prot_A-nodosum_M_contig8.31.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.31.1
Unique Nameprot_A-nodosum_M_contig8.31.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length138
Homology
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A6H5JL03_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JL03_9PHAE)

HSP 1 Score: 202 bits (513), Expect = 1.710e-62
Identity = 106/137 (77.37%), Postives = 120/137 (87.59%), Query Frame = 0
Query:    1 MPASEFFKQEARSGXXXXXXXXXXPGKLTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITNS 137
            MPASEFFKQEAR+G          PGKLT EQHVRIQQIR+RKKEME+KYLTVVEEHVDRLGEMAKNIQEELQIQDRMV D+GNRIDTAQ+HV+NVN R+K+VL+ VRSADKFC+DIMCILLLLG++AVLY V+  +
Sbjct:  157 MPASEFFKQEARTGGMTAVAEAPPPGKLTPEQHVRIQQIRDRKKEMEDKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVDDLGNRIDTAQEHVANVNKRMKEVLKNVRSADKFCMDIMCILLLLGMIAVLYAVVKET 293          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A835YY22_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY22_9STRA)

HSP 1 Score: 141 bits (355), Expect = 1.110e-38
Identity = 71/113 (62.83%), Postives = 94/113 (83.19%), Query Frame = 0
Query:   25 PGKLTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITNS 137
            P  L++EQH RIQQIRER KEME  YL+ +EEHVDRLG++A+ + EEL +Q+RM+ D+GNRI++ Q+ ++NVN R+KD L++VR+ADKFCVDIMC+LL+LGL AVLY VI N 
Sbjct:  183 PANLSNEQHYRIQQIRERSKEMENTYLSKIEEHVDRLGDLARGMGEELVLQERMLDDLGNRIESTQEKLANVNVRMKDTLKKVRAADKFCVDIMCVLLMLGLAAVLYAVIKNG 295          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S2UZ99_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ99_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.370e-21
Identity = 45/110 (40.91%), Postives = 81/110 (73.64%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITNS 137
            +T++Q  R++Q++ R K+M++++LT + E VD + E+A    EE+++Q  M+ ++GNRID A  H  +VNT+LK+ L++VR ADK C+DI+CI++++ +V ++Y +  NS
Sbjct:    7 MTADQRRRLEQLQIRDKQMDDEHLTKIGEAVDDIKEIALAANEEVKLQSVMIDNLGNRIDIANTHAESVNTKLKETLKKVRGADKLCMDIICIVIMVAMVGIIYSLYKNS 116          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S2RAR9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAR9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 4.440e-19
Identity = 48/123 (39.02%), Postives = 83/123 (67.48%), Query Frame = 0
Query:    8 KQEARSGXXXXXXXXXXPGKLTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVL 130
            +Q A SG            +++S+Q+ R+ QI+   +EM+ K + ++ E V+ LG +AK + EELQ+Q +M+ ++   ++ AQ+HVSN+N ++ D L++VR +DK C+DI+C+LLLLGL+ V+
Sbjct:  185 QQSASSGGQGAASVVVEQERISSQQNQRLAQIQATDREMD-KTIELIGERVEDLGGIAKQMNEELQVQSKMIDELDQAVEKAQEHVSNINAQVADTLKKVRDSDKLCIDILCLLLLLGLIGVM 306          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S3PYZ1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYZ1_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 8.340e-18
Identity = 48/110 (43.64%), Postives = 76/110 (69.09%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITNS 137
            LT +QH+++QQI +R KE +++ L  + E +  L E+A         Q+ M  ++G +ID AQ+H+S VNT++KD L +VR+ADK CVD+MCI+L++G+ AVLY +I + 
Sbjct:  227 LTQQQHLQLQQINDRDKEFDQE-LDQIGEGIQDLSELAXXXXXXXXRQNVMXXNVGQKIDDAQEHLSTVNTKMKDTLNEVRAADKICVDVMCIVLMVGMAAVLYKMIASG 335          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S2Q5H6_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q5H6_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 7.220e-17
Identity = 48/111 (43.24%), Postives = 77/111 (69.37%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQV-RSADKFCVDIMCILLLLGLVAVLYGVITNS 137
            +T  Q V++QQIR+R  E ++  L  + E +  L E+A    EE++ Q++M+ ++G++ID A +H+ NVN ++KD L +V RS+DK CVDIMCI+L +GL+AV+Y + T  
Sbjct:   37 MTGSQQVQLQQIRDRDAEFDQD-LDEIGEGIQDLHELALRQGEEVKRQNQMLQEVGSKIDNAHEHMINVNAKMKDTLNEVGRSSDKLCVDIMCIVLGIGLIAVIYKMATGG 146          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S1TVQ5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVQ5_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 1.960e-15
Identity = 43/109 (39.45%), Postives = 71/109 (65.14%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITN 136
            +T+EQ  ++Q +  R+ E++EKY+  + E +D L E A+N  E L+ QDR +T++  + D   D +  VN  +K+ L + R +DK C+DIMCI+ +LGL+ VLY + T+
Sbjct:  187 MTAEQKQQLQALEARENEIDEKYVAQIGEGLDYLLEKAENFGERLREQDRKITEIQEKADEVTDRLETVNGSMKETLNKARGSDKICMDIMCIMAMLGLIGVLYQMTTS 295          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: B8LD27_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LD27_THAPS)

HSP 1 Score: 80.5 bits (197), Expect = 3.600e-15
Identity = 50/105 (47.62%), Postives = 71/105 (67.62%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQV-RSADKFCVDIMCILLLLGLVAVLY 131
            LT  Q V++QQIR+R  E ++  L  + E +  L E+A+   EE+Q Q+ M+  +GN+ID A +H+ NVN ++KD L +V RS+DK CVDIMCILL +G  AV Y
Sbjct:  257 LTGSQQVQLQQIRDRDAEFDQD-LDQIGEGIQDLHELAQRQGEEVQRQNVMLNQVGNKIDNAHEHMVNVNAKMKDTLNEVGRSSDKLCVDIMCILLAVGFGAVFY 360          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S3XQY8_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQY8_HETAK)

HSP 1 Score: 76.3 bits (186), Expect = 3.900e-15
Identity = 38/105 (36.19%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQVRSADKFCVDIMCILLLLGLVAVLYG 132
            +T+EQ  R++ +++R +E + ++LT +E+ V+   E+A    EE++ Q  ++  + ++++   +H    N RLKDV++QVR ADKFC+DI C++L+LG++ +LY 
Sbjct:   17 VTAEQQRRLELLQQRDREQDAEHLTRIEQGVEDALEIALVANEEVKRQGVLLDQLDDKLEAVTEHADTTNRRLKDVIKQVRGADKFCMDIFCVVLMLGMLGILYS 121          
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Match: A0A7S2XIT6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIT6_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.630e-13
Identity = 47/105 (44.76%), Postives = 72/105 (68.57%), Query Frame = 0
Query:   28 LTSEQHVRIQQIRERKKEMEEKYLTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRLKDVLRQV-RSADKFCVDIMCILLLLGLVAVLY 131
            LT  Q  +IQ ++ER  E + + L  + E +  L E+A+   EE++ Q++M+ DMG ++D+  +HV NVN +LKD L++V RS+DK CVDIMCI+L+LG   VL+
Sbjct:  205 LTGGQQSQIQALQERDAEFDTQ-LDDIGEGIQDLAEIAELQSEEVKRQNQMLDDMGIKMDSVHEHVQNVNLKLKDTLKEVGRSSDKLCVDIMCIVLMLGFAGVLF 308          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.31.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL03_9PHAE1.710e-6277.37t-SNARE coiled-coil homology domain-containing pro... [more]
A0A835YY22_9STRA1.110e-3862.83Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2UZ99_9STRA1.370e-2140.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RAR9_9STRA4.440e-1939.02Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3PYZ1_9STRA8.340e-1843.64Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S2Q5H6_9STRA7.220e-1743.24Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S1TVQ5_9STRA1.960e-1539.45Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
B8LD27_THAPS3.600e-1547.62Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S3XQY8_HETAK3.900e-1536.19Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2XIT6_9STRA1.630e-1344.76Hypothetical protein n=1 Tax=Attheya septentrional... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 36..56
NoneNo IPR availableGENE3D1.20.5.110coord: 49..110
e-value: 1.8E-10
score: 42.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availablePANTHERPTHR19957:SF321PUTATIVE-RELATEDcoord: 29..130
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 48..101
e-value: 8.60697E-8
score: 44.0864
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 32..104
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 78..128
e-value: 8.7E-9
score: 35.3
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 41..103
score: 9.678371
IPR045242SyntaxinPANTHERPTHR19957SYNTAXINcoord: 29..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:334316..342088 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.31.1mRNA_A-nodosum_M_contig8.31.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 334171..342273 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.31.1 ID=prot_A-nodosum_M_contig8.31.1|Name=mRNA_A-nodosum_M_contig8.31.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=138bp
MPASEFFKQEARSGGAAAAAEAPPPGKLTSEQHVRIQQIRERKKEMEEKY
LTVVEEHVDRLGEMAKNIQEELQIQDRMVTDMGNRIDTAQDHVSNVNTRL
KDVLRQVRSADKFCVDIMCILLLLGLVAVLYGVITNS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
IPR045242Syntaxin