prot_A-nodosum_M_contig123.57.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig123.57.1
Unique Nameprot_A-nodosum_M_contig123.57.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length260
Homology
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BLAST of mRNA_A-nodosum_M_contig123.57.1 vs. uniprot
Match: D7FQY2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQY2_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.420e-98
Identity = 140/228 (61.40%), Postives = 171/228 (75.00%), Query Frame = 0 
Query:   37 DLEQLLVAAGAAYFPQADTWAKAWSPMRCVVAHIPD-----KWCIS--ALVLPRGGKIEWQRHDKANSISTTIFGNLAVTDLEIQDSGETRKLEQLELEATHADAWAVGGSDESDCVCRGGRCPRMWDCPFWVERRRAEAKGSSAHVALRVPRDASSPHIWRGGPKTVRMLEALEPSALLDIQLGQPKMRYYREIPSTLEDAVELVEVIAPLGVKPGVCRYTGPAIHL 257
            ++E+L+    +  FPQA  W ++W+ MRCVVA   +       CIS   LVLPRG K+EW R+ +A S S  +FGNL++ D E+Q S   RKLEQ ELEAT+AD WAVGGS+ESDCVCRGGRCPRMWDCPFWV+RRRAEAKGSSAHVALR P ++S    WR GP+TVR +EALEPSALL++ +G    RYY+EIPS  EDAVEL+E + PLGVKPGVCRY GP++ L
Sbjct:   32 NVEELMTEVDSDAFPQASVWERSWTSMRCVVADTAETPPSLSTCISMSVLVLPRGTKLEWHRYHEARSFSRQLFGNLSICDAELQGSDNARKLEQQELEATYADGWAVGGSEESDCVCRGGRCPRMWDCPFWVDRRRAEAKGSSAHVALRTPEESSREACWRAGPQTVRRIEALEPSALLEVHVGPRNTRYYKEIPSQTEDAVELIETLTPLGVKPGVCRYLGPSVDL 259
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig123.57.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FQY2_ECTSI2.420e-9861.40Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig123contigA-nodosum_M_contig123:501366..513757 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig123.57.1mRNA_A-nodosum_M_contig123.57.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig123 501297..513981 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig123.57.1 ID=prot_A-nodosum_M_contig123.57.1|Name=mRNA_A-nodosum_M_contig123.57.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=260bp
MLSLSKTCAQLAAVEPGSSYALQDICDKLVDGAGPGDLEQLLVAAGAAYF
PQADTWAKAWSPMRCVVAHIPDKWCISALVLPRGGKIEWQRHDKANSIST
TIFGNLAVTDLEIQDSGETRKLEQLELEATHADAWAVGGSDESDCVCRGG
RCPRMWDCPFWVERRRAEAKGSSAHVALRVPRDASSPHIWRGGPKTVRML
EALEPSALLDIQLGQPKMRYYREIPSTLEDAVELVEVIAPLGVKPGVCRY
TGPAIHLPE*
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