prot_A-nodosum_M_contig1205.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1205.1.1
Unique Nameprot_A-nodosum_M_contig1205.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length118
Homology
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A6H5KI71_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KI71_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 4.800e-38
Identity = 64/117 (54.70%), Postives = 86/117 (73.50%), Query Frame = 0
Query:    1 MMAKPMQLPK---GDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKLPG 114
            MM+ P +LPK    +++  F + V+  +LP LV FHA WC PC M  PV D+IA+EF+ K +VVK+DCD HK +MN+YR RGLP  ++F++G+VIARHEG L YDG VEFL +K+PG
Sbjct:   42 MMSVPFELPKVPQEEAVVAFDDAVVNQELPTLVYFHAKWCGPCIMQGPVFDQIAEEFDGKAKVVKLDCDNHKFLMNKYRVRGLPYTVLFHDGKVIARHEGHLGYDGQVEFL-RKVPG 157          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A6V1RKU1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1RKU1_HETAK)

HSP 1 Score: 106 bits (265), Expect = 4.030e-27
Identity = 51/108 (47.22%), Postives = 74/108 (68.52%), Query Frame = 0
Query:    6 MQLPKGDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEF-EDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            +++P+GD  ++  E       PVLVDF A+WC PC ++AP+MDK+ +EF ED ++VVKVD  VHKD + +Y+  GLP +IIF +GE +A HEG+L Y  + EF+   L
Sbjct:   43 LEVPEGDYEKEVVEA--SKSKPVLVDFWAIWCGPCRLVAPLMDKVQEEFGEDAIKVVKVDTVVHKDTVQRYKLEGLPRLIIFKDGEPVASHEGALPYAKLQEFVKGAL 148          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: M2XHT7_GALSU (Thioredoxin 1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XHT7_GALSU)

HSP 1 Score: 105 bits (262), Expect = 2.080e-26
Identity = 44/97 (45.36%), Postives = 69/97 (71.13%), Query Frame = 0
Query:   17 FKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKLP 113
            F++ VLQ+++PVLVDFHA WC PC ++ P++D +  E+  KL+VVK+D D +   + QY  RGLP +IIF +G ++A  EG+L   G+ ++++K LP
Sbjct:   69 FEQQVLQSQIPVLVDFHADWCGPCKLVTPLLDWLVSEYGGKLKVVKIDTDKNPRYVKQYDVRGLPTLIIFQDGRLVASSEGALGKKGIQQYIEKHLP 165          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A2D7TLG0_9RHOB (Thioredoxin n=1 Tax=Rhodobacteraceae bacterium TaxID=1904441 RepID=A0A2D7TLG0_9RHOB)

HSP 1 Score: 102 bits (254), Expect = 6.070e-26
Identity = 39/98 (39.80%), Postives = 68/98 (69.39%), Query Frame = 0
Query:   15 EKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            E F+  V++++ PVLVD+ A WC PC M+AP++D++A+ + DK+++ KVD D +  +  +Y  RG+P +++F EG++IA H G+L    + +F+D  L
Sbjct:   11 ESFESEVIKSEQPVLVDYWAEWCGPCKMIAPILDEVAESYSDKVKIAKVDVDQNAQISAKYNIRGIPTLMLFREGQIIATHTGALNKTQLTDFIDSNL 108          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A1G0GWY1_9GAMM (Thioredoxin n=1 Tax=Gammaproteobacteria bacterium RIFCSPHIGHO2_12_FULL_40_19 TaxID=1798281 RepID=A0A1G0GWY1_9GAMM)

HSP 1 Score: 101 bits (252), Expect = 1.220e-25
Identity = 46/100 (46.00%), Postives = 72/100 (72.00%), Query Frame = 0
Query:   11 GDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDK 110
            GD+  +F+  VL ++LPVLVDF A WC PC MLAPV+D++AQ+F D++++VKV+ D H++   +Y  RG+P +++F  GE+IA   G+L    +V FL++
Sbjct:    9 GDA--QFQADVLDSELPVLVDFWAPWCGPCRMLAPVLDEVAQQFADRVKIVKVNVDEHQETPAKYGVRGIPSLMLFKGGEMIANKVGALSKSQLVAFLEE 106          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A3B8RMX6_9BURK (Thioredoxin n=1 Tax=Lautropia sp. TaxID=2053568 RepID=A0A3B8RMX6_9BURK)

HSP 1 Score: 100 bits (249), Expect = 3.380e-25
Identity = 42/100 (42.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:   13 SMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            S   F E V++   PVLVDF A WC PC M+AP++D++A++  DKLQV K++ D H ++  +Y  RG+P +I+FN+GE +A+  G++    +V+F+ K +
Sbjct:    7 SASNFDEEVMKASGPVLVDFWAEWCGPCKMIAPILDELAKDMGDKLQVAKLNVDEHGEIAQRYGIRGIPTLILFNQGEQVAQQVGAVSKSQLVQFVQKNI 106          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A7Y4L9R2_9BURK (Thioredoxin n=1 Tax=Pelistega europaea TaxID=106147 RepID=A0A7Y4L9R2_9BURK)

HSP 1 Score: 100 bits (248), Expect = 4.940e-25
Identity = 43/103 (41.75%), Postives = 68/103 (66.02%), Query Frame = 0
Query:   10 KGDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            K  + E F   VLQ   PVLVD+ A WC PC M+AP++D +A EF DK+QVVKVD D + D+  ++  RG+P +++FN+G+ +A   G++    +V+F++  +
Sbjct:    6 KHATTESFDADVLQADKPVLVDYWAPWCGPCKMIAPILDDVASEFADKVQVVKVDVDQNPDIATKFGIRGIPTLMLFNKGQSVATKVGAVNKTQLVQFIESNI 108          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A4Q6CZC8_9GAMM (Thioredoxin n=1 Tax=Moraxellaceae bacterium TaxID=1889775 RepID=A0A4Q6CZC8_9GAMM)

HSP 1 Score: 99.8 bits (247), Expect = 7.200e-25
Identity = 43/96 (44.79%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   17 FKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            F + VL + LPVLVDF A WC PC M+AP++D +A ++E KL++ KVD D +K+V  ++  RG+P +IIF  G+  A   G+L    +VEF++  L
Sbjct:   14 FSQDVLSSDLPVLVDFWAAWCGPCKMIAPILDDLADQYEGKLKIAKVDVDANKEVPGKFGIRGIPTLIIFKNGQAAATKVGALSKAQLVEFINNSL 109          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A3N5JTF4_9BACT (Thioredoxin n=1 Tax=Ignavibacteriae bacterium TaxID=2026749 RepID=A0A3N5JTF4_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 3.900e-24
Identity = 47/109 (43.12%), Postives = 74/109 (67.89%), Query Frame = 0
Query:    4 KPMQLPKGDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            KP++L +G+    F++ VL++  PVLVDF AVWC PC M+AP++D++A E+E KL++ KVD D H+ +  QY  R +P ++IF +G+V+ +  G+     +VE L K L
Sbjct:    2 KPVELSEGN----FEQEVLKSSTPVLVDFWAVWCGPCKMIAPIVDELATEYEGKLKIGKVDVDNHQQIAMQYGIRSIPTLLIFKDGKVVEQLIGAAPKKTLVEKLLKHL 106          
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Match: A0A2E6M3E9_9GAMM (Thioredoxin n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6M3E9_9GAMM)

HSP 1 Score: 97.8 bits (242), Expect = 4.010e-24
Identity = 39/96 (40.62%), Postives = 66/96 (68.75%), Query Frame = 0
Query:   17 FKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKIAQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLEYDGVVEFLDKKL 112
            F  T+ + K+PVLVDF A WC PC MLAP++D+IA+E++ K+Q+ KV+ +   +V  ++  RG+P +++F  GE +A   G+L+   ++ FLD+ +
Sbjct:   13 FDSTIAEAKVPVLVDFWAEWCGPCKMLAPILDQIAEEYDSKIQIAKVNVEESAEVPRKFNVRGIPTLVLFKGGEAVATKVGALDKAQLIAFLDQNI 108          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1205.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KI71_9PHAE4.800e-3854.70Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A6V1RKU1_HETAK4.030e-2747.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
M2XHT7_GALSU2.080e-2645.36Thioredoxin 1 n=1 Tax=Galdieria sulphuraria TaxID=... [more]
A0A2D7TLG0_9RHOB6.070e-2639.80Thioredoxin n=1 Tax=Rhodobacteraceae bacterium Tax... [more]
A0A1G0GWY1_9GAMM1.220e-2546.00Thioredoxin n=1 Tax=Gammaproteobacteria bacterium ... [more]
A0A3B8RMX6_9BURK3.380e-2542.00Thioredoxin n=1 Tax=Lautropia sp. TaxID=2053568 Re... [more]
A0A7Y4L9R2_9BURK4.940e-2541.75Thioredoxin n=1 Tax=Pelistega europaea TaxID=10614... [more]
A0A4Q6CZC8_9GAMM7.200e-2544.79Thioredoxin n=1 Tax=Moraxellaceae bacterium TaxID=... [more]
A0A3N5JTF4_9BACT3.900e-2443.12Thioredoxin n=1 Tax=Ignavibacteriae bacterium TaxI... [more]
A0A2E6M3E9_9GAMM4.010e-2440.63Thioredoxin n=2 Tax=Gammaproteobacteria bacterium ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 14..109
e-value: 3.7E-25
score: 87.9
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 8..113
score: 14.454284
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 4..112
e-value: 7.4E-30
score: 105.0
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 15..111
e-value: 2.4E-27
score: 92.9
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 15..71
e-value: 3.8E-13
score: 46.2
NoneNo IPR availablePANTHERPTHR45663GEO12009P1coord: 15..112
NoneNo IPR availablePANTHERPTHR45663:SF22THIOREDOXIN X, CHLOROPLASTICcoord: 15..112
NoneNo IPR availableCDDcd02947TRX_familycoord: 15..109
e-value: 7.33678E-26
score: 90.6952
IPR005746ThioredoxinPIRSFPIRSF000077Thioredoxincoord: 7..112
e-value: 1.4E-29
score: 100.1
IPR017937Thioredoxin, conserved sitePROSITEPS00194THIOREDOXIN_1coord: 29..47
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 13..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1205contigA-nodosum_M_contig1205:22551..45329 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1205.1.1mRNA_A-nodosum_M_contig1205.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1205 21887..47354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1205.1.1 ID=prot_A-nodosum_M_contig1205.1.1|Name=mRNA_A-nodosum_M_contig1205.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=118bp
MMAKPMQLPKGDSMEKFKETVLQNKLPVLVDFHAVWCAPCFMLAPVMDKI
AQEFEDKLQVVKVDCDVHKDVMNQYRARGLPLMIIFNEGEVIARHEGSLE
YDGVVEFLDKKLPGGLK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR005746Thioredoxin
IPR017937Thioredoxin_CS
IPR036249Thioredoxin-like_sf