prot_A-nodosum_M_contig12.127.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12.127.2
Unique Nameprot_A-nodosum_M_contig12.127.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length534
Homology
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A6H5L9C1_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9C1_9PHAE)

HSP 1 Score: 171 bits (434), Expect = 2.660e-43
Identity = 89/140 (63.57%), Postives = 109/140 (77.86%), Query Frame = 0
Query:   30 RDQLLSSSLCG--PLNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIADQLRQLYSRREVVIELAFVNDQDAPE 167
            R+ +L  S     PLN+P TP +L R+PP KG +RETLQDIARRVPVE++ PYFN+ LRTAADA+ ISVT+LKRLCRRHGVKRWPHRQLSGLNR V+HLE +Q    + DP IA QL +LY RR+ VI+LAF +D ++ E
Sbjct:   10 RNGVLQQSNASRTPLNLPKTPRKLARQPPLKGTRRETLQDIARRVPVEVLLPYFNFSLRTAADAMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLEERQAT--SNDPDIARQLARLYCRRDEVIDLAFTSDDNSSE 147          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: D7FN15_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN15_ECTSI)

HSP 1 Score: 155 bits (393), Expect = 2.790e-40
Identity = 81/133 (60.90%), Postives = 101/133 (75.94%), Query Frame = 0
Query:   42 LNIPDTPPRLPRRPPQK-GNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIA--DQLRQLYSRREVVIELAFVNDQDAPEPKDG 171
            L IPD PP LP R   K G+KRE L DIA+R+PVE++R YFNYPLR +A+A+ ISVTTLKRLCRRHGVKRWPHRQ+SGLNR +  LEA+ +A    + I A  ++LRQL+ RREV+IE AF +D ++   KDG
Sbjct:   37 LRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRTLGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDESTRNKDG 169          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A6H5K716_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K716_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 6.970e-39
Identity = 78/126 (61.90%), Postives = 100/126 (79.37%), Query Frame = 0
Query:   42 LNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACP--TIDPIIADQLRQLYSRREVVIELAFVNDQDA 165
            L IP  PP++PRR P KGNKRETL DIA+R+PVE++R YFNYPLR AA+A+ ISVTTLKRLCRRHGVKRWPHRQ+ G+NR +  LE + +      +D + A+QLRQL+ RR+V+IELAF +D ++
Sbjct:   88 LTIPHEPPKVPRRTPSKGNKRETLADIAKRIPVELMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSV-AEQLRQLHRRRDVIIELAFESDDES 212          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: D8LEC2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC2_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 7.510e-39
Identity = 79/126 (62.70%), Postives = 99/126 (78.57%), Query Frame = 0
Query:   42 LNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACP--TIDPIIADQLRQLYSRREVVIELAFVNDQDA 165
            L IP  PP++PRR P KGNKRETL DIA+R+PV ++R YFNYPLR AA+A+ ISVTTLKRLCRRHGVKRWPHRQ+ G+NR +  LE + +      +D + ADQLRQLY RR+V+IELAF +D ++
Sbjct:   76 LAIPHEPPKVPRRTPSKGNKRETLADIAKRIPVGLMRHYFNYPLRAAAEAMDISVTTLKRLCRRHGVKRWPHRQICGINRTLNDLETQHDTAKGDEVDSV-ADQLRQLYRRRDVIIELAFESDDES 200          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A6H5JLN8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN8_9PHAE)

HSP 1 Score: 160 bits (404), Expect = 6.040e-38
Identity = 80/125 (64.00%), Postives = 101/125 (80.80%), Query Frame = 0
Query:   42 LNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPII-------ADQLRQLYSRREVVIELAF 159
            L IP+TPP +PRRPP KGNKRETL DIA R+PV ++RPYFNYPLRTAA+A++ISVTTLKRLCRRHGVKRWPHRQ+SG+NRA+AHLE +Q+     +  I       ++Q+++L  RR+V+IE AF
Sbjct:  991 LFIPETPPVVPRRPPSKGNKRETLGDIALRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQDQAGRRNSEITIRNNQVSEQMQELLRRRQVMIEHAF 1115          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A6H5KFL8_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFL8_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 3.780e-37
Identity = 82/134 (61.19%), Postives = 102/134 (76.12%), Query Frame = 0
Query:   40 GPLNIPDTPPRLPRRPPQK-GNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIA--DQLRQLYSRREVVIELAFVNDQDAPEPKD 170
            G L IPD PP LP R   K G+KRE L DIA+R+PVE++R YFNYPLR +A+A+ ISVTTLKRLCRRHGVKRWPHRQ+SGLNRA+  LEA+ +A    + I A  ++LRQL+ RREV+IE AF +D ++   KD
Sbjct:   36 GRLRIPDEPPTLPPRDVSKAGSKREVLADIAKRIPVELMREYFNYPLRVSAEAMHISVTTLKRLCRRHGVKRWPHRQISGLNRALGDLEAQHDAARGEEEIAAVEEELRQLHRRREVIIERAFESDDESTRDKD 169          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: D8LNV2_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV2_ECTSI)

HSP 1 Score: 152 bits (384), Expect = 1.710e-35
Identity = 75/110 (68.18%), Postives = 91/110 (82.73%), Query Frame = 0
Query:   22 DAYKPTDFRDQLLSSSLCGPLNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQE 131
            D  KP  F + +  +S    L IP+TPP +PRRPP KGNKRETL DIA R+PV ++RPYFNYPLRTAA+A++ISVTTLKRLCRRHGVKRWPHRQ+SG+NRA+AHLE +Q+
Sbjct:  747 DVGKP--FCEVVRDASGLTRLFIPETPPVVPRRPPSKGNKRETLGDIAHRIPVTVMRPYFNYPLRTAAEAMNISVTTLKRLCRRHGVKRWPHRQISGINRAMAHLEFQQD 854          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: D8LCC6_ECTSI (Riboflavin kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCC6_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 2.330e-16
Identity = 57/122 (46.72%), Postives = 70/122 (57.38%), Query Frame = 0
Query:   35 SSSLCGPLNIPDTPPRLPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIADQLRQLYSRREVVIE 156
            S++   PLN+P TP +L R+PP K                                A+ ISVT+LKRLCRRHGVKRWPHRQLSGLNR V+HLE +Q    + DP IA QL +LY RR+ VI+
Sbjct:   17 SNASRTPLNLPKTPRKLARQPPLK--------------------------------AMCISVTSLKRLCRRHGVKRWPHRQLSGLNRTVSHLEERQAT--SSDPDIARQLARLYCRRDEVID 104          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A835Z7T4_9STRA (RWP-RK domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7T4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.060e-15
Identity = 43/103 (41.75%), Postives = 70/103 (67.96%), Query Frame = 0
Query:   60 NKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIADQLRQ----LYSRREVVIELA 158
            +KR+T +++A+R+PV ++  +++ PL  AA  LS+S+T LK+LCR++G+KRWPHRQ+S LN+++  LE K       D   A  LR     L ++RE++I+ A
Sbjct:    1 SKRQTSEEVAKRLPVSVLEEFYHVPLNIAARELSVSLTMLKKLCRQYGIKRWPHRQVSSLNKSLGKLEEK--ILGASDDKAAAALRAKAGPLRTKRELIIKTA 101          
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE)

HSP 1 Score: 84.7 bits (208), Expect = 1.950e-13
Identity = 43/101 (42.57%), Postives = 68/101 (67.33%), Query Frame = 0
Query:   61 KRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLKRLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTID---PIIADQLRQLYSRREVVIELA 158
            KR+T +D+A R+P+E++  +++ PL  AA  L++S+T LK+LCR +GVKRWPHRQ+S L++  + LE K +A        P +  +L Q   RR+V+I+ A
Sbjct:  464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKIKARRDGGKDAPSLVRKLTQARKRRKVIIKTA 564          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.127.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L9C1_9PHAE2.660e-4363.57RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D7FN15_ECTSI2.790e-4060.90Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5K716_9PHAE6.970e-3961.90RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LEC2_ECTSI7.510e-3962.70Putative NIN-like transcription factor n=1 Tax=Ect... [more]
A0A6H5JLN8_9PHAE6.040e-3864.00RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5KFL8_9PHAE3.780e-3761.19RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LNV2_ECTSI1.710e-3568.18Putative NIN-like transcription factor n=1 Tax=Ect... [more]
D8LCC6_ECTSI2.330e-1646.72Riboflavin kinase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835Z7T4_9STRA1.060e-1541.75RWP-RK domain-containing protein (Fragment) n=1 Ta... [more]
A0A6H5KE17_9PHAE1.950e-1342.57RWP-RK domain-containing protein n=1 Tax=Ectocarpu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003035RWP-RK domainPFAMPF02042RWP-RKcoord: 74..117
e-value: 3.1E-17
score: 62.3
IPR003035RWP-RK domainPROSITEPS51519RWP_RKcoord: 55..139
score: 17.654749
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..63
IPR044607Transcription factor RKD-likePANTHERPTHR46373PROTEIN RKD4coord: 48..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:1681470..1687320 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.127.2mRNA_A-nodosum_M_contig12.127.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12 1679436..1688052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12.127.2 ID=prot_A-nodosum_M_contig12.127.2|Name=mRNA_A-nodosum_M_contig12.127.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=534bp
MLASDPTVSRRSGGHAGFFVGDAYKPTDFRDQLLSSSLCGPLNIPDTPPR
LPRRPPQKGNKRETLQDIARRVPVEIIRPYFNYPLRTAADALSISVTTLK
RLCRRHGVKRWPHRQLSGLNRAVAHLEAKQEACPTIDPIIADQLRQLYSR
REVVIELAFVNDQDAPEPKDGTSTELTSITGYSLDRVETSMIMSRDQSPE
RTKSTTNQDATIPWWHREPGASSLFRGDGGSTRKERHIDVNGGDYCGESD
GDGLDDGRHTMVSACGRNNDVRSERDLLAQDAPNFRASSVLVRLPGMAPP
PPPASGSPFRPFHSMDMSSMLRSAPSQRAGANAVHPRVVVGRGGDAARRA
VSPVTISYTATRCPPPHGYGAGRPATSHYLPMASPYPNEQITELTALNDI
LFGPEGEDPHLFAAAQARAMAAATAAERDGEDPQLFATAQARAVAAAAAA
VVDREPYYHRPKAATLASLDASHSRAIDAQRYDGYGCDDEGHENGRLPSI
AGLVAAGAFIRNDKWRSFRPPGSLRVREHASEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003035RWP-RK_dom
IPR044607RKD-like