prot_A-nodosum_M_contig1237.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1237.2.1
Unique Nameprot_A-nodosum_M_contig1237.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length169
Homology
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5KND2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KND2_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 5.280e-37
Identity = 69/117 (58.97%), Postives = 88/117 (75.21%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCTRQDMLKKMRAVAVVMMIVT---STIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYASES 114
            M DRRKRGA      S RPR R RP   QD+L K++A+A ++++VT   ST+ Q   PK RQ IHEPRRL W+EH  D+RRR LFRRMYRM+EH+F+KLA+LLRPILERN++YA ++
Sbjct:    1 MGDRRKRGAPTESSGSLRPRARARPTHTQDVLNKLKAIAAIVLVVTVATSTVIQRLAPKARQPIHEPRRLDWDEHLEDVRRRKLFRRMYRMEEHSFNKLADLLRPILERNDFYARDA 117          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JDE6_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE6_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 3.690e-33
Identity = 73/114 (64.04%), Postives = 83/114 (72.81%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCTRQDMLKKMRAVAVVMM---IVTSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRRKRGA      SPRPR R RP     +LKK+ AV   ++   +VTST+ Q   PK RQ IHEPRRL WEEH  D+RRR LFRRMYRM+EH+FDKLAELLRPILERN+Y A
Sbjct:    1 MADRRKRGAPTDSSGSPRPRARARPA-HTHVLKKLNAVVATVLLLTVVTSTVTQRFAPKARQPIHEPRRLDWEEHVKDVRRRKLFRRMYRMEEHSFDKLAELLRPILERNDYSA 113          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JHK3_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHK3_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 9.340e-31
Identity = 73/147 (49.66%), Postives = 96/147 (65.31%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCTRQDMLKKMRAVAVVMMI---VTSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYASESQ------VEIRESVAGCVLVNLRALSVYIL 138
            MADRR+RG        PRP  R R     D+L+KM+AVA ++++   VT+T+ Q   PK R  IHEPRRL WEEH  D++RRG+FRRMYRM+EH+F+KLAELLRP LE N++YA +        V+IR +VA  +L     L V +L
Sbjct:    1 MADRRERGVPADSARCPRPPARARHTNNADVLRKMKAVAAIVLVLTVVTTTVVQSFAPKARLPIHEPRRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAELLRPFLESNDFYARKRTRSGAVPVKIRLAVALRMLAGASYLDVAVL 147          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JMM2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMM2_9PHAE)

HSP 1 Score: 119 bits (298), Expect = 2.960e-30
Identity = 62/114 (54.39%), Postives = 81/114 (71.05%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCTRQDMLKKMRAVAVVMMI---VTSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRR+RG        PRP  R R     D+L+KM+AVA ++++   VT+T+ Q    K R  IHEPRRL WEEH  D++RRG+FRRMYRM+EH+F+KLA+LLRP LE N++YA
Sbjct:    1 MADRRERGVPADSARCPRPPARARHTNNADVLRKMKAVAAIVLVLTVVTTTVVQSFATKARLPIHEPRRLDWEEHVRDIKRRGVFRRMYRMEEHSFNKLAQLLRPFLESNDFYA 114          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5KXW2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXW2_9PHAE)

HSP 1 Score: 114 bits (285), Expect = 6.270e-29
Identity = 64/119 (53.78%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRF-RPCTRQDMLKKMRAVAVVMMIV-------TSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRRKRGA +G   +  P QRF R   RQ+++++M+A A V+++V       TS     S  K R +IHEPRRLVWE+H  DL++R LFRRMYRM+E  F+KLA LL PIL+RN+YYA
Sbjct:    1 MADRRKRGAPLGSSCAGPPGQRFMRASGRQELVRQMKAAAAVVILVLSXXXXXTSVAVHASANKTRAAIHEPRRLVWEDHAADLKKRKLFRRMYRMEEPVFNKLAGLLEPILQRNDYYA 119          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5KEZ6_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ6_9PHAE)

HSP 1 Score: 107 bits (267), Expect = 5.920e-25
Identity = 62/119 (52.10%), Postives = 79/119 (66.39%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCT-RQDMLKKMRAVAVVMMI-------VTSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRRKRGA +G   +  P QRFR  + RQ+++++M+A A            VTS     S  K R +IHEPRRLVWE+H  DL++R LFRRMYRM+E  F+KLA LL PIL+RN+Y A
Sbjct:    1 MADRRKRGAPLGSSCAGPPSQRFRRASGRQELVRQMKAAAAXXXXXXXXXXXVTSVAVHASANKTRAAIHEPRRLVWEDHAADLKKRKLFRRMYRMEEPVFNKLAGLLEPILQRNDYDA 119          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JXA4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXA4_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 4.700e-24
Identity = 63/119 (52.94%), Postives = 83/119 (69.75%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCT-RQDMLKKMRAVAVVMMIV-------TSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRRKR AL    + P P QRFR  + RQ+++++M+A A V+++V       TS     S  K R +IHEPRRLVWE+H  DL++R LFRRMYR++E  F+KLA LL PIL+RN+YYA
Sbjct:    1 MADRRKR-ALGSSCAGP-PSQRFRRASGRQELVRQMKAAAAVVVLVLXXXXXXTSVAVHASANKTRAAIHEPRRLVWEDHAADLKKRKLFRRMYRIEEPVFNKLAGLLEPILQRNDYYA 117          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 5.580e-24
Identity = 60/119 (50.42%), Postives = 81/119 (68.07%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCT-RQDMLKKMRAVAVVMMIV-------TSTIAQVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            MADRRKRG+ +G   +  P QRFR  + RQ+++++M+A A V+++V       TS     S  K R +IHEPRRLVWE+H  DL++R L RRMYRM+E  F+KLA LL PIL+  +YYA
Sbjct:    1 MADRRKRGSPLGSSCAGPPSQRFRRASGRQELVRQMKAAAAVVVLVLXXXXXXTSVAVHASANKTRAAIHEPRRLVWEDHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYA 119          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5KS94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS94_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 4.060e-23
Identity = 56/121 (46.28%), Postives = 78/121 (64.46%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFRPCTR-QDMLKKMRAVAVVMMIVTSTIAQV----SGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYASESQV 116
            MADRRK GA +G   +  P QRFR  +  Q+++++++A A            V    S  K R +IHEPRRLVWE+H  DL++R +FRRMYRM+E  F+K+A LL PIL+RN+YYA   ++
Sbjct:    1 MADRRKLGAPLGSSCAGPPSQRFRRASGGQEVVRQLKAAAXXXXXXXXXXXXVTSVASANKTRAAIHEPRRLVWEDHAADLKKRKVFRRMYRMEEPVFNKVAVLLEPILQRNDYYARTERI 121          
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Match: A0A6H5JUE6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUE6_9PHAE)

HSP 1 Score: 94.4 bits (233), Expect = 1.550e-19
Identity = 58/116 (50.00%), Postives = 74/116 (63.79%), Query Frame = 0
Query:    1 MADRRKRGALVGLMSSPRPRQRFR-PCTRQDMLKKMRAVAVVM--MIVTSTIAQVSGPKV--RQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELLRPILERNEYYA 111
            M+ RRKR A     + PRP  R R   T  ++ +K   VA+V    +V +T+     PK   R  +HEPRRL W+EH  DLRRR +FRR YRM+E  FDKLA+LLRPILERN++YA
Sbjct:    1 MSGRRKRPAPAESAACPRPPARLRHTTTTAEVAEKKLLVALVATAFVVAATVFHALNPKAKARLPVHEPRRLDWDEHVRDLRRRKVFRRTYRMEEGCFDKLADLLRPILERNDFYA 116          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1237.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
A0A6H5KND2_9PHAE5.280e-3758.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDE6_9PHAE3.690e-3364.04DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHK3_9PHAE9.340e-3149.66DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JMM2_9PHAE2.960e-3054.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXW2_9PHAE6.270e-2953.78Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEZ6_9PHAE5.920e-2552.10DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JXA4_9PHAE4.700e-2452.94DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JV75_9PHAE5.580e-2450.42DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]
A0A6H5KS94_9PHAE4.060e-2346.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUE6_9PHAE1.550e-1950.00DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1237contigA-nodosum_M_contig1237:62551..63057 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1237.2.1mRNA_A-nodosum_M_contig1237.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1237 61763..63166 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1237.2.1 ID=prot_A-nodosum_M_contig1237.2.1|Name=mRNA_A-nodosum_M_contig1237.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=169bp
MADRRKRGALVGLMSSPRPRQRFRPCTRQDMLKKMRAVAVVMMIVTSTIA
QVSGPKVRQSIHEPRRLVWEEHKVDLRRRGLFRRMYRMDEHTFDKLAELL
RPILERNEYYASESQVEIRESVAGCVLVNLRALSVYILIVLLVSAALRSV
LVTNSLLHWTQLLNMVHS*
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