prot_A-nodosum_M_contig8.26.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig8.26.2
Unique Nameprot_A-nodosum_M_contig8.26.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length214
Homology
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A6H5KFM7_9PHAE (RING-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFM7_9PHAE)

HSP 1 Score: 234 bits (596), Expect = 1.220e-70
Identity = 116/139 (83.45%), Postives = 121/139 (87.05%), Query Frame = 0
Query:    1 MPISRCPCCDQDFGPDDGLFILPVEPYSAGMLFGDDARRGREDQHH-RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAA 138
            MPI RCP CD DFG DDGLFILPVEPYSA   F +D R+G + +H  RTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC  RPMGEE  AKHREAQKRLSDLEEMFL A
Sbjct:  106 MPIVRCPVCDMDFGNDDGLFILPVEPYSATNFFEEDERKGGDREHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMA 244          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: D8LER0_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LER0_ECTSI)

HSP 1 Score: 238 bits (607), Expect = 1.970e-70
Identity = 118/139 (84.89%), Postives = 123/139 (88.49%), Query Frame = 0
Query:    1 MPISRCPCCDQDFGPDDGLFILPVEPYSAGMLFGDDARRGREDQHH-RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAA 138
            MPI RCP CD DFG DDGLFILPVEPYSA  LF +D R+GR+ +H  RTGRWHSYETMYAQRIVADF+AGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRC  RPMGEE  AKHREAQKRLSDLEEMFL A
Sbjct:  106 MPIVRCPVCDMDFGNDDGLFILPVEPYSATNLFEEDERKGRDAEHQSRTGRWHSYETMYAQRIVADFDAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCPGRPMGEEHIAKHREAQKRLSDLEEMFLMA 244          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: D8LLI7_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLI7_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 8.190e-55
Identity = 104/151 (68.87%), Postives = 115/151 (76.16%), Query Frame = 0
Query:    1 MPISRCPCCDQDFGP--DDGLFILPVEPYS-AGMLFGDD-------ARRGREDQHHRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAARAK 141
            MPI+RCP CDQ F    D GL ILPVEP+S AG   G+        AR G E Q  RTGRWHS+ETMYAQRIVADF+AGT+PL EGTKLGN LCNILNCSPSRLSKKLKIGKK FQ+ + RPM  E  A+HREAQKRLSDLEEMFL A ++
Sbjct:   61 MPITRCPVCDQAFPNTNDGGLLILPVEPFSDAGGATGESEDDSRTGAREGAETQT-RTGRWHSFETMYAQRIVADFDAGTLPLCEGTKLGNLLCNILNCSPSRLSKKLKIGKKCFQQREDRPMTPEHIARHREAQKRLSDLEEMFLMAESR 210          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A836CDJ8_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDJ8_9STRA)

HSP 1 Score: 136 bits (342), Expect = 7.890e-36
Identity = 70/140 (50.00%), Postives = 90/140 (64.29%), Query Frame = 0
Query:    1 MPISRCPCCDQDFGPDDGLFILPVEPYSAGMLFGDDARRGREDQHHRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAARA 140
            +P+S CP C  D    +GL +LPVEP++      + A     D   RTGRWH YET YAQ ++ DFEAGT+P+ EGTKL   LC +LNC+ +RLSKKLKIGK+++    TR    E  A H   Q+R+S+LEEMFL A A
Sbjct:   44 LPLSECPVCRADMTQSEGLQVLPVEPHN-----NEPAENA--DTELRTGRWHHYETQYAQHLMEDFEAGTLPIGEGTKLATLLCRLLNCNQTRLSKKLKIGKRFYAHGPTRIRTPEAIAAHSVRQRRISELEEMFLMAEA 176          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A835ZCD8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCD8_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.640e-26
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 0
Query:   47 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKIGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAA 138
            RTGRWHSYET+YAQ ++ DFEAGT+P+ EGTKL + LC +LNC+ +RLSKKLKIGK+++     R    E  A HR  Q+R+S+LEEMFL A
Sbjct:   68 RTGRWHSYETLYAQHVIDDFEAGTLPIGEGTKLASLLCRLLNCNQTRLSKKLKIGKRFYAHAPAREPTLEAIAAHRVRQRRVSELEEMFLMA 159          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A836CP88_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CP88_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 1.930e-10
Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 0
Query:   47 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFL 136
            R G+W   E  YA+R++A+F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R Q         A  R A+  L+ LE+ F+
Sbjct:    5 RRGKWTQEEDAYARRLIAEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFTGAHCIGKQVFRRDQAAVDARAPAAAAR-ARTELASLEQRFM 97          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A7S4J6Z5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J6Z5_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.780e-9
Identity = 37/94 (39.36%), Postives = 58/94 (61.70%), Query Frame = 0
Query:   47 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFL 136
            R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R +T  +      + +++++ LS+LE  FL
Sbjct:   40 RRGKWTPEEESYANRLILEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR-RTADINRLTPEQIQQSRQELSELERRFL 132          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: D8LTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTT9_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 2.030e-9
Identity = 44/115 (38.26%), Postives = 63/115 (54.78%), Query Frame = 0
Query:   31 MLFGDDARRGREDQHHRTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQ-----TRPMGEEDFAKHREAQKRLSDLEEMFL 136
            ML G    + ++    R G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R Q     + P+ EE   K R     L++LE  FL
Sbjct:  101 MLGGRGGHKKQKPPGLRRGKWTPEEEKYANRLIQEFKAGLLPLTDGTTLRTFLSIMLNCDPMRISKKFVGSNCIGKQVFRRQQGVDEDSSPLSEEAMDKSRAE---LAELERKFL 212          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A7S1D7J8_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7J8_CYCTE)

HSP 1 Score: 63.9 bits (154), Expect = 3.370e-9
Identity = 36/92 (39.13%), Postives = 56/92 (60.87%), Query Frame = 0
Query:   49 GRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFL 136
            G+W   E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R +T  +      + ++++  LS+LE  FL
Sbjct:    1 GKWTPEEEAYANRLIQEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGSNCIGKQVFRR-RTADINRLTSEQIQQSRAELSELERRFL 91          
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Match: A0A7S1BV59_9STRA (Hypothetical protein n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BV59_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 5.830e-9
Identity = 37/94 (39.36%), Postives = 59/94 (62.77%), Query Frame = 0
Query:   47 RTGRWHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLK----IGKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFL 136
            R G+W + E  YA R++ +F+AG +PL++GT L  FL  +LNC P R+SKK      IGK+ F+R +T  +      + +++++ LS+LE  FL
Sbjct:  146 RRGKWTAEEEAYANRLIKEFKAGLLPLTDGTTLRTFLSKLLNCDPMRISKKFVGGNCIGKQVFRR-RTADINSLTPEQIQQSREELSELERRFL 238          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig8.26.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KFM7_9PHAE1.220e-7083.45RING-type domain-containing protein (Fragment) n=1... [more]
D8LER0_ECTSI1.970e-7084.89RING-type domain-containing protein n=1 Tax=Ectoca... [more]
D8LLI7_ECTSI8.190e-5568.87RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A836CDJ8_9STRA7.890e-3650.00RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A835ZCD8_9STRA2.640e-2659.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CP88_9STRA1.930e-1041.49Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S4J6Z5_9STRA1.780e-939.36Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
D8LTT9_ECTSI2.030e-938.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1D7J8_CYCTE3.370e-939.13Hypothetical protein (Fragment) n=1 Tax=Cyclophora... [more]
A0A7S1BV59_9STRA5.830e-939.36Hypothetical protein n=4 Tax=Corethron hystrix Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 138..198
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..178
NoneNo IPR availablePANTHERPTHR35213FAMILY NOT NAMEDcoord: 47..179
NoneNo IPR availablePANTHERPTHR35213:SF3SUBFAMILY NOT NAMEDcoord: 47..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig8contigA-nodosum_M_contig8:254167..256248 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig8.26.2mRNA_A-nodosum_M_contig8.26.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig8 243134..260399 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig8.26.2 ID=prot_A-nodosum_M_contig8.26.2|Name=mRNA_A-nodosum_M_contig8.26.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=214bp
MPISRCPCCDQDFGPDDGLFILPVEPYSAGMLFGDDARRGREDQHHRTGR
WHSYETMYAQRIVADFEAGTMPLSEGTKLGNFLCNILNCSPSRLSKKLKI
GKKYFQRCQTRPMGEEDFAKHREAQKRLSDLEEMFLAARAKPTAESPTPN
SSANASRSNGGSASSVTPTPSTRSLRTPGIGTPIVRRRTCPPAPSARYAS
CWSPSPLTSRSWR*
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