prot_A-nodosum_M_contig12004.1.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12004.1.2
Unique Nameprot_A-nodosum_M_contig12004.1.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length254
Homology
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: D7FRJ7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRJ7_ECTSI)

HSP 1 Score: 208 bits (530), Expect = 8.280e-62
Identity = 109/254 (42.91%), Postives = 156/254 (61.42%), Query Frame = 0
Query:    2 DAEFAAIFDDSDALFTAPVFVSDLFVDGKPKVRGFDQVSRWTGDLQRQAIGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYDFRKIKTK-RTTLSFDEPASSANIPTMFIMKHISDDTPAILSKDLYDVLCVGSDFEAGDCSRANRTR--AYSTTAKRCTGHWSVGNRSWNDTLQNHIEGVRHHSSAFVWRSEVQADKAVVG 252
            DA++  I D +DA F +PV  SDLF +GKP +RG + +++W  +  R+A GG   VG FMT  +FP+++K+ H +QMR+ IA NLG+ TFE+AF  IC   ++ YSQF+IM NYLWYY  +EY W IA  +N DF  +  + R   S D    +AN+P +F+MKH+ D     L+ D+Y+ +C+GS+ EAG+C R    +   ++ T K     WSVG+ +W DT ++H   V    SAF WR E   D   VG
Sbjct:  158 DADYMGIID-TDAAFISPVVPSDLFDEGKPILRGMNIITQWQSETSRKATGGFPYVGRFMTRIAFPIIIKSEHFSQMRQVIAENLGAETFEEAFKVICSAGKESYSQFEIMINYLWYYHHDEYSWHIADRDNGDFHGLNLQGRARASDDGSVVAANVPAIFVMKHLDDKDVFTLNDDMYENVCLGSNNEAGNCQRRPPAQNDGHAQTLK-----WSVGSTTWGDTYKDHSRRVSRAGSAFQWRGEEDEDWVHVG 405          
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: A0A6H5K9S0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9S0_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 1.510e-48
Identity = 95/236 (40.25%), Postives = 130/236 (55.08%), Query Frame = 0
Query:   14 ALFTAPVFVSDLFVDG-KPKVRGFDQVSRWTGDLQRQAIGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYDFRKIKTKRTTLSFDEPASSANIPTMFIMKHISDDTPAILSKDLYDVLCVGSDFEAGDCSRANRTRAYSTT-AKRCTGHWSVGNRSWNDTLQNHIEGVRHHSSAFVWRSEVQAD 247
            ++ T  V  SDLF D  KP ++G +  S W  ++ ++AIGG E VG FMTP  FP+++K+ H   MR DI RNLG+ATF +AFH IC    + YSQF+IM  YLWY K +EY W IA   N D + +         D+   + N+P + +MKH    T   +  D YD LC+GS+  AG+C    ++R  S       T  WSVGN++W  T + H   +     AF WR E   D
Sbjct:   13 SVHTHAVVPSDLFDDDRKPFIKGVNCGSPWRSEVTKRAIGGVESVGRFMTPMIFPVIVKSDHFDDMRRDITRNLGAATFAEAFHMICSEGANSYSQFEIMVTYLWYNKHDEYSWHIADPANMDAKSLNIGDKRYYEDDRVVATNVPVIVVMKHSKIRTS--IDSDTYDYLCLGSNNLAGNC----QSRVPSPLDGSAQTVQWSVGNQTWMHTYEEHSTKLSRAGKAFRWRRETAQD 242          
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: A0A3M7T151_BRAPC (Uncharacterized protein n=1 Tax=Brachionus plicatilis TaxID=10195 RepID=A0A3M7T151_BRAPC)

HSP 1 Score: 130 bits (327), Expect = 1.580e-31
Identity = 77/209 (36.84%), Postives = 120/209 (57.42%), Query Frame = 0
Query:    2 DAEFAAIFDDSDALFTAPVFVSDLFVDGKPKVRGFDQV-SRWTGDLQRQAIGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYDFRKIKTKRTTLSFDEPASSANIPTMFIMKHISD--DTPAILSKDLYDVLCVGSDFEAGDCSRANRTRAYSTTAK 207
            D E+ AI D SD+ F A V   DLFVDGKP++ G++   +RW   + ++A+G  + +G FM   +FP+++K +H  Q+R  I + + + TFE+AFH IC   +  YSQFD++ +YLWY+KRNEY W +  V  +   ++  KR T   D    + N P + + KH     + P  + K ++D +CV SD +AG C        ++ T K
Sbjct:  186 DKEYIAIVD-SDSYFVAQVTPEDLFVDGKPRIIGYNGCCTRWLNSI-KEALGV-DPLGEFMNRGNFPIIIKRNHFKQIRMHITKTMATRTFEEAFHSICSKYKGQYSQFDLLVHYLWYFKRNEYSWHLKDVLEFGHYRMP-KRATNDTDVIQMN-NKPMISVAKHAGSLLNYPNYMFKIMFDYMCVASDNQAGSCGSLFGKELFNQTLK 389          
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: A0A3P3YPH4_PLABS (Uncharacterized protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3YPH4_PLABS)

HSP 1 Score: 116 bits (290), Expect = 1.270e-26
Identity = 74/194 (38.14%), Postives = 105/194 (54.12%), Query Frame = 0
Query:    2 DAEFAAIFDDSDALFTAPVFVSDLFVDGKPKVRGFDQV-SRWTGDLQRQAIGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYD-FRKIKTKRTTLSFDEPASSANIPTMFIMKHISDDTPAILSKDLYDVLCVGSDFEAGDC 193
            +A+F   F DSD +F  PV V DLFV GKP+V  ++   + W   ++R AIGG+  V  FMT  SFP ++   H A MR  IAR LG+ATF+ AFH IC    + YSQ+D+M +YLWY  R++Y W       +D F+  ++       D  A+    P + +MK I       L     D +CV +++ A  C
Sbjct:  151 EADFVG-FVDSDTMFITPVAVGDLFVGGKPRVSAYNGCCTGWNSPIER-AIGGKP-VAEFMTSSSFPFIVHRGHFAPMRAHIARTLGAATFDDAFHTICAEYGEQYSQYDLMGHYLWYAHRDDYAWHFRAPRGHDAFQAAQSDDA----DVLAAMQTRPAVSLMKMIGHSDFGSLLTVWSDYVCVAANWTAPGC 337          
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: A0A0G4J7L3_PLABS (Uncharacterized protein (Fragment) n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J7L3_PLABS)

HSP 1 Score: 104 bits (260), Expect = 2.040e-23
Identity = 60/135 (44.44%), Postives = 81/135 (60.00%), Query Frame = 0
Query:    2 DAEFAAIFDDSDALFTAPVFVSDLFVDGKPKVRGFDQV-SRWTGDLQRQAIGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYD 135
            +A+F   F DSD +F  PV V DLFV GKP+V  ++   + W   ++R AIGG+  V  FMT  SFP ++   H A MR  IAR LG+ATF+ AFH IC    +H  Q+D+M +YLWY  R++Y W       +D
Sbjct:   92 EADFVG-FVDSDTMFITPVAVGDLFVGGKPRVSAYNGCCTGWNSPIER-AIGGKP-VAEFMTSSSFPFIVHRGHFAPMRAHIARTLGAATFDDAFHTICAEYGEH--QYDLMGHYLWYAHRDDYAWHFRAPRGHD 221          
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Match: A0A482QXN1_9EURY (Uncharacterized protein n=1 Tax=Methanosarcinales archaeon TaxID=2250255 RepID=A0A482QXN1_9EURY)

HSP 1 Score: 67.8 bits (164), Expect = 2.260e-9
Identity = 49/129 (37.98%), Postives = 69/129 (53.49%), Query Frame = 0
Query:    9 FDDSDALFTAPVFVSDLFVD-GKPKVR---GFDQVSRWTGDLQRQAIG-GREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICHGSEDHYSQFDIMFNYLWYYKRNEYFWTIARVE 132
            F DSD +FT  +   DLF D G+P++    G  Q S W       A+  G+  V   M+   FP+++KT HLA +RE I+  LG   F+  F +  H     YSQF+IM NY WY+ ++EY W +   E
Sbjct:  156 FVDSDTIFTTQIHAGDLFDDVGRPRIIANVGAPQNSFWHDAPAATALALGKPEVLRCMS--YFPVILKTQHLAALREHISSTLGG-DFDTVFQR--HIVTRTYSQFNIMCNYAWYFHKDEYSWHMQERE 279          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12004.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FRJ7_ECTSI8.280e-6242.91Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5K9S0_9PHAE1.510e-4840.25Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3M7T151_BRAPC1.580e-3136.84Uncharacterized protein n=1 Tax=Brachionus plicati... [more]
A0A3P3YPH4_PLABS1.270e-2638.14Uncharacterized protein n=1 Tax=Plasmodiophora bra... [more]
A0A0G4J7L3_PLABS2.040e-2344.44Uncharacterized protein (Fragment) n=1 Tax=Plasmod... [more]
A0A482QXN1_9EURY2.260e-937.98Uncharacterized protein n=1 Tax=Methanosarcinales ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12004contigA-nodosum_M_contig12004:2949..4460 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12004.1.2mRNA_A-nodosum_M_contig12004.1.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12004 2684..4703 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12004.1.2 ID=prot_A-nodosum_M_contig12004.1.2|Name=mRNA_A-nodosum_M_contig12004.1.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=254bp
MDAEFAAIFDDSDALFTAPVFVSDLFVDGKPKVRGFDQVSRWTGDLQRQA
IGGREGVGSFMTPFSFPLVMKTSHLAQMREDIARNLGSATFEQAFHKICH
GSEDHYSQFDIMFNYLWYYKRNEYFWTIARVENYDFRKIKTKRTTLSFDE
PASSANIPTMFIMKHISDDTPAILSKDLYDVLCVGSDFEAGDCSRANRTR
AYSTTAKRCTGHWSVGNRSWNDTLQNHIEGVRHHSSAFVWRSEVQADKAV
VGT*
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