prot_A-nodosum_M_contig82.34.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig82.34.1
Unique Nameprot_A-nodosum_M_contig82.34.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length646
Homology
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A6H5J8I7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8I7_9PHAE)

HSP 1 Score: 181 bits (460), Expect = 1.080e-46
Identity = 90/129 (69.77%), Postives = 103/129 (79.84%), Query Frame = 0
Query:  189 QLEKDREAATDEVATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDVDTMLNNAHEVHGGRKMPPPGWDSLGRFPDAAVREHFLQQMRAHMVGGGAMLSPPDSPHVATNVH--DDSGSSL 315
            QLEKDR+ ATDE+ATD++ELRL LLRRRGELV HFASC LES+MRKGIFLADPRDVD+ML  AH VHG R+MPP GW+ LGRF + AVREHFL+QMR +M+GG    SPPDSPH     H  DD+  SL
Sbjct:    7 QLEKDRDTATDELATDDMELRLSLLRRRGELVAHFASCWLESDMRKGIFLADPRDVDSMLEAAHRVHG-RQMPPCGWECLGRFSEMAVREHFLEQMRTYMIGGNTSASPPDSPHPMGQQHGLDDATGSL 134          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A6H5J9E8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E8_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 2.100e-10
Identity = 40/105 (38.10%), Postives = 63/105 (60.00%), Query Frame = 0
Query:  153 AKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEVATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDV-DTMLNNAHEVHG 256
            A+ LGVS+ +L + CR++GI RWPYR VRS++ +I+ L+   E    E+    L+ RL+ L ++  LV  FASCGL   +R  +F + P  + D ++ +  E  G
Sbjct:   28 ARALGVSLNKLKRACRQYGIPRWPYRQVRSIRSTIQSLKNALEKCDSEIERASLKDRLESLIKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLVKDIVEQSG 132          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: D8LRL6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRL6_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 3.970e-10
Identity = 38/105 (36.19%), Postives = 62/105 (59.05%), Query Frame = 0
Query:  153 AKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEVATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDV-DTMLNNAHEVHG 256
            A+ LG+S+ +L + CR++GI RWPYR VRS++ +I  L+   E    ++    L+ RL+ L ++  LV  FASCGL   +R  +F + P  + D ++ +  E  G
Sbjct:   61 ARALGISLNKLKRACRQYGIPRWPYRQVRSIRSTIHSLKNALEKCDSDIERASLKDRLESLIKKESLVCKFASCGLTGPLRNMLFSSKPESICDVLIKDIVEQSG 165          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A6H5K0H9_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0H9_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 1.500e-8
Identity = 39/112 (34.82%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  134 KGITLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEVATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDVD 245
            K +TL  L+  +  P+ DV+K +GVS   + + CR++GI RWPYR +RSV +SI+ +E     A   V    L+ +L  L  + +L+   A+ G  +++RK I    P ++D
Sbjct:  106 KRVTLRDLERYFEYPIEDVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQG-VDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELD 216          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: D8LC40_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC40_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 3.590e-8
Identity = 33/40 (82.50%), Postives = 37/40 (92.50%), Query Frame = 0
Query:  112 KRTRVEGRGSSAAQRAAANEACKGITLEALQAQYYRPLSD 151
            KRTRVEGRGSSAAQRAAA+EACK I+L+ LQ QY+RPLSD
Sbjct:   18 KRTRVEGRGSSAAQRAAASEACKSISLKRLQEQYHRPLSD 57          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: D8LJT6_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJT6_ECTSI)

HSP 1 Score: 67.8 bits (164), Expect = 3.980e-8
Identity = 38/112 (33.93%), Postives = 64/112 (57.14%), Query Frame = 0
Query:  134 KGITLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEVATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDVD 245
            K +TL  L+  +  P+ +V+K +GVS   + + CR++GI RWPYR +RSV +SI+ +E     A   V    L+ +L  L  + +L+   A+ G  +++RK I    P ++D
Sbjct:  104 KRVTLRDLERYFEYPIEEVSKMMGVSTTIIKRLCRKYGIKRWPYRQIRSVNKSIKYVELLARTAQG-VDRQRLQEQLVSLHYKKQLICQAATTGASAKVRKSILQMRPEELD 214          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: M2Y7B9_GALSU (Transcription factor n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y7B9_GALSU)

HSP 1 Score: 65.9 bits (159), Expect = 1.120e-7
Identity = 51/185 (27.57%), Postives = 86/185 (46.49%), Query Frame = 0
Query:  134 KGITLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKD--REAATDEVATDELELR----LKLLRRRGELVVHFASCGLESEMRKGIFLADPRDVDTMLNNAHEVHGGRKMPPPGWDSLGRFPDAAVREHFLQQMRAHMVGGGAMLSPPDSPHVATNVHDDSG 312
            K +TL+ L+  + R L + AK+LGV    +   CR++GI RWPYR ++S+   IE LE+    ++  ++   DE + R    L+ L+R+ + V  F       EM  G    +  + D ML          K+  P  +SLG F DA  +   +++ +   +G    +  P+   +       SG
Sbjct:    6 KSLTLDCLKNYFGRTLEEAAKELGVCSTVIKNVCRQYGIRRWPYRKIQSINRLIEYLEQQLREDSKGEKFLGDEKKRRVINELRRLQRQKDRVQAFPESASGQEM--GDEELEDSEPDKMLTET-------KLEYPSSESLGSF-DAQEKSKTIEETQQLFLGSFQTVDVPEEEIIRRTAEQSSG 180          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A7S0VA07_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VA07_9CRYP)

HSP 1 Score: 60.1 bits (144), Expect = 7.320e-7
Identity = 31/84 (36.90%), Postives = 55/84 (65.48%), Query Frame = 0
Query:  118 GRGSSAAQRAAANEACKGITLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEV 201
            GR + AAQRA  N   K + LE L   ++ P   VAK+LG+ +  L K CR +GI RWP+R ++S++ ++++++ +++A + +V
Sbjct:    9 GRTTPAAQRAMVN---KDVKLEELSKYFHLPEKAVAKELGICLTSLKKLCRSYGITRWPFRKLKSLERTMKKVQNEQDAVSTQV 89          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A6T6CZ68_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A6T6CZ68_9RHOD)

HSP 1 Score: 60.8 bits (146), Expect = 5.450e-6
Identity = 26/68 (38.24%), Postives = 48/68 (70.59%), Query Frame = 0
Query:  134 KGITLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDEV 201
            + I  E L   +  P+++ AK LGV V  L K+CR++G++RWP+R +RS+ + +++LE++  A+TD++
Sbjct:   48 RNIRFEDLSEHFRLPINEAAKRLGVCVTVLKKQCRKYGVVRWPFRKLRSIDKLVQKLERNALASTDKL 115          
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Match: A0A7S0UCX4_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCX4_HEMAN)

HSP 1 Score: 56.6 bits (135), Expect = 5.710e-6
Identity = 26/63 (41.27%), Postives = 42/63 (66.67%), Query Frame = 0
Query:  132 ACKGI-TLEALQAQYYRPLSDVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKD 193
            AC+ I +LEAL   +  P   VAK+LG+ +  L K CR FG+ RWP+R ++S+Q ++ +++ D
Sbjct:   50 ACQKIDSLEALSKYFTMPEKQVAKELGICLTSLKKMCRSFGVTRWPFRKLKSIQRTMAKVQDD 112          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig82.34.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5J8I7_9PHAE1.080e-4669.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5J9E8_9PHAE2.100e-1038.10RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LRL6_ECTSI3.970e-1036.19Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5K0H9_9PHAE1.500e-834.82RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LC40_ECTSI3.590e-882.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LJT6_ECTSI3.980e-833.93Putative NIN-like transcription factor n=1 Tax=Ect... [more]
M2Y7B9_GALSU1.120e-727.57Transcription factor n=1 Tax=Galdieria sulphuraria... [more]
A0A7S0VA07_9CRYP7.320e-736.90Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6T6CZ68_9RHOD5.450e-638.24Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A0A7S0UCX4_HEMAN5.710e-641.27Hypothetical protein (Fragment) n=2 Tax=Hemiselmis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 180..207
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..500
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 468..626
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..123
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 290..401
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..119
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..56
NoneNo IPR availablePANTHERPTHR46373:SF2PROTEIN RKD4coord: 9..199
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 136..183
e-value: 2.1E-14
score: 53.2
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 119..203
score: 16.506004
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 9..199

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig82contigA-nodosum_M_contig82:306840..332506 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig82.34.1mRNA_A-nodosum_M_contig82.34.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig82 306589..333068 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig82.34.1 ID=prot_A-nodosum_M_contig82.34.1|Name=mRNA_A-nodosum_M_contig82.34.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=646bp
MSNRGRAGAHQHQGCPSSSGGNAAESRKTLPTDANTTPTTTPQRLGGASI
QQQVGGDKSAMWGAPCEGGGSDTTATSAAEDAARGGGGAAPTRGASWRGA
DKVESESRVGKKRTRVEGRGSSAAQRAAANEACKGITLEALQAQYYRPLS
DVAKDLGVSVARLLKKCREFGILRWPYRHVRSVQESIEQLEKDREAATDE
VATDELELRLKLLRRRGELVVHFASCGLESEMRKGIFLADPRDVDTMLNN
AHEVHGGRKMPPPGWDSLGRFPDAAVREHFLQQMRAHMVGGGAMLSPPDS
PHVATNVHDDSGSSLEDSSRDVLHHHHQQQKLQYQYQHLQLGYRGVAPHH
SRPEGQWQQQPPPPQSHAYPRQGSHHYQQPAWQGRQMYPRGGAPDPVAHS
APYWPGLQGAAEMPEVMGVGAGAGMGGGGVGKSLEASELGRLRSSPGHVD
VPSSVSVPHAGVYAPASAASWQAGPQTGSATGPLGHQEEGGRNSSLSPLL
RPRFSGPPGSGGVAGYRVGGGGRDPQMPMNTWGGGNLGPASESSAAAPGG
GINHGGALRDEWRPSERLTPQTPPTPSHLGGPRRPWGSGDLVNPAGRGGL
PQSGGAGALPSIFNRNGRGRRGQTWRGPGPCRLQWVRDRWVRRVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like