prot_A-nodosum_M_contig1242.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1242.3.1
Unique Nameprot_A-nodosum_M_contig1242.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length106
Homology
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: D7G4K4_ECTSI (Spondin domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D7G4K4_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.180e-34
Identity = 65/87 (74.71%), Postives = 75/87 (86.21%), Query Frame = 0
Query:    1 MFKLTAALVLSTVALSAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICG 87
            M K TA   L++V   A  T+++VRVRNLTY+QPFSP+LVVAHT+DVALF+EGLPASDAIKLMAEDGDNSALLEL  S+DVAPYICG
Sbjct:    1 MVKFTAGFALASVLSLAHATDFKVRVRNLTYLQPFSPMLVVAHTNDVALFKEGLPASDAIKLMAEDGDNSALLELAASDDVAPYICG 87          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: D7FIE5_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIE5_ECTSI)

HSP 1 Score: 117 bits (294), Expect = 7.810e-31
Identity = 56/67 (83.58%), Postives = 63/67 (94.03%), Query Frame = 0
Query:   22 YRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICGV 88
            ++VRVRNLTY+QPFSP L+VAHT DVALF+EG PA+DAIKLMAEDGDNSALLEL ES+DVAPYICGV
Sbjct:   29 FKVRVRNLTYLQPFSPPLIVAHTKDVALFKEGFPANDAIKLMAEDGDNSALLELSESSDVAPYICGV 95          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: D7G4K3_ECTSI (Spondin domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4K3_ECTSI)

HSP 1 Score: 109 bits (272), Expect = 9.630e-28
Identity = 50/67 (74.63%), Postives = 60/67 (89.55%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICG 87
            E  VRVRNLTY+QPFSP+ VVAHT+DV++F+EG PASDA+K+MAEDGDNSAL+EL+ S DV PYICG
Sbjct:    6 EVYVRVRNLTYLQPFSPMFVVAHTNDVSIFREGFPASDAVKIMAEDGDNSALVELLASEDVEPYICG 72          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A2T3P0F7_9GAMM (Spondin domain-containing protein n=2 Tax=Photobacterium sanctipauli TaxID=1342794 RepID=A0A2T3P0F7_9GAMM)

HSP 1 Score: 64.3 bits (155), Expect = 3.460e-10
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALL 73
             Y V VRNLT  QP SP+ V+AH +D  +F+ G PAS+A++LMAE GDNS LL
Sbjct:   36 SYTVEVRNLTSNQPLSPLAVLAHDADYQMFEIGQPASNALELMAESGDNSELL 88          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A090IE62_9GAMM (Putative lipoprotein n=2 Tax=Moritella viscosa TaxID=80854 RepID=A0A090IE62_9GAMM)

HSP 1 Score: 63.5 bits (153), Expect = 7.100e-10
Identity = 37/75 (49.33%), Postives = 47/75 (62.67%), Query Frame = 0
Query:   18 AVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICGVSPLA 92
            AV EY V V N T  QPFSP+LV  H SD++L+  G  AS A++ MAE G N+ LL L +  DVA  + G S +A
Sbjct:   37 AVLEYEVIVYNDTAEQPFSPILVALHNSDISLWSVGSDASSALENMAEGGSNTELLALFKGYDVA--VSGSSAIA 109          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: UPI001C473156 (spondin domain-containing protein n=1 Tax=Enterovibrio sp. NIFS-20-8 TaxID=2853805 RepID=UPI001C473156)

HSP 1 Score: 59.3 bits (142), Expect = 2.260e-8
Identity = 30/67 (44.78%), Postives = 41/67 (61.19%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICG 87
            EY V V NLT  QP SPV ++ H+    LF  G P S A++L+AE GDNSA+L+  +  +V   + G
Sbjct:   22 EYTVTVENLTDAQPMSPVALLTHSDADLLFTVGTPVSQAVELLAEGGDNSAVLKYGKQRNVEEALSG 88          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A2T3MWM1_9GAMM (Spondin domain-containing protein n=3 Tax=Photobacterium TaxID=657 RepID=A0A2T3MWM1_9GAMM)

HSP 1 Score: 58.9 bits (141), Expect = 3.610e-8
Identity = 27/52 (51.92%), Postives = 37/52 (71.15%), Query Frame = 0
Query:   22 YRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALL 73
            + V V+N    QP SP+ V+ H+SD  LF  G PAS+A++++AE GDNSALL
Sbjct:   38 FNVEVKNTAANQPLSPLAVIGHSSDYQLFTIGQPASEALEMLAESGDNSALL 89          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A3A3EED9_9GAMM (Spondin domain-containing protein n=8 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A3A3EED9_9GAMM)

HSP 1 Score: 58.9 bits (141), Expect = 3.880e-8
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALL 73
            ++ V V NLT  QPFSP+ V+AHT D  L++ G PAS+A+++MAE GDNS LL
Sbjct:   48 QFMVEVVNLTAAQPFSPIAVIAHT-DGMLWEIGEPASEALEIMAEGGDNSELL 99          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A1I0AI18_THASX (Uncharacterized protein n=1 Tax=Thalassotalea agarivorans TaxID=349064 RepID=A0A1I0AI18_THASX)

HSP 1 Score: 57.8 bits (138), Expect = 9.730e-8
Identity = 31/57 (54.39%), Postives = 40/57 (70.18%), Query Frame = 0
Query:   19 VTEYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALLEL 75
            VT Y V V NLT  QP SP+ +V H S+  L+Q G PAS+A++L+AE GDNS +L L
Sbjct:   39 VTSYEVSVTNLTNAQPLSPIALVLH-SEGNLWQVGEPASEALELLAESGDNSEVLAL 94          
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Match: A0A0P7DRZ5_9GAMM (Uncharacterized protein n=13 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A0P7DRZ5_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 1.850e-7
Identity = 30/53 (56.60%), Postives = 38/53 (71.70%), Query Frame = 0
Query:   21 EYRVRVRNLTYMQPFSPVLVVAHTSDVALFQEGLPASDAIKLMAEDGDNSALL 73
            E+ V+V NLT  QP SP+  +AHT  + L+Q G PAS A++LMAE GDNS LL
Sbjct:   40 EFTVQVTNLTNAQPLSPIAAIAHTEGM-LWQIGEPASAALELMAEGGDNSELL 91          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1242.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G4K4_ECTSI1.180e-3474.71Spondin domain-containing protein n=3 Tax=Ectocarp... [more]
D7FIE5_ECTSI7.810e-3183.58Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
D7G4K3_ECTSI9.630e-2874.63Spondin domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2T3P0F7_9GAMM3.460e-1058.49Spondin domain-containing protein n=2 Tax=Photobac... [more]
A0A090IE62_9GAMM7.100e-1049.33Putative lipoprotein n=2 Tax=Moritella viscosa Tax... [more]
UPI001C4731562.260e-844.78spondin domain-containing protein n=1 Tax=Enterovi... [more]
A0A2T3MWM1_9GAMM3.610e-851.92Spondin domain-containing protein n=3 Tax=Photobac... [more]
A0A3A3EED9_9GAMM3.880e-856.60Spondin domain-containing protein n=8 Tax=Pseudoal... [more]
A0A1I0AI18_THASX9.730e-854.39Uncharacterized protein n=1 Tax=Thalassotalea agar... [more]
A0A0P7DRZ5_9GAMM1.850e-756.60Uncharacterized protein n=13 Tax=Pseudoalteromonas... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038678Spondin, N-terminal domain superfamilyGENE3D2.60.40.2130coord: 14..95
e-value: 3.7E-11
score: 45.1
IPR009465Spondin, N-terminalPFAMPF06468Spond_Ncoord: 33..79
e-value: 3.7E-5
score: 23.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1242contigA-nodosum_M_contig1242:29212..33527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1242.3.1mRNA_A-nodosum_M_contig1242.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1242 29212..42836 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1242.3.1 ID=prot_A-nodosum_M_contig1242.3.1|Name=mRNA_A-nodosum_M_contig1242.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=106bp
MFKLTAALVLSTVALSAAVTEYRVRVRNLTYMQPFSPVLVVAHTSDVALF
QEGLPASDAIKLMAEDGDNSALLELVESNDVAPYICGVSPLARHPYSRLR
LQGFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038678Spondin_N_sf
IPR009465Spondin_N