDLASFKDQLCKTQADMAAAEESALENLNAARAEASSLQSIVEEQRATISELQATKKGLENTVAVKDEEIKSMEQRKKDIVQRSR 195
            MSES VFELKL++QHL+EKLTFLAGGTNGAELV V+MEKD ELE+ +++LK++EA   +L E AKR+DA+RRE  R SEHQ +R++ LE+EL+RQLGISD+ R +V+DTK+DL   K++L KTQ +MA+ E SALE L  A  EASSLQ +VE QR TI  L++ KKGLE TV+ +++EIKS+EQRKKD+  RSR
Sbjct:    4 MSESEVFELKLEMQHLQEKLTFLAGGTNGAELVAVVMEKDAELEQINKKLKEVEASRSKLAESAKRVDARRREAMRQSEHQLVRVQALERELERQLGISDEQRRRVADTKEDLTLTKEELRKTQVEMASKEASALERLATAHDEASSLQRMVEGQRETIVGLESDKKGLEETVSRREDEIKSLEQRKKDVAARSR 198          
BLAST of mRNA_A-nodosum_M_contig820.15.2 vs. uniprot
Match: A0A6H5KXI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXI9_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.400e-52
Identity = 144/314 (45.86%), Postives = 192/314 (61.15%), Query Frame = 0
Query:  197 MKNSLESLLWDSQKSQSELKGQRSSLESELHRLRRRMDERAKISLEEERKATALARECGALKTELESSRQDIASTNEELDAVRASKSEADEALLAKDKENVKLRSKHESLKKDMDRRLHLANQEKMTLSDSMANNKRLFDEREATLCDQMKHMEKDSSALADALTEKVSQLEEQLLKAEEDGERLREEARALKEETSGKARRFEAAKKTEARWRARAESSISSQEAKLEELKAELVVARQQGADLRHVETENKELRGRIERQESFQXXXXXXXXXXXXARSGL-----RASVTSSSEKAAGRGSVHLVPLPPPM 505
            MKN LE LL DSQKSQ++L GQR++LE+EL +LRRRMDERAK++LEEERK T LARECG LKTELE++RQDI S +EEL AVR +K EADEALL KDKEN KLRSK+ESL+ +MDRRLH  NQEK  L++ M  + R   +RE  L  Q++   +++  + +A   ++S++EEQL  A ED ERL+ +AR                       +A+A S +++               + QG +LRH+E ENK+L+ RIERQE+F             A   +     R     +   A+GR +  L+PLPP M
Sbjct:    1 MKNHLEKLLLDSQKSQADLAGQRATLEAELGKLRRRMDERAKMALEEERKTTRLARECGNLKTELEAARQDITSASEELAAVRLTKQEADEALLEKDKENSKLRSKNESLRVEMDRRLHALNQEKGDLAEKMEESIRELKDRENLLHGQLEATGRENKEIQEAQAAEISEMEEQLRLANEDRERLKADAR-----------------------KAKAHSKVAAM--------------KHQGVELRHMEAENKDLKARIERQEAFHKRRMEREKREKRAGRPVSGGCGRVPPGPAGGAASGRAAAQLLPLPPLM 277          
BLAST of mRNA_A-nodosum_M_contig820.15.2 vs. uniprot
Match: A0A835ZIP7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIP7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 4.600e-12
Identity = 71/240 (29.58%), Postives = 117/240 (48.75%), Query Frame = 0
Query:    1 MSESVVFELKLQIQHLEEKLTFLAGGTNGAELVEVLMEKDEELEKNSQRLKQMEAKMMQLVEGAKRLDAKRRELARHSEHQAIRMEGLEKELDRQLGISDDLRTQVSDTKQDLASFKDQLCKTQADMAAAEESALE---------------------------------NLNAARAEASSLQSIVEEQRATISELQATKKGLENTVAVKDEEIKSMEQRKKDIVQRSREMKNSLESLLWD 207
            + +  VF+LK++ +++ EKL FL G TNGAEL  ++MEK+ E+   ++RL + + ++ QLVE  K+ D KR +L +  E Q  R  G E  L+ Q G++D LR   +  + + A     + + Q D    + S+                                    L AA AEAS ++++VE QR  + E    +  L   V  K  E++++E R+ D+  R+R +K  LE  L +
Sbjct:   35 VKDETVFQLKMENRNMREKLNFLTGTTNGAELTGIIMEKESEIRTLNERLVEQDQQITQLVESLKKGDTKREKLRKAFEAQEQRALGFETALNSQFGVTDSLRATCATLEAEGAEKDATIAQLQGDQLRLQCSSARVAAHAGAATCRHRPHRASAWSRTCDISQQRTDAELAAAHAEASDMRAVVETQRRKLEEGGQREAQLRELVDAKKGEVEALETRRSDLAARARGIKQELEKSLGE 274          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig820.15.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LBU8_ECTSI5.140e-12652.20Similar to centromere protein E n=1 Tax=Ectocarpus... [more]
A0A6H5KY91_9PHAE5.210e-5862.56Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXI9_9PHAE1.400e-5245.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZIP7_9STRA4.600e-1229.58Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 254..281
NoneNo IPR availableCOILSCoilCoilcoord: 33..70
NoneNo IPR availableCOILSCoilCoilcoord: 138..200
NoneNo IPR availableCOILSCoilCoilcoord: 410..444
NoneNo IPR availableCOILSCoilCoilcoord: 350..391
NoneNo IPR availableCOILSCoilCoilcoord: 212..232
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 515..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 580..598
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 710..732
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 633..657
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 440..478
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..799
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 602..632

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig820contigA-nodosum_M_contig820:176735..187519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig820.15.2mRNA_A-nodosum_M_contig820.15.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig820 176687..188486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig820.15.2 ID=prot_A-nodosum_M_contig820.15.2|Name=mRNA_A-nodosum_M_contig820.15.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=800bp
MSESVVFELKLQIQHLEEKLTFLAGGTNGAELVEVLMEKDEELEKNSQRL
KQMEAKMMQLVEGAKRLDAKRRELARHSEHQAIRMEGLEKELDRQLGISD
DLRTQVSDTKQDLASFKDQLCKTQADMAAAEESALENLNAARAEASSLQS
IVEEQRATISELQATKKGLENTVAVKDEEIKSMEQRKKDIVQRSREMKNS
LESLLWDSQKSQSELKGQRSSLESELHRLRRRMDERAKISLEEERKATAL
ARECGALKTELESSRQDIASTNEELDAVRASKSEADEALLAKDKENVKLR
SKHESLKKDMDRRLHLANQEKMTLSDSMANNKRLFDEREATLCDQMKHME
KDSSALADALTEKVSQLEEQLLKAEEDGERLREEARALKEETSGKARRFE
AAKKTEARWRARAESSISSQEAKLEELKAELVVARQQGADLRHVETENKE
LRGRIERQESFQRRRMEKEKKERRARSGLRASVTSSSEKAAGRGSVHLVP
LPPPMNERKSTGDDGEGSNPGNDSSINHDGNDNDSNTSTDASVRDTPQST
HTSSSAEDKHAGSGTRSAKAATAISRRDGSDNEGGARSGGREHRGMRSVS
PFARPSSASSSSRASAKFFSTPEYSSRNAENEYSSRKAGKENSSRNAEKE
NRGRSRRGPAWGARSYSRKSSAHRNGGNAGDCIGVSDAAGGRGGGDGKTD
DAADTREKNASAGKCNSQTAVSKSSDVLRDRTPTSATGDGLGCRPLENRK
NRSVTRSPALESSEDARNTSRGRRPLATKSAAPRSSSLGKQTRVVTGWR*
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