prot_A-nodosum_M_contig1243.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1243.18.1
Unique Nameprot_A-nodosum_M_contig1243.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length323
Homology
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: D8LDI8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDI8_ECTSI)

HSP 1 Score: 233 bits (595), Expect = 6.530e-72
Identity = 135/190 (71.05%), Postives = 145/190 (76.32%), Query Frame = 0
Query:   12 VTTEAFV-PSSFAGSALTMRRGARSS---LTMAEENPALATFDSLEKEVATA--GGGFWFGSAGFWGEEDYRGFVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIVVSVVKALKGAGLLKLGSDGATPALAT 195
            V  EAFV PS FAGSAL+    + SS   + MAE N AL  FD LE+ VA A  GGGFWFGS+GFWGEEDYRGFVD YK DNLINGVYPI+DRVR TKILTTTSESGLLS LEDAGLTLSEAEK          L F ADNLDVLINLFGF+A+EPAK+AIP VVSVVKALKGAGLLKLG   A P  A+
Sbjct:    3 VAAEAFVTPSGFAGSALSRVSSSSSSSSTIRMAESNAALEAFDELEQSVAPAPPGGGFWFGSSGFWGEEDYRGFVDGYKADNLINGVYPIIDRVRATKILTTTSESGLLSELEDAGLTLSEAEKXXXXXXXXXXLSFAADNLDVLINLFGFIAIEPAKLAIPAVVSVVKALKGAGLLKLGGGDAAPVAAS 192          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A835YZH4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZH4_9STRA)

HSP 1 Score: 138 bits (347), Expect = 5.300e-35
Identity = 73/113 (64.60%), Postives = 89/113 (78.76%), Query Frame = 0
Query:   70 FWGEEDYRGFVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIVVSVVKALKGAGLL 182
            FWGEE YR +V +YK D L+N VYP++DRVR+ K+LT T+E GLL ALEDAGLTLS+AE LLPA+EE GLL F A+N D L+N   FLAVEPA++A+P+VV VVK   G GLL
Sbjct:   52 FWGEEGYRTYVATYKGDALVNRVYPVLDRVREKKLLTKTAELGLLGALEDAGLTLSQAEALLPAVEEAGLLSFAANNADFLLNTAAFLAVEPAELALPLVVGVVKG--GPGLL 162          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A7S2YSW8_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YSW8_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.920e-15
Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 0
Query:   72 GEEDYRGFVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIV 169
            GE +Y+ +++  K DN++N  Y ++ RVR+  +L  T+E G+LS LE  GL L+  EKLLP LEE GLL  + +N  +L+NL   L VE A I +P+V
Sbjct:   52 GEGEYKEWINGVKEDNMLNRQYNVIRRVRELDLLKATAEQGILSKLEAQGLDLATVEKLLPLLEELGLLSLVGNNQQLLVNLVAPLVVEGAPILLPVV 149          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A1Z5KCR5_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KCR5_FISSO)

HSP 1 Score: 80.5 bits (197), Expect = 3.450e-14
Identity = 47/120 (39.17%), Postives = 70/120 (58.33%), Query Frame = 0
Query:   72 GEEDYRGFVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIVVSVVKA----LKGAGLLKLGSD 187
            GE +Y+ +V+    ++++N  Y ++ RVR+  +L  T+++GLLS LE+ GL L   EKLLP +EE GLL+    N  +L+NL   L VEPA   IP++   + A      GA    LG D
Sbjct:   53 GEANYKQWVNKISDNSMLNRKYNVIRRVRELDLLKATADNGLLSKLEEQGLDLVTIEKLLPLIEELGLLELAGSNQQLLVNLAAPLLVEPAPFLIPLLAGAIAAGPVAFYGASAAALGLD 172          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A7S3NM98_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NM98_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 2.760e-13
Identity = 43/98 (43.88%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   79 FVDSYKPD-NLINGV-YPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIVVSVVK 174
            F+ SYKP   L+ G  YP++  +++ ++L+ T ++ LL+ LED GL+LS+ EK+LPA+E+ GLL   + NL + I L G+L VEPA   IPI+ +++K
Sbjct:   64 FIKSYKPTATLLEGKPYPLLQEIQNKRLLSATCKADLLTTLEDLGLSLSDIEKILPAIEKAGLLSSASKNLPLAIILTGYLLVEPAPFLIPILGNLLK 161          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: F0YQP1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YQP1_AURAN)

HSP 1 Score: 79.3 bits (194), Expect = 9.560e-13
Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 0
Query:   79 FVDSYKPD-NLINGV-YPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPI 168
            +V SYKP   +I G  YP+   ++D KIL+ T+ESGLL AL+D GLTLS+ EKLLP +++ G L    +NL + I   G+L +EPA + IP+
Sbjct:   60 WVRSYKPTATVIEGKPYPLFQELQDKKILSATAESGLLGALDDLGLTLSDVEKLLPIVDKSGALGLAKNNLPLAIVATGYLLIEPAPVLIPV 151          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A7S2FGP7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FGP7_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.150e-9
Identity = 56/165 (33.94%), Postives = 86/165 (52.12%), Query Frame = 0
Query:    1 MKRAMVFMASVVTTEAFVPSSFAGSALTMRRGARSSLTMAEENPALATF--DSLEKEVATAGGGFWFGSAGFWGEEDYRG-FVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPA 162
            MK   V +A   T+ +   SSF G+   MR      + +   N  + TF  +  E   A A G      +   GE   +  F+   +P +L+   YPI++RV +  +LT T+E+G+LSALE+ GLTL + E LLP +E+ G+L  + +   +L NL   L +EPA
Sbjct:    1 MKLTAVIVALCATSASAYTSSFMGTQSAMR------VNVGRSNLRMETFGFEFAEDAAAVALGE----DSKLLGERRLKEQFIPEQQPRSLLTDDYPILERVGELSLLTRTAEAGILSALEEKGLTLGQLEALLPVIEKLGVLKLVQNP--ILYNLVLPLLIEPA 153          
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Match: A0A7S2BDW8_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BDW8_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 5.010e-9
Identity = 58/178 (32.58%), Postives = 92/178 (51.69%), Query Frame = 0
Query:    1 MKRAMVFMASVVTTEAFVPSSFAGSALTMRRGARSSLTMAEENPALATF--DSLEKEVATAGGGFWFGSAGFWGEEDYRG-FVDSYKPDNLINGVYPIVDRVRDTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVLINLFGFLAVEPAKIAIPIVVSVVKA 175
            MK   V +A   T+ +   SSF G+   MR      + +   N  + TF  +  E   A A G      +   GE   +  F+   +P +L+   YPI++RV +  +LT T+E+G+LSALE+ GLTL + E LLP +E+ G+L  + +   +L NL   L +EPA + +  +   +KA
Sbjct:    1 MKLTAVIVALCATSASAYTSSFMGTQSAMR------VNVGRSNLRMETFGFEFAEDAAAVALGE----DSKLLGERRLKEQFIPEQQPRSLLTDDYPILERVGELSLLTRTAEAGILSALEEKGLTLGQLEALLPVIEKLGVLKLVQNP--ILYNLVLPLLIEPAPLLLGPLSGAIKA 166          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1243.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D8LDI8_ECTSI6.530e-7271.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YZH4_9STRA5.300e-3564.60Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2YSW8_9STRA1.920e-1544.90Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1Z5KCR5_FISSO3.450e-1439.17Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S3NM98_9STRA2.760e-1343.88Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
F0YQP1_AURAN9.560e-1347.83Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2FGP7_9STRA1.150e-933.94Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2BDW8_9STRA5.010e-932.58Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009500Protein of unknown function DUF1118PFAMPF06549DUF1118coord: 98..146
e-value: 1.0E-4
score: 22.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..322
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 283..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1243contigA-nodosum_M_contig1243:148885..155642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1243.18.1mRNA_A-nodosum_M_contig1243.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1243 148382..155997 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1243.18.1 ID=prot_A-nodosum_M_contig1243.18.1|Name=mRNA_A-nodosum_M_contig1243.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=323bp
MKRAMVFMASVVTTEAFVPSSFAGSALTMRRGARSSLTMAEENPALATFD
SLEKEVATAGGGFWFGSAGFWGEEDYRGFVDSYKPDNLINGVYPIVDRVR
DTKILTTTSESGLLSALEDAGLTLSEAEKLLPALEEGGLLDFLADNLDVL
INLFGFLAVEPAKIAIPIVVSVVKALKGAGLLKLGSDGATPALATASVSA
PAAPFSAGDLKAITSKAASKAKAAADRPRSAAAAIPKAAANIPKVAASKS
KVAASKSKAAASKVKVAAVSKVKVATAKVKDAAESIPEPKKPAPVKKLEK
LAPRKRAVSAPKGNISNIPKAL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009500DUF1118