prot_A-nodosum_M_contig818.23.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig818.23.1
Unique Nameprot_A-nodosum_M_contig818.23.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length204
Homology
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 305 bits (782), Expect = 1.850e-98
Identity = 159/240 (66.25%), Postives = 177/240 (73.75%), Query Frame = 0
Query:    2 KTLLLSPSRRLPPLPSRQEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            K L   P+  + P P  +EKERFTLCLAV ADG KVPLRIIFKGT F+PP TPGKGKATQPRKNSIA E+LPANRSK+G                                     +++QR CILVLDDFKCHK +GF+A LKR+A+TIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT+++A    DP+TGKL PPGRG VA WCK+A ASITPETVKTCFKICGLTLALDGSEDHA
Sbjct:  246 KPLPYPPTSCILPPPPGKEKERFTLCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 485          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 301 bits (771), Expect = 9.930e-97
Identity = 157/234 (67.09%), Postives = 174/234 (74.36%), Query Frame = 0
Query:    8 PSRRLPPLPSRQEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            P RR+P  P    +ERFTLCLAV ADG+KVPLRIIFKGT F+PP TPGKGKATQPRKNSIA E+LPANRSK+G                                     I++QR CILVLDDFKCHK +GF+A LKR+A+TIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYT+++A    DP+TGKL PPGRG VA WCK+A ASITPET KTCFKICGLTLALDGSEDHA
Sbjct:  262 PVRRMPASPP---EERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHA 492          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5L4U1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U1_9PHAE)

HSP 1 Score: 270 bits (691), Expect = 1.880e-88
Identity = 145/223 (65.02%), Postives = 161/223 (72.20%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSK------------------------------------NG-IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            +EKERFTL LAVMADG+KV  RIIFKGT FIPP   GKGK+T PRKNS+A EI PANR+K                                    NG I++QRPCILVLDDFKCHK EGF+A LKR A+TI+IFIPGG+T LLQPLDR+LNKQMKRLLRG YT+YSAS   D R+GKLKPP RGVV+ WCK+A  SITPETVKTCF IC LTLALDGSEDHA
Sbjct:   11 KEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEIHPANRAKHAHPANGMSFGVQGKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIIIFIPGGMTLLLQPLDRLLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCFMICRLTLALDGSEDHA 233          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 5.420e-88
Identity = 147/223 (65.92%), Postives = 160/223 (71.75%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            +EKERFTLCLAV ADG+KVPLRIIFKGT F+PP TPGKGKATQPRKNSIA E+LPANRSK+G                                     I++QR CILVLDDFKCHK +GF+A LKR+A+TIVIFIPGGLTPLLQ LDRMLNKQMKRLL              P+TGKL PPGRG VA WCK+A ASITPETVKTCFKICGLTLALDGSEDHA
Sbjct:  275 KEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHA 497          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.730e-86
Identity = 145/223 (65.02%), Postives = 159/223 (71.30%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            +EKERFTL LAVMADG+KV  RIIFKGT F PP   GKGK+T PRKNS+A EI PANR+K+G                                     I++QRPCILVLDDFKCHK EGF+A LKR A+TIVIFIPG LTPLLQPLDRMLNKQMKRLLR  YT+YSAS   D R+GKLKPP RGVV+ WCK+A  S TPETVKTCF ICGLTLALDGSEDHA
Sbjct:  150 KEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHA 372          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5KII4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KII4_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 2.820e-86
Identity = 145/223 (65.02%), Postives = 159/223 (71.30%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            +EKERFTL LAV ADG+KV LRIIF GT FIPP   GKGK+T PRKNS+A E+ P NR+K+G                                     I++QRPCILVLDDFKCHK EGF+A LKR A+TIVIFIPGGLTPLLQPLDRMLNKQ KRLLR  YT+YSAS   D R+GKLKPP RGVV+ WCK A  SITPETVKTCFKICGLTLALDGSEDHA
Sbjct:   84 EEKERFTLVLAVTADGKKVSLRIIFMGTPFIPPTVSGKGKSTLPRKNSVAWEMHPTNRAKHGHPANGMSFGVQEKSWSDQRECNGWTSGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQTKRLLRSKYTAYSASAT-DARSGKLKPPERGVVSTWCKGAWESITPETVKTCFKICGLTLALDGSEDHA 305          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 2.800e-84
Identity = 144/215 (66.98%), Postives = 160/215 (74.42%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLA 196
            +EKERFTLCLAV ADG+KVPLRIIFKGT F+PP TPGKGKATQPRKNSIA E+LPANRSK+G                                     I++QR CILVLDDFKCHK +GF+A LKR+A+TIVIFIPGGL PL QPLDRMLNKQMKRLLRGMYT+++A    DP+TGKL PPGRG VA WCK+A ASITPE VKTCFKICGLTLA
Sbjct:  304 KEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTLA 518          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 263 bits (671), Expect = 1.300e-83
Identity = 149/252 (59.13%), Postives = 163/252 (64.68%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSK------------------------------------NG-IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETV-----------------------------KTCFKICGLTLALDGSEDHA 204
            +EKERFTL LAVMADG+KV  RIIFKGT FIPP   GKGK+T PRKNS+A EI PANR+K                                    NG I++QRPCILVLDDFKCHK EG++A LKR A+TIVI IPGGLTPLLQPLDRMLNKQMKRLLRG YT+YSAS   D R+GKLKPP RGVV+ WCK+A  SITPETV                             KTCFKICGLTLALDGSEDHA
Sbjct:  150 KEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHA 401          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5JE48_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE48_9PHAE)

HSP 1 Score: 261 bits (666), Expect = 7.590e-83
Identity = 133/209 (63.64%), Postives = 156/209 (74.64%), Query Frame = 0
Query:   19 QEKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKN-----------------------GIIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            +EK+RFTLCLAVMADG KVPLRIIFKG  FIPP T G+GK TQPRK SIAAE+LPANR+K                         +IKQR  ILVLDDF+ H+ E F+ DL+R+ +T VI IPGGLTPLLQPLDRMLNK++KRL+RG  T Y AS   DP+TGKL+PPGRG+V+  CK++ A+ITPETVK CFK+CGLTLALDGSED A
Sbjct:  198 KEKDRFTLCLAVMADGGKVPLRIIFKGKPFIPPSTAGRGKNTQPRKGSIAAEVLPANRTKRKAGVTRECTLWLSERWRFWPNHGSVIKQRHSILVLDDFRYHRSESFIEDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEIKRLMRGRCTQYMASAIADPKTGKLQPPGRGLVSTRCKESWAAITPETVKKCFKVCGLTLALDGSEDDA 406          
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 266 bits (681), Expect = 2.660e-82
Identity = 142/222 (63.96%), Postives = 158/222 (71.17%), Query Frame = 0
Query:   20 EKERFTLCLAVMADGQKVPLRIIFKGTLFIPPRTPGKGKATQPRKNSIAAEILPANRSKNG-------------------------------------IIKQRPCILVLDDFKCHKGEGFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSASVKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGSEDHA 204
            EKERFTL LAV ADG+KV  RIIF+GT FIPP   GKGK+T+PRKN +A E+ PANR+K+G                                     I++QRP ILVLDDFKCH  EGF+A LKR A+TIVIFIPGGLTPLLQPLDRMLNKQMKRLLRG YT+YS S   D R+GKLKPP RGVV+ WCK+A  SITPETVKTC KICGLTLALDGSEDHA
Sbjct:  346 EKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig818.23.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KE45_9PHAE1.850e-9866.25DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE9.930e-9767.09DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4U1_9PHAE1.880e-8865.02DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE5.420e-8865.92DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.730e-8665.02DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KII4_9PHAE2.820e-8665.02DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE2.800e-8466.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE1.300e-8359.13DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JE48_9PHAE7.590e-8363.64DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE2.660e-8263.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 83..188
e-value: 1.1E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR19303TRANSPOSONcoord: 18..204
NoneNo IPR availablePANTHERPTHR19303:SF7SUBFAMILY NOT NAMEDcoord: 18..204

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig818contigA-nodosum_M_contig818:291381..292103 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig818.23.1mRNA_A-nodosum_M_contig818.23.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig818 291381..292103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig818.23.1 ID=prot_A-nodosum_M_contig818.23.1|Name=mRNA_A-nodosum_M_contig818.23.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=204bp
SKTLLLSPSRRLPPLPSRQEKERFTLCLAVMADGQKVPLRIIFKGTLFIP
PRTPGKGKATQPRKNSIAAEILPANRSKNGIIKQRPCILVLDDFKCHKGE
GFVADLKRKADTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTSYSAS
VKGDPRTGKLKPPGRGVVAKWCKDALASITPETVKTCFKICGLTLALDGS
EDHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom