prot_A-nodosum_M_contig819.17.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig819.17.1
Unique Nameprot_A-nodosum_M_contig819.17.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length842
Homology
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A6H5KV61_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KV61_9PHAE)

HSP 1 Score: 298 bits (762), Expect = 6.070e-83
Identity = 205/397 (51.64%), Postives = 242/397 (60.96%), Query Frame = 0
Query:  233 ASIEAATAKLRLDD----GDNDVDGVGHVNRGTIDGGGGEDQRDQRSRGEHWKHGSSGEEREPQP-----KFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGG--PYGPYGFHLGGGGFTGGGME---GRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLV--GPLT--PGMVVDGSHQPQ--------NLPVSNAMPVQAHWGRPNRSLSGGVEMGTFPVEHHTGSGNPWGGVNDTGSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGCGMG 603
            +S+  ATA++ L D    G ++ +G  H+    + GG GE+++D       W  G               KF LKVL+PG+TAGCLIGKGG+IINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGEQPT+V EAVAEMLRRLREA R  P   Q+  MGG  PY     H    G+  GG++   GR++QV +RLLVPLAAGGLIIG+GGETIKAIGARTGARVILAGKDADVAGVPSER+CSIQ DLEGAIKVV +IVGKMAEDRGLS   +NQTCYQTGL    P+    G +  G +Q Q        N P ++    Q  WG       G                     V + G +  G GGV GP P+P      G S   A+    MG
Sbjct:  132 SSLAEATARMHLADPHEKGSDEKEGHEHL----LSGGDGEEKQD-------WSQGDEXXXXXXXXXXXXXKFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTP---QAPFMGGGVPYSTV--HD---GYGSGGLDEPYGRDAQVMIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQADLEGAIKVVFLIVGKMAEDRGLS---NNQTCYQTGLSLGAPVVGGDGSIDGGQYQFQHPTMAVACNNPFAHQHQQQPQWGGSXXXXQGLNRE-----------------VGEVGGAAPGVGGV-GPLPSPQQNRGGGSSGQQAAQSAAMG 488          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: D7FM83_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM83_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 3.490e-78
Identity = 160/253 (63.24%), Postives = 183/253 (72.33%), Query Frame = 0
Query:  222 QTGGEVVEAGEA--SIEAATAKLRLDD---GDNDVDGVGHVNRGTIDGGGGEDQRDQRSRGEHWKHGSSGEE---REPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGG--PYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQ 464
            Q GG     G+   S+  ATA++ L D   G ++ +G  H+    + GG GE+++D       W  G    E   REPQPKF LKVL+PG+TAGCLIGKGG+IINQ+QT T TRVKLSQKNEFFPGTHDRVALVQGEQPT+V EAVAEMLRRLREA R  P   Q+  MGG  PY       G GG  G    GR++QVT+RLLVPLAAGGLIIG+GGETIKAIGARTGARVILAGKDADVAGVPSER+CSIQ
Sbjct:   52 QQGGGSAGGGDVCGSLAEATARMHLADPHEGGDEEEGHDHL----LSGGDGEEKQD-------WSQGDEDREEREREPQPKFALKVLVPGITAGCLIGKGGKIINQIQTNTNTRVKLSQKNEFFPGTHDRVALVQGEQPTLVAEAVAEMLRRLREAARPTP---QAPFMGGGVPYSTVHEGYGSGGLDG--PHGRDAQVTIRLLVPLAAGGLIIGRGGETIKAIGARTGARVILAGKDADVAGVPSERLCSIQ 288          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A835YS36_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YS36_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.680e-32
Identity = 89/220 (40.45%), Postives = 122/220 (55.45%), Query Frame = 0
Query:  292 QPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCY---QTGLVG-PLTP 507
            QP    K+LIP   +GC+IGK           TGT++KLSQ +EFFPGT++RV LV GE P  V +AVAE+LRR  E  R   H + S                          +      R ++P+AA GLIIG+GGET+KA+G +TGARV LA K      + +ER+C++ G ++G ++V   ++ KMA++  LSKY +  T Y   Q  L G PLTP
Sbjct:   46 QPSCAFKMLIPSHVSGCIIGKA---------LTGTKIKLSQNSEFFPGTNERVVLVMGE-PDAVRKAVAEVLRRTSEGLRAIKHQSSSSP----------------------TAKKPGALFRAVLPMAAAGLIIGRGGETVKALGQQTGARVQLANKAQ--CPIATERICTVTGSMQGVLEVASFMIEKMAQEPVLSKYANPSTSYAPDQLDLQGSPLTP 231          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A3Q3IQ13_MONAL (Uncharacterized LOC109967721 n=3 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3IQ13_MONAL)

HSP 1 Score: 143 bits (360), Expect = 2.560e-32
Identity = 153/525 (29.14%), Postives = 229/525 (43.62%), Query Frame = 0
Query:  281 KHGSSGEEREPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVG--EAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNAMPV----QAHWGRPNRSLSGGVEMGTFPVEHHTGSGNPWGGVNDTGSSVDGPGGV-----MGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIAFMTPTGSPQGPVPEIYMDGGEMLAQTQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAML 794
            K  ++GEE E    + LKVLIP   AG +IGKGG+ I QLQ  TG  +KLS+  +F+PGT +RV L+QG    + G    +AE +R + ++  Q P     +       P                 R  Q   +L+VP +  GLIIGKGG T+KA+  ++GA V L+ K   +     ER+ +I G+ E   K V +IV K+ ED   S   S      + + GP+        +  P   P +N   V     A     +R L+G   MG FP    + SGN    +    +++   G       +G  PA   G+   V+  +  GG G G P+                                                        VP Y       A  P    G  ++ G++A           +   +P  +      E   DG + + +  +AVP+N+VG ILGKGG T+++ Q +TGARIQ+S++G++IPGT NR VTI+G+  A  +AQ ++
Sbjct:   84 KRTNTGEEGE----YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHNFIAEKVREMPQSA-QKPEPVSILQPQTTVNP----------------DRVKQA--KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN--LQERVVTISGEPEQNRKAVEIIVQKIQEDPQSS---SCLNISYSNVSGPVA-------NSNPTGSPYANTAEVLPNAAAAAATASRLLTG---MGAFPTAMSSFSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAASAKPGGAGGGKPR--------------------------------------------------------VPSYASDASSSAGHPATGLG-GFSLGSLAAATGAS--NGYLNASSPLMASSLLATEKLADGAKDVVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLI 509          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A8C4QEJ6_EPTBU (NOVA alternative splicing regulator 1 n=2 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4QEJ6_EPTBU)

HSP 1 Score: 139 bits (351), Expect = 3.730e-31
Identity = 139/507 (27.42%), Postives = 214/507 (42.21%), Query Frame = 0
Query:  294 KFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVG--EAVAEMLRRLR-EAGRQHPHST---QSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNAMPVQAHWGRPNRSLSGGVEMGTFPVEHHTGSGNPWGGVNDTGSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIAFMTPTGSPQGPVPEIYMDGGEMLAQTQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAML 794
            ++ +KVLIP   AG +IGKGG+ I QLQ  TG  +KLS+  +F+PGT +RVAL+QG    + G    +AE +R +    G+  P +    Q+ V                        R  Q   +++VP    GLIIGKGG T+KA+  ++GA + L+ K     G   ER+ ++ G+ E A + V +I+ K+ ED        + +C      G   P    + +  P     +   PV+   G      SG   + TFP       GN    ++   S++ G G  + PAP    GL    + P+ +                                         SP         +     +S  P    L G                 Y     + +      G E      T +  G        G ++L   ++AVP+N+VG ILGKGG T+++ Q +TGARIQ+S++G+++PGT NR VTI+G   A  +AQ ++
Sbjct:   80 QYYMKVLIPSYAAGSIIGKGGQTIVQLQKETGAIIKLSKSKDFYPGTTERVALIQGSVEALNGVHSFIAEKIREMPPNGGKTEPVNILQPQTAV---------------------SPDRIKQA--KIIVPNTTAGLIIGKGGATVKAMMEQSGAWIQLSQKPEG--GSLQERVATVSGEAEQACRAVELIIQKIQED------PQSGSCLNISYAGMTGPVANANPTGSPYASAGATVSPVEVLPGAGILGHSGLANVTTFPAVLSGFGGNDLVAISSALSTLAGYGYSL-PAPGLALGLTPAAAAPAPA-------------------------------------IFGSSPTAVASILASYANETPASVSPSSFALGGLTT-----------NGGYLSSATSPLVGSTLLGGEKNDGATTATTGGTA------GKDVL---EIAVPENLVGAILGKGGKTLVEYQEMTGARIQISKKGEFVPGTRNRKVTITGPPAAQQAAQYLI 497          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A7S2UYD0_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYD0_9STRA)

HSP 1 Score: 131 bits (329), Expect = 7.370e-31
Identity = 86/227 (37.89%), Postives = 115/227 (50.66%), Query Frame = 0
Query:  290 EPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVG-------PLTPGM 509
            E Q  F +K+ IPG  AGC+IGKGG +I  LQ  T TR+KLS    FFPG+ +RV L  G+ P  V  A+ E++ R+ E  +     + +                      G    N ++ + +LVP AA G +IGKGGE +KAI A +G +V +A KD      PSER C I G+  G   V+   V ++ EDR LSKYQ+  T Y     G       PL  GM
Sbjct:   22 EYQEDFTIKITIPGYLAGCIIGKGGSVITDLQARTSTRIKLSAARAFFPGSSNRVLLCTGK-PDAVKTALTEIVSRVEENFKTKNADSSAS---------------------GEHPVNKELQMGVLVPQAASGCVIGKGGEVMKAIQASSGCKVQMAQKDQ--MSYPSERPCDITGEAAGIAGVMCTFVDRLLEDRDLSKYQNPSTNYTPRTAGGAAGGGVPLATGM 224          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A3P8V7J7_CYNSE (RNA-binding protein Nova-1-like n=71 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A3P8V7J7_CYNSE)

HSP 1 Score: 135 bits (341), Expect = 4.620e-30
Identity = 150/538 (27.88%), Postives = 229/538 (42.57%), Query Frame = 0
Query:  281 KHGSSGEEREPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVG--EAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTV--------RLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNA---MPVQAHWGRPNRSL----SGGVEMGTFPVEHHTGSGNPWGGVNDT-------GSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIAFMTPTGSPQGPVPEIYMDGGEMLAQTQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAML 794
            K  ++GEE E    + LKVLIP   AG +IGKGG+ I QLQ  TG  +KLS+  +F+PGT +RV L+QG    + G  + +AE +R +       P STQ                        +     Q TV        +L+VP +  GLIIGKGG T+KA+  ++GA V L+ K   +     ER+ +I G+ E   K V +IV K+ ED   S   S      + + GP+        +  P   P +N+   MP  A       S     +G   +G FP    + SGN    +          G + +  G  + PA       A+GV    A+                                                      A   ++    ++  Y       A  P    G  ++ G++A           ++  +P  +      E   +G + + +  +AVP+N+VG ILGKGG T+++ Q +TGARIQ+S++G++IPGT NR VTI+G+Q A  +AQ ++
Sbjct:   47 KRTNTGEEGE----YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGVHDFIAEKVREM-------PQSTQKTEP--------------------VSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN--LQERVVTISGEPEQNRKAVEIIVQKIQEDPQSS---SCLNISYSNITGPVA-------NSNPTGSPYANSTEVMPAAAXXXXXXXSSLLGQAGLAGVGAFPATMSSLSGNDLLAITSALNTLASYGYNTNSLGLGLNPA------AASGVLAAVAAN-----------------------------------------------------ANPAAAXXXNLLASYASDASTSAAHPAAGLG-GFSLGSLAAATGAT--NGYLSAASPLVASSLLATEKLAEGAKEIVE--IAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSQAATQAAQYLI 477          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: Q1LYC7_DANRE (NOVA alternative splicing regulator 1 n=63 Tax=Clupeocephala TaxID=186625 RepID=Q1LYC7_DANRE)

HSP 1 Score: 135 bits (340), Expect = 6.130e-30
Identity = 158/533 (29.64%), Postives = 238/533 (44.65%), Query Frame = 0
Query:  281 KHGSSGEEREPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTV--------RLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNA---MPVQAHWGRPNRSL--SGGVEMGTFPVEHHTGSGNPWGGVNDTGSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALAT-SSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIAFMTPTGSPQGPVPEIYMDGGEMLAQ-----TQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAML 794
            K  ++GEE E    + LKVLIP   AG +IGKGG+ I QLQ  TG  +KLS+  +F+PGT +RV L+QG       EA+  +   + E  R+ P S+Q                        +     Q TV        +L+VP +  GLIIGKGG T+KA+  ++GA V L+ K   +     ER+ ++ G+ E   K V +IV K+ ED   S   S      + + GP+        +  P   P +N+   +P  A     +  L  +G   MG FP    + SGN    +    +++   G            L  G++  +ASG                                        + XXXXXXX     LAT +S   G               P  P    ++ G++A        G+   ++ P+     P+    + G E LA+      ++AVP+N+VG ILGKGG T+++ Q +TGARIQ+S++G++IPGT NR VTI+G+  A  +AQ ++
Sbjct:   47 KRSNTGEEGE----YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-----EALNGVHNFIAEKVREMPQSSQKTEP--------------------VSILQPQTTVNPDRIKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGIN--LQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSS---SCLNISYSNITGPVA-------NSNPTGSPFANSTEVLPNAAAAATASTLLGQAGLAGMGGFPAAMSSLSGNDLLAITSALNTLASYGYNTNT-------LGLGLNPAAASG-----------------------------------VLAAVAXXXXXXXXXXXXLLATYASEASGG-----------GGHPAAPSLGGFSLGSLAAAT-----GASNGYLNPSS----PLVASSLLGTEKLAEGGKEVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLI 476          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A8C4R860_EPTBU (Uncharacterized protein n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4R860_EPTBU)

HSP 1 Score: 135 bits (340), Expect = 6.540e-30
Identity = 149/514 (28.99%), Postives = 219/514 (42.61%), Query Frame = 0
Query:  294 KFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNAMPVQAHWGRPNRSLSGGVEMGTFPVEHHTGSG-NPWGGVNDTGSSVDGPGGV----MGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIA-------FMTPTGSPQGPVPEIYMDGGEMLAQTQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAMLH 795
            ++ LKVLIP   AG +IGKGG+ I QLQ  TGT +KLS+  +F+PGT +RVAL+QG  P  +  A   +  R+RE     P +T     G P  P                  +     +++VP    GLIIGK G T+K++  ++GA + L+ K    AG   ER+ ++ G+     + V +IV K+ ED        + +C      G       + G       PV+NA P     G P  S +G       P       G +  G V    + + G GG     +  A   + G   G+ TPS + G   G     +  P                                       +    S++     L  +     A+    P   A   G+IA +  + P G+ +        F+T T       P       E +   ++ VP+N+VG ILGKGG T+++ Q  TGARIQ+S++G+Y+PGT NR VTI+G    VAS QA  H
Sbjct:   56 QYHLKVLIPSYAAGSIIGKGGQTIVQLQKETGTTIKLSKSKDFYPGTTERVALIQG-LPDALNAAHDFIAERIREV----PTATGKNESGTPMQPQT------------AVTPDRMKQAKIIVPNTTAGLIIGKAGATVKSMMEQSGAWIQLSQKPE--AGSLQERVATVSGEPNQVRRAVQLIVQKIQED------PQSGSCLNISYAG-------ISG-------PVANANPT----GSPYASAAGICPSDVLPAVTAGLLGPSAIGSVPTFPTMLSGLGGTDLVAISSALNTLVGYGYGLPTPSLALGLTPGSGPTAVAAP---------------------------------------SALLGSNIAAANLLANYASEAGALTSVAP-AVAATPGSIAALAGLGPNGAYLGSPLMANTFLT-TDKRMASAPITAESAKETM---EITVPENLVGAILGKGGKTLVEYQEATGARIQISKKGEYVPGTRNRKVTITGP---VASQQAAQH 479          
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Match: A0A2D0Q9M1_ICTPU (RNA-binding protein Nova-1-like isoform X1 n=11 Tax=Siluroidei TaxID=1489793 RepID=A0A2D0Q9M1_ICTPU)

HSP 1 Score: 135 bits (340), Expect = 7.060e-30
Identity = 151/531 (28.44%), Postives = 233/531 (43.88%), Query Frame = 0
Query:  281 KHGSSGEEREPQPKFGLKVLIPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGEQPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTGGGMEGRNSQVTV--------RLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDADVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTGLVGPLTPGMVVDGSHQPQNLPVSNAMPV----QAHWGRPNRSLSGGVEMGTFPVEHHTGSGNPWGGVNDTGSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGCGMGGPQQRLQQPQQXXXXXXXXXXXXXXXXXXXXXXXXSPXXXXXXXQQHVALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYGSEIAFMTPTGSPQGPVPEIYMDGGEMLAQ-----TQVAVPDNMVGVILGKGGATVIDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAML 794
            K  ++GEE E    + LKVLIP   AG +IGKGG+ I QLQ  TG  +KLS+  +F+PGT +RV L+QG       EA+  +   + E  R+ P S+Q                        +     Q TV        +L+VP +  GLIIGKGG T+K++  ++GA V L+ K   +     ER+ ++ G+ E   K V +IV K+ ED   S   S      + + GP+        +  P   P +N+  V     A       +L G   + +FP      SGN    +    +++   G            L  G++  +ASG                                        +    XXXX  ++  + +S   G            A  P  P    ++ G++A        G+   ++ P  SP   +    + G E LA+      ++AVP+N+VG ILGKGG T+++ Q +TGARIQ+S++G++IPGT NR VTI+G+  A  +AQ ++
Sbjct:   58 KRTNTGEEGE----YFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTV-----EALNGVHNFIAEKVREMPQSSQKSEP--------------------VSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGATVKSVMEQSGAWVQLSQKPEGIN--LQERVVTVSGEPEQNRKAVEIIVQKIQEDPQSS---SCLNISYSNVTGPVA-------NSNPTGSPYANSAEVLPSAAAXXXXXXXTLLGQAGLASFPSAMSGFSGNDLLAITSALNTLASYGYNTNT-------LGLGLNPAAASG----------------------------------VLAAVAASANPXXXXXXNLLASYASEASGG-----------AAHPAAPGLAGFSLGSLAAAT-----GASNGYLNPATSP---LVASSLLGTEKLAEGGKEVLEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFIPGTRNRKVTITGSPAATQAAQYLI 487          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig819.17.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV61_9PHAE6.070e-8351.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FM83_ECTSI3.490e-7863.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YS36_9STRA1.680e-3240.45Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A3Q3IQ13_MONAL2.560e-3229.14Uncharacterized LOC109967721 n=3 Tax=Monopterus al... [more]
A0A8C4QEJ6_EPTBU3.730e-3127.42NOVA alternative splicing regulator 1 n=2 Tax=Epta... [more]
A0A7S2UYD0_9STRA7.370e-3137.89Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa... [more]
A0A3P8V7J7_CYNSE4.620e-3027.88RNA-binding protein Nova-1-like n=71 Tax=Osteoglos... [more]
Q1LYC7_DANRE6.130e-3029.64NOVA alternative splicing regulator 1 n=63 Tax=Clu... [more]
A0A8C4R860_EPTBU6.540e-3028.99Uncharacterized protein n=1 Tax=Eptatretus burgeri... [more]
A0A2D0Q9M1_ICTPU7.060e-3028.44RNA-binding protein Nova-1-like isoform X1 n=11 Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 293..367
e-value: 8.0E-8
score: 42.0
coord: 408..482
e-value: 1.6E-9
score: 47.6
coord: 726..799
e-value: 1.4E-9
score: 47.8
IPR004088K Homology domain, type 1PFAMPF00013KH_1coord: 411..475
e-value: 1.4E-8
score: 34.4
coord: 298..362
e-value: 9.7E-10
score: 38.1
coord: 730..795
e-value: 7.3E-14
score: 51.3
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 294..370
e-value: 1.2E-14
score: 55.8
coord: 406..485
e-value: 3.4E-14
score: 54.4
IPR036612K Homology domain, type 1 superfamilyGENE3D3.30.1370.10K Homology domain, type 1coord: 728..798
e-value: 2.2E-19
score: 71.1
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 403..490
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 297..369
IPR036612K Homology domain, type 1 superfamilySUPERFAMILY54791Eukaryotic type KH-domain (KH-domain type I)coord: 731..801
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..655
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..831
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 812..841
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 149..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 596..656
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..253
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 200..227
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 50..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..296
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..294
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 549..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..186
NoneNo IPR availablePANTHERPTHR10288:SF261PASILLA, ISOFORM Rcoord: 286..804
NoneNo IPR availablePANTHERPTHR10288KH DOMAIN CONTAINING RNA BINDING PROTEINcoord: 286..804
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 294..362
score: 14.571094
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 727..794
score: 17.736538
NoneNo IPR availablePROSITEPS50084KH_TYPE_1coord: 409..478
score: 13.627749
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 297..363
e-value: 7.37054E-14
score: 64.8051
NoneNo IPR availableCDDcd02396PCBP_like_KHcoord: 411..478
e-value: 5.39297E-14
score: 65.1903
NoneNo IPR availableCDDcd00105KH-Icoord: 731..795
e-value: 2.3865E-13
score: 63.3479

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig819contigA-nodosum_M_contig819:231441..293065 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig819.17.1mRNA_A-nodosum_M_contig819.17.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig819 229660..294065 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig819.17.1 ID=prot_A-nodosum_M_contig819.17.1|Name=mRNA_A-nodosum_M_contig819.17.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=842bp
MGERFVERRAACAGMNMTSAEPALHIMTHQPSIQRTFGMPSASNEGAVSG
EGKKVTSTGVSTSSPRVEIITDNANEQTASNLTPSTSYATPQTGSSASSE
SQMLSFGRAEATSPGKGGFSTGVEDGGSGTVKGQGRRVLDGSARPLVGAP
QHSTRQSQDAFQEGGGQGPSFDALQPQPNQSREGWMNQVPRRGGAVAGTG
GGTISSSSGVVIGSVGPQQQQQTGGEVVEAGEASIEAATAKLRLDDGDND
VDGVGHVNRGTIDGGGGEDQRDQRSRGEHWKHGSSGEEREPQPKFGLKVL
IPGLTAGCLIGKGGRIINQLQTTTGTRVKLSQKNEFFPGTHDRVALVQGE
QPTMVGEAVAEMLRRLREAGRQHPHSTQSMVMGGPYGPYGFHLGGGGFTG
GGMEGRNSQVTVRLLVPLAAGGLIIGKGGETIKAIGARTGARVILAGKDA
DVAGVPSERMCSIQGDLEGAIKVVLMIVGKMAEDRGLSKYQSNQTCYQTG
LVGPLTPGMVVDGSHQPQNLPVSNAMPVQAHWGRPNRSLSGGVEMGTFPV
EHHTGSGNPWGGVNDTGSSVDGPGGVMGPAPAPVCGLANGVSTPSASGGC
GMGGPQQRLQQPQQQQPQQQQPQQQQPQQQQPQQQQPQSPPQHQIPQQQH
VALATSSHVPGMVPLYGFPFPFPAMQPQRPFGDAYAQGNIAGMPSVYPYG
SEIAFMTPTGSPQGPVPEIYMDGGEMLAQTQVAVPDNMVGVILGKGGATV
IDMQNITGARIQVSQRGDYIPGTHNRAVTISGTQQAVASAQAMLHNVCAQ
ASQYEVRQVQGIHQVQPHQMHQQQTHQSQQFPPPHQQPPFY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004087KH_dom
IPR004088KH_dom_type_1
IPR036612KH_dom_type_1_sf