prot_A-nodosum_M_contig818.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig818.4.1
Unique Nameprot_A-nodosum_M_contig818.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length805
Homology
BLAST of mRNA_A-nodosum_M_contig818.4.1 vs. uniprot
Match: D8LCN8_ECTSI (Heat shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 783 bits (2021), Expect = 2.530e-273
Identity = 478/825 (57.94%), Postives = 577/825 (69.94%), Query Frame = 0
Query:    1 MALSTSMAAGA---GAGGAGLTLNPGMNFGANALAAPQAFSSFEPPPTAGPQADMGTGGRGAGGA-YDLRSW----EKEDLPEEDHHACLGMDVGTSSIKACLYLRDGGCKAIGGKG-LPASILVDSKVGVKGVRRWLKTRASGGDAESSTPPKGVKLFHAPS-------TAAGAAASAAATSEEKCEVVWPLRLMTLRGKEGTKAMHRVKSSLRHDIKIAPENSTEAED----AESSGVKVLLSSPEAKDSKDREVWCSPEEILAMLIAGVKAKAEDAHGVVVRTCFFTAPSCLGDLHRVALQRAAFMAGLIPGRFVGAALAATVGYLWGRCGSTTAELKEPQDLILSVGMGASFLDVAVVSP-KNASPDTNPDVLLSPAPSASAKXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGSMEYRVTASVGDPACGGLDMDYLVARALLAAIEDSEDSDSGGVEVASDRTLWRNLLSSANQLRERLSSEPKASCFLKAGCCDADPSFSHNLELSRTELEDAIAGTMDVFRKSLRTALDRSNALPGQVKVVVLYGECSKTQAVVEEIIKTFDKAQIEHAVPGDCSKGAALLLAEERDLLPATSVKARDALSHKLGLVDRTKKGGEAMVKDLFPEGSPVPTSSVQTFDRKSAGA-GLLMDVEVVEWVEGAAIKDTKDASSTTTTPGAGRWVTVQRLGNPLAMQDDSGYPILAEEVKIRFTLDDCGICVTEVESSVVPKKKGGHGPMRRCFNVVMVLLLVFGILGGGYWMLHRLETAGERHQAAARVRLTAFYEKNNPDKLSTIEETLARYRGRESVLFQRLEKQYGKPVP 803
            M+LST+  AG    G GGAG+ + PGM FG   +  P   S+F PP                    YDLR+     E+E+L +ED HACLG+DVGTSSIKACLYL+DGGCK +GGK  LPA IL+D K GVKGVRRWLK+RA GG A ++ P KGVKLFHA                           VVWPLRL+ LRGK G +A  RV+SSLRHDI+++   S EA D     ++SGV+VLL+SP+A ++KDREVW +PEE+LAML+AGVKAKAE+AHGV+++TC  +AP CLGDLHRVALQR+ F+AG++PGRFVG+ LAA VGYLWGR   +  ELK P DLIL+VGMGASFLDV++++P + ASP +        A SA   XXXXXXXXXXXXXXXXXXXXXXXXX  ++  MEYRV AS GD ACGGLDMDYLVARALLAA+EDS      G EVASDR LWRNLL SA  LRERLS++PK+S  LK GCCDADP+F H+LE                                  VK VVLYG C+KT A++EE++K F  AQIEH   GDC+KGAALLLA  R LL A  V   DALSHKLGLVDR+KKG EA+  +LFP GS VP+S  + F RKSAG+ GL +D+E+VEW+EG    +   ASS       G WVTVQRLGNPLAMQDD GYP+LAEEV   F+LD+CGICV EVESSV+PKK GG G +RR  N  +++ +VFG+ GGGYW+L+RLE AGER QA+AR+RLT FYE++NP+KLST+E+ LARY+GRE +LFQRL+KQYGKP+P
Sbjct:    1 MSLSTAGVAGGIAPGGGGAGMAMGPGMAFGGTGMGTP---STFRPPXXXXXXXXXXXXXXXXXXXXYDLRAAACEAEEEEL-DEDTHACLGVDVGTSSIKACLYLKDGGCKTVGGKAPLPAGILIDRKTGVKGVRRWLKSRAGGGQAPAA-PAKGVKLFHAVGGXXXXXXXXXXXXXXXXXXDGNGAAVVWPLRLLALRGK-GAEATQRVQSSLRHDIEVSSVESKEATDDQGDGDTSGVRVLLTSPDAAETKDREVWVTPEEVLAMLLAGVKAKAEEAHGVMIKTCNLSAPGCLGDLHRVALQRSVFLAGMVPGRFVGSPLAAAVGYLWGR---SNPELKGPDDLILAVGMGASFLDVSLIAPTREASPPS--------ADSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAEAQGMEYRVRASAGDSACGGLDMDYLVARALLAAVEDSS-----GPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLE----------------------------------VKTVVLYGSCAKTPALLEEVVKMFLDAQIEHPGVGDCAKGAALLLAGSRGLLNALPVTGHDALSHKLGLVDRSKKGAEAV--ELFPTGSRVPSSITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGERGSASS------GGTWVTVQRLGNPLAMQDDRGYPVLAEEVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRRLLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLTNFYEQHNPEKLSTVEDALARYKGREDILFQRLKKQYGKPIP 761          
BLAST of mRNA_A-nodosum_M_contig818.4.1 vs. uniprot
Match: A0A835Z170_9STRA (Hsp70 protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z170_9STRA)

HSP 1 Score: 262 bits (670), Expect = 4.160e-73
Identity = 254/759 (33.47%), Postives = 359/759 (47.30%), Query Frame = 0
Query:   58 GAGGAYDLRSWEKEDL-PEEDHHACLGMDVGTSSIKACLYLRDGGCKAIGGKG-LPASILVDSKVGVKGVRRWLKTRASGGDAESSTPPKGVKLFHAPSTAAGAAASAAATSEEKCEVVWPLRLMTLRGKEGTKAMHRVKSSLRHDIKIAPENSTEAEDAESSGVKVLLSSPEAKDSKDREVWCSPEEILAMLIAGVKAKAEDAHGVVVRTCFFTAPSCLGDLHRVALQRAAFMAGLIPGRFVGAALAATVGYLWGRCGSTTAELKEPQDLILSVGMGASFLDVAVVSPKNASPDTNPDVLLSPAPSASAKXXXXXXXXXXXXXXXXXXXXXXXXXXGKSGSMEYRVTASV-GDPACGGLDMDYLVARALLAAIEDSEDSDSGGVEVASDRTLWRNLLSSANQLRERLSSEPKASCFLKAGCCDADPSFSHNLELSRTELEDAIAGTMDVFRKSLRT-ALDRSNALPGQVKVVVLYGECSKTQAVVEEIIKTFDKAQIEHAVPGDCSKGAALLLAEERDLLP-------------------ATSVKARDALSHKLGLVDRTKKGGEAMVKDLFPEGSPVPTSSVQTFDRKSAGAGLLMDVEVVEWVEGAAIKDTKDASSTTTTPGAGRWVTVQRLGNPLAMQDDSGYPILAE-----------EVKIRFTLDDCGICVTEVESSVVPKKKGGHGPMRRCFNVVMVLLLVFGILGGGYWMLHRLETAGERHQAAARVRLTAFYEKNNPDKLSTIEETLAR 782
            GAGGAYDLR     D  P+ED  ACLG+ +G ++  ACLYL D G   + G+  LPA++ +D K G +G+R+W K      D+ S   PK V +       AG              V   +RL+  R + G  A+ R  ++   ++  A      A+D   SGV + L     ++ +     C PE +LA L+  ++ KA  A  V   TC FT P+  GD  RVALQRA F+AG+ P RFV A LAA VG L    G               +  GA    VA V                                       XXXXXXXXXXX  +G++E   TA+V GD   GG DMDYL+ARAL AA+ED+      G E A +   ++ L+++A   RE LS E +A+  L AG   + P      ++SR ELE A+A  ++   + LR  A   +   P +  VVV  G      A+ + +   F KA++      + ++GAALLLA ER +L                    A +V+A DAL  ++ LV     GG   V  LF +G+ +P ++ + FD  + G     +V  V+ V         DA+ +  T      VTV  LG+PL   DD GYP LA             V + FT+D+CGI  +EV+  VVP KK  +  M+R  N + ++  +  ++ GGY+ L  L     +  A AR +LT FYE  NP KL+T+E+T+ R
Sbjct:   51 GAGGAYDLRGQAAADAGPQEDLSACLGVALGATTYSACLYLADKGAVPLTGRAPLPAALWLDPKTGARGLRKWAKR-----DSRSGALPKAVTVGLRGEGEAGL-----------LRVPAGMRLLGARHRPG--ALLREAAAWPVELVEAARGDDAADDT--SGVHICLPGEAGQEWRA----CEPEHLLAALLVSLRLKAAAAFKVECVTCNFTVPAWFGDAPRVALQRAVFLAGMRPARFVSAPLAAAVGALHSEKGG--------------LARGADGGAVAAVR------------------------------------VGXXXXXXXXXXXAAAGALE---TAAVRGDAGAGGGDMDYLLARALQAALEDAH-----GAEAAQEG--FKALVAAARSAREALSEEAEATVHLPAGSLPSQPEVEFTTKVSRGELEQAVAPLLERISEMLRDIAAAAAGGAPVRT-VVVSGGVALAMPALQKAVAAAFPKAEVTRTDGTEAARGAALLLASERGVLRGVDALAKARGLRVAHPLSGAAAVQAADALPLQISLVTG---GGSPEV--LFAQGTRLPATTERCFDA-AQGHRAGTEVRAVQTV---------DAAGSDVTAAL---VTVADLGDPLNQYDDRGYPALATXXXXXXXXXXTRVTLEFTVDECGILSSEVKDVVVPVKKS-NDKMKRMLNALALVAALLALIVGGYFQLQALAEKPAKDMARAREKLTKFYEVVNPAKLTTVEDTVKR 705          
BLAST of mRNA_A-nodosum_M_contig818.4.1 vs. uniprot
Match: A0A7S2SLN9_9STRA (Conserved oligomeric Golgi complex subunit 3 n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SLN9_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 1.350e-5
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:  751 ERHQAAARVRLTAFYEKNNPDKLSTIEETLARYRGRESVLFQRLEKQYGKPV 802
            E    + R RL AFY+K NP+KL  ++ TLA++ GRE VLFQ+L K+YG P+
Sbjct:  500 ETSTPSPRARLVAFYKKFNPEKLDMVDSTLAKFTGREEVLFQKLSKKYGVPI 551          
BLAST of mRNA_A-nodosum_M_contig818.4.1 vs. uniprot
Match: A0A0N7L4X7_PLAHL (Uncharacterized protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L4X7_PLAHL)

HSP 1 Score: 57.8 bits (138), Expect = 9.550e-5
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  758 RVRLTAFYEKNNPDKLSTIEETLARYRGRESVLFQRLEKQYGKPVP 803
            R RLTAFY++ NP KLS ++ TLA+Y+GRE  LFQ LE++Y K  P
Sbjct:  954 RDRLTAFYQQYNPSKLSAVDTTLAKYKGREDQLFQMLEQKYVKKTP 999          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig818.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCN8_ECTSI2.530e-27357.94Heat shock protein 70 n=1 Tax=Ectocarpus siliculos... [more]
A0A835Z170_9STRA4.160e-7333.47Hsp70 protein-domain-containing protein n=1 Tax=Tr... [more]
A0A7S2SLN9_9STRA1.350e-551.92Conserved oligomeric Golgi complex subunit 3 n=2 T... [more]
A0A0N7L4X7_PLAHL9.550e-558.70Uncharacterized protein n=1 Tax=Plasmopara halsted... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013126Heat shock protein 70 familyPFAMPF00012HSP70coord: 238..342
e-value: 8.3E-7
score: 27.6
coord: 400..564
e-value: 1.0E-10
score: 40.5
NoneNo IPR availableGENE3D3.30.420.40coord: 321..555
e-value: 1.1E-27
score: 98.7
NoneNo IPR availableGENE3D3.90.640.10Actin; Chain A, domain 4coord: 412..504
e-value: 1.1E-27
score: 98.7
NoneNo IPR availableGENE3D3.30.420.40coord: 157..564
e-value: 1.1E-27
score: 98.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 37..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 205..226
NoneNo IPR availablePANTHERPTHR45639HSC70CB, ISOFORM G-RELATEDcoord: 196..625
IPR043129ATPase, nucleotide binding domainSUPERFAMILY53067Actin-like ATPase domaincoord: 396..553
IPR043129ATPase, nucleotide binding domainSUPERFAMILY53067Actin-like ATPase domaincoord: 82..311

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig818contigA-nodosum_M_contig818:78144..114631 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig818.4.1mRNA_A-nodosum_M_contig818.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig818 76990..114810 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig818.4.1 ID=prot_A-nodosum_M_contig818.4.1|Name=mRNA_A-nodosum_M_contig818.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=805bp
MALSTSMAAGAGAGGAGLTLNPGMNFGANALAAPQAFSSFEPPPTAGPQA
DMGTGGRGAGGAYDLRSWEKEDLPEEDHHACLGMDVGTSSIKACLYLRDG
GCKAIGGKGLPASILVDSKVGVKGVRRWLKTRASGGDAESSTPPKGVKLF
HAPSTAAGAAASAAATSEEKCEVVWPLRLMTLRGKEGTKAMHRVKSSLRH
DIKIAPENSTEAEDAESSGVKVLLSSPEAKDSKDREVWCSPEEILAMLIA
GVKAKAEDAHGVVVRTCFFTAPSCLGDLHRVALQRAAFMAGLIPGRFVGA
ALAATVGYLWGRCGSTTAELKEPQDLILSVGMGASFLDVAVVSPKNASPD
TNPDVLLSPAPSASAKTAETVAAGGGKKKKKKGAGAGAGASAGKSGSMEY
RVTASVGDPACGGLDMDYLVARALLAAIEDSEDSDSGGVEVASDRTLWRN
LLSSANQLRERLSSEPKASCFLKAGCCDADPSFSHNLELSRTELEDAIAG
TMDVFRKSLRTALDRSNALPGQVKVVVLYGECSKTQAVVEEIIKTFDKAQ
IEHAVPGDCSKGAALLLAEERDLLPATSVKARDALSHKLGLVDRTKKGGE
AMVKDLFPEGSPVPTSSVQTFDRKSAGAGLLMDVEVVEWVEGAAIKDTKD
ASSTTTTPGAGRWVTVQRLGNPLAMQDDSGYPILAEEVKIRFTLDDCGIC
VTEVESSVVPKKKGGHGPMRRCFNVVMVLLLVFGILGGGYWMLHRLETAG
ERHQAAARVRLTAFYEKNNPDKLSTIEETLARYRGRESVLFQRLEKQYGK
PVPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013126Hsp_70_fam
IPR043129ATPase_NBD