prot_A-nodosum_M_contig126.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig126.2.1
Unique Nameprot_A-nodosum_M_contig126.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length981
Homology
BLAST of mRNA_A-nodosum_M_contig126.2.1 vs. uniprot
Match: D8LIF5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF5_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 5.000e-29
Identity = 176/535 (32.90%), Postives = 225/535 (42.06%), Query Frame = 0
Query:   25 KIRSQATELADLTERLQRHEAYSRLVETRLLELDPSHSLPVTPRDL------------DSGTSGGRNRS----KRSSSVHEQVDAYSRRGARGGETDESMREGYHAAQERLKDAAQLIRQLREALASR---------------------------------DAEAKAAVERARKLHREVSDLRRR----SGNC----RCGGGAASEGCGDPIMEATGGSPDY----------------------LRREAPRLKRELQEQQKACTAAKAEGAKLKAALELRCRDLGLGQ--------------GGAGVAAELAAARSNINNLRAEVARLRLKPSSAGPTSGGSSGARQARGNIRQSN-------NTCIERSKSTGYR--------DAYTDWGKMGPRTRFEGQGK-----EYDSGAGAAVAALGAEKEALLDYVQDLLDKIKDLETVLSSKGAEHTETLQELESLKEDLRRADLTIANERRDLEQNERDIQEVREKMSQMQEDGVAQRSEKDEMARLYDELLRQLKSAEEEKEQLQ 446
            KIR+QA ELA LTERLQ   AYSRLVE RL+ELDP HSLPVTP  L             SG+ GG  R     K     +E+ D            D+ +R+GY AAQ RL+DAAQLIR LREAL SR                                 DA+A AA  RARK  RE  DLRRR     GN     + G G    G         GG   +                      L ++  RL+++L+EQ++A TAA+ E   L   L+   +   +G                 A +A +LA A         E   LRL+    G                  S+       +T I  S S G+           +T      P    E  G      E + GA      L AEKEALLDYVQDLL +IK LE   +S   E  ++   LE                R+DL+Q E+ I ++ +    +Q+        K+EM RLY+ELL+QLK+AEEEKE+LQ
Sbjct:    5 KIRNQAKELAALTERLQEEAAYSRLVEKRLVELDPEHSLPVTPHHLGRRSPESTIAHRSSGSVGGLGRGYHLQKADQLSNEEHDH-----------DDGLRQGYEAAQARLRDAAQLIRTLREALESRGEFRGDSHVAARAQPDAIAGVFGTTGLPWMPTWDADANAAANRARKYQREADDLRRRLETSGGNVSRASKGGSGGGRVGENQTSSSPLGGEQGHGRELGIRFVDDDRARQHQQHVELSKDVERLEQKLREQREATTAARTEANGLHETLKQLQQSHHVGNLSSQREGAADDAKANAAELARQLARAXXXXXXXXXENKNLRLQLRELGGXXXXXXXXXXXXXXXXSSHISKTMPRSTSIASSSSGGHAIVAAAALGGRHTPAAGSKPALACELGGTRAANVEEEGGADRGGNELEAEKEALLDYVQDLLGRIKGLEAACASLERERGDSSINLEKT--------------RKDLQQKEKAIAQIED----LQKTXXXXXXXKEEMGRLYNELLKQLKTAEEEKEKLQ 510          
BLAST of mRNA_A-nodosum_M_contig126.2.1 vs. uniprot
Match: D8LIF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF6_ECTSI)

HSP 1 Score: 76.3 bits (186), Expect = 2.390e-11
Identity = 55/152 (36.18%), Postives = 82/152 (53.95%), Query Frame = 0
Query:  568 QKEKRGIEEDLVGEKARTLHLVGAIKDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKRVVCLQSGEEVKGFQRQVEEAFGLAEKQDELLENASARMVQLKDESRDLRENLHRAEGAARDARNILQPAVAVARSRLRL 719
            ++E+R  +  L   ++RT HL GA+++                           XXX            L+K VV L+SGEEV+G +R+  EAF LAE+QD+LLE+ SAR+  LK ES+ L+E L +   ++  A+NIL+P +  ARS+L L
Sbjct:   19 REERRERDASLAEGQSRTQHLAGALRELELESAALNSREREAVSRAEGLEQELHXXXSKVSELSLRCEELQKHVVVLKSGEEVQGSRRKAAEAFALAERQDQLLEDTSARLGHLKAESKLLQEELAKTRKSSETAKNILEPVLQGARSQLGL 170          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig126.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIF5_ECTSI5.000e-2932.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LIF6_ECTSI2.390e-1136.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..413
NoneNo IPR availableCOILSCoilCoilcoord: 547..584
NoneNo IPR availableCOILSCoilCoilcoord: 519..543
NoneNo IPR availableCOILSCoilCoilcoord: 242..262
NoneNo IPR availableCOILSCoilCoilcoord: 620..640
NoneNo IPR availableCOILSCoilCoilcoord: 194..214
NoneNo IPR availableCOILSCoilCoilcoord: 19..39
NoneNo IPR availableCOILSCoilCoilcoord: 140..160
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availableCOILSCoilCoilcoord: 421..458
NoneNo IPR availableCOILSCoilCoilcoord: 664..705
NoneNo IPR availableCOILSCoilCoilcoord: 463..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..291
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 912..941
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 60..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..291
NoneNo IPR availablePANTHERPTHR34491A-TYPE INCLUSION PROTEIN, PUTATIVE-RELATEDcoord: 57..702

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig126contigA-nodosum_M_contig126:21979..84093 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig126.2.1mRNA_A-nodosum_M_contig126.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig126 21710..85053 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig126.2.1 ID=prot_A-nodosum_M_contig126.2.1|Name=mRNA_A-nodosum_M_contig126.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=981bp
MVIHVDGVRGKGDRSGDLCDRMSKKIRSQATELADLTERLQRHEAYSRLV
ETRLLELDPSHSLPVTPRDLDSGTSGGRNRSKRSSSVHEQVDAYSRRGAR
GGETDESMREGYHAAQERLKDAAQLIRQLREALASRDAEAKAAVERARKL
HREVSDLRRRSGNCRCGGGAASEGCGDPIMEATGGSPDYLRREAPRLKRE
LQEQQKACTAAKAEGAKLKAALELRCRDLGLGQGGAGVAAELAAARSNIN
NLRAEVARLRLKPSSAGPTSGGSSGARQARGNIRQSNNTCIERSKSTGYR
DAYTDWGKMGPRTRFEGQGKEYDSGAGAAVAALGAEKEALLDYVQDLLDK
IKDLETVLSSKGAEHTETLQELESLKEDLRRADLTIANERRDLEQNERDI
QEVREKMSQMQEDGVAQRSEKDEMARLYDELLRQLKSAEEEKEQLQTKAR
QAARREENEVETARSLREQLDQCSRRLAEANSAAAERVRCLDEEVLAGKN
ALALANSRLAKLDGFETEVIKQAKELKASRDELQALKDAASTSALRLAKL
ETLEADAEAAREELKRCQKEKRGIEEDLVGEKARTLHLVGAIKDLEVKTE
AKRSREKAAASRVEGLQEDLQHRELKVQELTLLCEELEKRVVCLQSGEEV
KGFQRQVEEAFGLAEKQDELLENASARMVQLKDESRDLRENLHRAEGAAR
DARNILQPAVAVARSRLRLGCIQCVGDLDHDHGYNNNRGQRHGAAPHDYH
WDADTAECEEPGSSKAPSLEGLAREAAEALTQLLADKRGVVSGYGRAPLD
DEAGSPLLDTSKLVTSSPRAKDAETVVRGRGYDGDSFGEKAVELETPAVA
PEATLNRAANPWMLRSSSASETDSRVGGCWGNNKSRGRAGNGVRMPDQVS
VRRMEVIRRGSGSESGGVGGVKSRRRGYLGQGQRSRPSAKEGLRCWTTFS
LGGQSPSTVKIRKRIHQAQAALRSIQSTTD*
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