prot_A-nodosum_M_contig125.27.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig125.27.1
Unique Nameprot_A-nodosum_M_contig125.27.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length99
Homology
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BLAST of mRNA_A-nodosum_M_contig125.27.1 vs. uniprot
Match: D7FHY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY2_ECTSI)

HSP 1 Score: 79.7 bits (195), Expect = 2.070e-15
Identity = 43/99 (43.43%), Postives = 54/99 (54.55%), Query Frame = 0 
Query:    1 RNNAEIGGGLAVTGGEVTFQKAVKFDSNQADETGGAFAVFDEGTVAFKKPEVVRYENNFIYDNPFRDQAVTGCSLAYVE-EEATLIGFDVTDVCMEVTV 98
            RN AE GGG+AVTG                        V  +G+V F+KPEVVR  +N +  N +    +TGCSLAYVE  E T++GFD  D+C EVTV
Sbjct:  298 RNTAEYGGGIAVTGXXXXXXXXXXXXXXXXXXXXXXXXVTGDGSVTFEKPEVVRISDNTLLANEYNPDPITGCSLAYVEGNETTVVGFDFDDICQEVTV 396
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig125.27.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FHY2_ECTSI2.070e-1543.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig125contigA-nodosum_M_contig125:344467..354367 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig125.27.1mRNA_A-nodosum_M_contig125.27.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig125 344462..354367 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig125.27.1 ID=prot_A-nodosum_M_contig125.27.1|Name=mRNA_A-nodosum_M_contig125.27.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=99bp
RNNAEIGGGLAVTGGEVTFQKAVKFDSNQADETGGAFAVFDEGTVAFKKP
EVVRYENNFIYDNPFRDQAVTGCSLAYVEEEATLIGFDVTDVCMEVTV*
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