prot_A-nodosum_M_contig8198.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8198.2.1
Unique Nameprot_A-nodosum_M_contig8198.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length111
Homology
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 1.100e-52
Identity = 74/120 (61.67%), Postives = 91/120 (75.83%), Query Frame = 0
Query:    1 MCGACIKGKGD---------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQGDEPYDGDQEV 111
            MCGACI+G+G           G FKAYV DRCPEC  GDLDFA  G GRW+I+W FVPC  G D TF+FEGSN  YWKIQPRG +SPVE+LW+NG++A R++DNFF+++G  P+DG+QEV
Sbjct:   86 MCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGG-PFDGEQEV 204          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 2.270e-32
Identity = 52/108 (48.15%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 MCGACIKGKGDRG--------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQ 100
            MCGAC++G+G  G         FK ++MD+CPEC+ GDLDF  G  GRW+I W+FV C  G++ +F  E    +YWKIQPRG+ +PVE L + G  A RT DN F ++
Sbjct:  358 MCGACVEGEGTGGGSGSDPVGTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELE 465          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 123 bits (308), Expect = 3.340e-32
Identity = 51/111 (45.95%), Postives = 71/111 (63.96%), Query Frame = 0
Query:    1 MCGACIKGKGDRG---------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQGD 102
            MCGAC++G               FKA++ D+CPEC  GDLDF+M G GRW+I W+FV C  G++ +F+   +N +YWK+QPRG+ +PV  L V+G+ A RT DN F +  D
Sbjct:  151 MCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVAC-PGEETSFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHND 260          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: A0A1X6NJE1_PORUM (Uncharacterized protein (Fragment) n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJE1_PORUM)

HSP 1 Score: 120 bits (302), Expect = 4.840e-32
Identity = 56/108 (51.85%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    2 CGACIK--GKGD-------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPC-NDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVI 99
            CGAC++  G GD        G F AYVMDRCPECA GDLD A  G GRW ++W  VPC   G  P F+ EGSN HY K+Q RG  +P   + V G    RTQDNFF++
Sbjct:   91 CGACLRVTGSGDGAGANPITGTFSAYVMDRCPECAAGDLDLATPGDGRWAVSWTVVPCPTAGGAPEFLLEGSNPHYLKVQVRGLPAPAASVSVGGAACARTQDNFFIV 198          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 3.970e-29
Identity = 51/108 (47.22%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    1 MCGACIKGKGDRG--------EFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQ 100
            MCG+C++G+G  G         FK ++MD+CPEC  GDLDF  G  GRW+I WRFV C  G++ +F       +YWKIQPRG+ +PVE L + G  A RT DN F ++
Sbjct:  395 MCGSCVEGEGTGGGGGDNPIGTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVAC-PGEEVSFKVVEMTPYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELE 501          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: A0A1S3HSP2_LINUN (uncharacterized protein LOC106157840 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3HSP2_LINUN)

HSP 1 Score: 79.0 bits (193), Expect = 1.550e-15
Identity = 40/113 (35.40%), Postives = 59/113 (52.21%), Query Frame = 0
Query:    2 CGACIKGKGD---------RGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWV-NGEKAT-----RTQDNFFVI 99
            CG C++  G           G +  YV D CP C  GD+DFA+ G GRWNI++  VPC   D+ ++ F+ S+  Y KIQ   ++ PV  + + NG         RT D F+++
Sbjct:   84 CGICLRVTGSGQGLGLNPLTGTYLVYVTDLCPSCKQGDVDFALVGDGRWNIDFTAVPCPFNDNVSYRFQDSSPWYIKIQVGNTRLPVTGMALYNGASKEYVPMMRTNDGFWIM 196          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: A0A2D4C6K8_PYTIN (Carbohydratebinding protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6K8_PYTIN)

HSP 1 Score: 72.4 bits (176), Expect = 6.920e-14
Identity = 41/114 (35.96%), Postives = 57/114 (50.00%), Query Frame = 0
Query:    2 CGACIKGK-GDRGEFKAYVMDRCPECAHGDLDFAMG--------GTGRWNINWRFVPCND----GDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVN-GEKATRTQDNFFVIQG 101
            CG C+  K GD       ++D+CPEC HGDLDFA          G GR  I+W FV C D    GD    + EGSN ++   QP+  K  ++ + ++ G    R + N  V+ G
Sbjct:   18 CGRCVSVKHGDNAPVTIQIVDQCPECKHGDLDFAPDAYNAVIKKGPGREKISWSFVECPDLFATGDFEFVLKEGSNPYWTAFQPQNFKHGIDCVDIDVGNGWERLERNEGVVVG 131          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: UPI001EF60F45 (hypothetical protein n=4 Tax=Frankia TaxID=1854 RepID=UPI001EF60F45)

HSP 1 Score: 73.6 bits (179), Expect = 4.070e-13
Identity = 43/111 (38.74%), Postives = 58/111 (52.25%), Query Frame = 0
Query:    1 MCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGG--------TGRWNINWRFV-PCNDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLW--VNG--EKATRTQDNFFV 98
            MCG  I+  G RG     ++DRCPEC  GD+DF+            GR  I+WR + P N G     I EGS+ ++  IQPR  ++PV  L   VNG  +   R Q N+F+
Sbjct:  185 MCGGYIQATGPRGTVVVKIVDRCPECKPGDIDFSPEAFATIADPVAGRVPISWRLISPANIGSIQYRIKEGSSPYWLAIQPRNHRNPVVSLEISVNGSWQALPREQYNYFL 295          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: UPI001C58296F (T9SS type A sorting domain-containing protein n=1 Tax=Aquimarina litoralis TaxID=584605 RepID=UPI001C58296F)

HSP 1 Score: 71.2 bits (173), Expect = 2.310e-12
Identity = 43/114 (37.72%), Postives = 58/114 (50.88%), Query Frame = 0
Query:    2 CGACIKGKGDRGEFKAYVMDRCPECAHGDLD-----FAMGGT---GRWNINWRFVPCNDGDDPTFIF----EGSNAHYWKIQPRGSKSPVEKLWVNGEKAT-----RTQDNFFV 98
            CGACI+  G +G  +  V+DRCPECA GD+D     FAM      GR  I+W+FVPC+   +   I     EGS+ ++  IQ R  K  + K+       T     R   NFF+
Sbjct:   72 CGACIEVTGPKGSVRLKVVDRCPECAEGDVDMTEQAFAMMADVIDGRVPISWKFVPCDSASNNESIKINFKEGSSIYWTAIQFRNIKHAIAKMEYQLSDNTWKPVDRVLFNFFI 185          
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Match: A0A1V2QUL7_9PSEU (Lipoprotein A-like protein n=2 Tax=Saccharothrix TaxID=2071 RepID=A0A1V2QUL7_9PSEU)

HSP 1 Score: 68.9 bits (167), Expect = 6.780e-12
Identity = 37/113 (32.74%), Postives = 56/113 (49.56%), Query Frame = 0
Query:    1 MCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGG--------TGRWNINWRFVPCNDGDDPTFIFEGSNAHYW-KIQPRGSKSPVEKLWVNGEKA----TRTQDNFFVIQ 100
            MCGA ++  G  GE    ++DRCPECA GD+DF+            GR  I+WR V  +      + ++  ++ +W  IQ R  ++PV KL V          R Q N+F+ +
Sbjct:   70 MCGAYLRATGPLGEVTVKIVDRCPECAPGDVDFSQAAFARIANPTAGRVPISWRLVSPDISGPVRYRYKEGSSQWWCGIQVRNHRNPVAKLEVRAGSGWVSLPRYQYNYFISE 182          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8198.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LHU1_ECTSI1.100e-5261.67Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LGP4_ECTSI2.270e-3248.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LRN1_ECTSI3.340e-3245.95Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
A0A1X6NJE1_PORUM4.840e-3251.85Uncharacterized protein (Fragment) n=1 Tax=Porphyr... [more]
A0A6H5KBW3_9PHAE3.970e-2947.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A1S3HSP2_LINUN1.550e-1535.40uncharacterized protein LOC106157840 n=1 Tax=Lingu... [more]
A0A2D4C6K8_PYTIN6.920e-1435.96Carbohydratebinding protein putative n=1 Tax=Pythi... [more]
UPI001EF60F454.070e-1338.74hypothetical protein n=4 Tax=Frankia TaxID=1854 Re... [more]
UPI001C58296F2.310e-1237.72T9SS type A sorting domain-containing protein n=1 ... [more]
A0A1V2QUL7_9PSEU6.780e-1232.74Lipoprotein A-like protein n=2 Tax=Saccharothrix T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 111..111
NoneNo IPR availablePANTHERPTHR31836FAMILY NOT NAMEDcoord: 2..95
NoneNo IPR availablePANTHERPTHR31836:SF21EXPANSIN-LIKE PROTEIN 2coord: 2..95
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 1..49
e-value: 2.1E-9
score: 39.5
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 1..69
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 57..110
e-value: 1.1E-5
score: 27.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8198contigA-nodosum_M_contig8198:19785..20117 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8198.2.1mRNA_A-nodosum_M_contig8198.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8198 19770..20117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8198.2.1 ID=prot_A-nodosum_M_contig8198.2.1|Name=mRNA_A-nodosum_M_contig8198.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=111bp
MCGACIKGKGDRGEFKAYVMDRCPECAHGDLDFAMGGTGRWNINWRFVPC
NDGDDPTFIFEGSNAHYWKIQPRGSKSPVEKLWVNGEKATRTQDNFFVIQ
GDEPYDGDQEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf