prot_A-nodosum_M_contig12.117.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12.117.1
Unique Nameprot_A-nodosum_M_contig12.117.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length184
Homology
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: A0A6H5JWR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWR3_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.060e-53
Identity = 93/171 (54.39%), Postives = 121/171 (70.76%), Query Frame = 0
Query:   13 SGSSRRSVPQGPHRMYNCCRSKIIRGLFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSVVLLLDGYNVVGLFRGYTSLGVELERDKEGHVQMGEVVL 183
            SGS   +  +   R   C R K +R  FR+ N+    +F +SA +QYNDDDG+ WAA+Y  A VFC+L+ELSWR LRT++  P L +F   + IG+ YVLIA+LL+   EGG   E+  +F+GLLLV+ WMS+VLLLD +NVVG+FRGYTSL  E ERD+EGHVQMGEVV+
Sbjct:   43 SGSHVPTAARPSERCGRCFRRKCVRVTFRLINLGFAAVFLSSAILQYNDDDGIAWAALYFMAAVFCILSELSWRHLRTFLVLPTLWMFTLCSWIGAGYVLIAQLLVGHAEGGASGEDAMDFYGLLLVSFWMSIVLLLDRHNVVGVFRGYTSL-TEHERDREGHVQMGEVVI 212          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: D7FJF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF2_ECTSI)

HSP 1 Score: 136 bits (343), Expect = 2.710e-38
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0
Query:   71 YATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSVVLLLDGYNVVGLFRGYTSLGVELERDKEGHVQMGEVVL 183
            Y  A VFC+L+ELSWR+LRT+   P L +F   + IG+ YVLIA+LL+   EGG   E+  +F+GLLLV+ WMS+VLLLD +NVVG+FRGYTSL  E ERD+EGHVQMGEVV+
Sbjct:    7 YDAAAVFCILSELSWRQLRTFFVLPTLWVFTLCSWIGAAYVLIAQLLVGHAEGGASGEDAMDFYGLLLVSFWMSIVLLLDRHNVVGVFRGYTSL-TEHERDREGHVQMGEVVI 118          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: A0A851EXQ8_PITSO (TM220 protein (Fragment) n=1 Tax=Pitta sordida TaxID=9163 RepID=A0A851EXQ8_PITSO)

HSP 1 Score: 58.2 bits (139), Expect = 7.760e-8
Identity = 34/108 (31.48%), Postives = 58/108 (53.70%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGM-DDEEVYEFWGLLLVTVWMSV 145
            L+R+SNV+    F+ +AAVQ ND D  LW  +Y       +L  ++       ++R L  L     ++G+  + +A  L    +G +  +EE  E +GLL++T+WMS+
Sbjct:    1 LWRISNVLMAAFFSLAAAVQVNDPDAGLWMVVYFVPAALTLLVSINPSITDNGVWRSLCDLHCAGCVVGT--IALACSLFAYAKGNIFHEEEGRELFGLLIITIWMSL 106          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: UPI0003C18C05 (transmembrane protein 220 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=UPI0003C18C05)

HSP 1 Score: 58.2 bits (139), Expect = 2.620e-7
Identity = 42/122 (34.43%), Postives = 61/122 (50.00%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFA-TSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSVVLLLDGYNVVGLFR 159
            L+RV NV+  L F  +A VQ ND D  LW   Y      C+L  ++ +     I++ L  L    STL+  +  L   LL R     + +EE  EF+GLL+V +W+ ++    G N VG  R
Sbjct:   21 LWRVCNVLMGLFFLVAAYVQINDPDAGLWIVAYIIPAALCILISITPQITENLIWKSLSELHVLVSTLVAGW--LGHFLLTRATRAIIHEEEGREFFGLLIVIIWL-LLCRNSGRNTVGSLR 139          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: A0A7K9VDS9_ANSSE (TM220 protein (Fragment) n=2 Tax=Galloanserae TaxID=1549675 RepID=A0A7K9VDS9_ANSSE)

HSP 1 Score: 57.4 bits (137), Expect = 3.610e-7
Identity = 32/108 (29.63%), Postives = 57/108 (52.78%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGG-MDDEEVYEFWGLLLVTVWMSV 145
            L+R+ N++  + F  +AAVQ ND D  LW  +Y       +L  L+        +R L  L +   ++G+  + +A  L    +G  + +EE  E +GL+++T+WMS+
Sbjct:    1 LWRLCNLLMAIFFGLAAAVQVNDPDAGLWVVVYLVPAALTLLVGLNPSVTENVFWRSLCDLHSAGCIVGT--IALAYSLFAYTQGNILHEEEGRELFGLVIITIWMSL 106          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: UPI00074FE513 (transmembrane protein 220 isoform X3 n=3 Tax=Gekko japonicus TaxID=146911 RepID=UPI00074FE513)

HSP 1 Score: 57.0 bits (136), Expect = 6.360e-7
Identity = 33/107 (30.84%), Postives = 56/107 (52.34%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSV 145
            L+R+SN +  + F  + AVQ ND D  LW  +YA      ++  L+      +++R L  L   +  +G   +L   LL    +  + +EE  E +GL+++TVWMS+
Sbjct:   15 LWRLSNFVMAVFFGLAGAVQVNDPDPGLWIVVYAVPAALTLVVSLNPPIADNFVWRSLSDLHLAAC-VGGSAILGYSLLANAQKNILHEEEGRELFGLVIITVWMSL 120          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: A0A6J3E085_AYTFU (transmembrane protein 220 isoform X1 n=10 Tax=Anatidae TaxID=8830 RepID=A0A6J3E085_AYTFU)

HSP 1 Score: 56.6 bits (135), Expect = 8.130e-7
Identity = 33/112 (29.46%), Postives = 59/112 (52.68%), Query Frame = 0
Query:   35 IIRGLFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGG-MDDEEVYEFWGLLLVTVWMSV 145
            + R L+++ N++    F  +AAVQ ND D  LW  IY       +L  L+       ++R L  L +   + G+  + +A  L+   +G  + +EE  E +GL+++T+WMS+
Sbjct:    6 LARRLWQLCNLLMATFFGLAAAVQVNDPDAGLWVVIYLVPAALTLLVGLNPSVTENAVWRSLCDLHSAGCIFGT--IALACSLVEYTQGNILHEEEGRELFGLVIITIWMSL 115          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: A0A8B9CQT0_9AVES (Transmembrane protein 220 n=7 Tax=Anatidae TaxID=8830 RepID=A0A8B9CQT0_9AVES)

HSP 1 Score: 55.8 bits (133), Expect = 1.570e-6
Identity = 32/109 (29.36%), Postives = 54/109 (49.54%), Query Frame = 0
Query:   37 RGLFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSV 145
            R L+++ N++    F  +AAVQ ND D  LW  +Y       +L  LS       ++R L  L +   + G+   L   L +      + +EE  E +GL+++T+WMS+
Sbjct:    8 RRLWQLCNLLMAAFFGLAAAVQVNDPDAGLWVVVYLVPAALTLLVGLSPSVTENAVWRSLCDLHSAGCIFGTI-ALACSLFVYTQGNILHEEEGRELFGLVIITIWMSL 115          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: UPI001E858DAB (transmembrane protein 220 isoform X1 n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI001E858DAB)

HSP 1 Score: 56.2 bits (134), Expect = 1.570e-6
Identity = 33/107 (30.84%), Postives = 58/107 (54.21%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSV 145
            L+R+SN++  + F  +AAVQ ND D  LW   YA      ++  L+       ++R L  + + + ++GS  +L   L     +  + +EE  E +GL++VT+WMS+
Sbjct:   32 LWRLSNLVMTVFFGLAAAVQINDPDPGLWIVAYAVPATLTLVVSLNPPTADNIVWRSLSDVHSAACVVGSA-ILGYSLWSNAQKNILHEEEGRELFGLVIVTIWMSL 137          
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Match: UPI000777A45F (transmembrane protein 220 isoform X1 n=2 Tax=Coturnix japonica TaxID=93934 RepID=UPI000777A45F)

HSP 1 Score: 56.2 bits (134), Expect = 2.910e-6
Identity = 34/108 (31.48%), Postives = 56/108 (51.85%), Query Frame = 0
Query:   39 LFRVSNVIAMLLFAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALFATSTLIGSFYVLIARLLLRKPEGG-MDDEEVYEFWGLLLVTVWMSV 145
            L+R+ N++    F  +AAVQ ND D  LW  +Y       +L  L+      + +R L  L +    IG+  + +A  L    +G  + +EE  E +GL+++TVWMS+
Sbjct:   90 LWRLCNLLMAAFFGLAAAVQVNDPDAGLWVVVYLVPAALTLLVVLNPLVTENFFWRRLCDLHSAGCTIGT--ISLAYSLFAYTQGNILHEEEGRELFGLVIITVWMSL 195          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.117.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5JWR3_9PHAE1.060e-5354.39Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FJF2_ECTSI2.710e-3861.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A851EXQ8_PITSO7.760e-831.48TM220 protein (Fragment) n=1 Tax=Pitta sordida Tax... [more]
UPI0003C18C052.620e-734.43transmembrane protein 220 n=1 Tax=Latimeria chalum... [more]
A0A7K9VDS9_ANSSE3.610e-729.63TM220 protein (Fragment) n=2 Tax=Galloanserae TaxI... [more]
UPI00074FE5136.360e-730.84transmembrane protein 220 isoform X3 n=3 Tax=Gekko... [more]
A0A6J3E085_AYTFU8.130e-729.46transmembrane protein 220 isoform X1 n=10 Tax=Anat... [more]
A0A8B9CQT0_9AVES1.570e-629.36Transmembrane protein 220 n=7 Tax=Anatidae TaxID=8... [more]
UPI001E858DAB1.570e-630.84transmembrane protein 220 isoform X1 n=1 Tax=Sphae... [more]
UPI000777A45F2.910e-631.48transmembrane protein 220 isoform X1 n=2 Tax=Cotur... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029377TMEM220 proteinPFAMPF15071TMEM220coord: 50..146
e-value: 6.5E-14
score: 52.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:1582474..1613462 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.117.1mRNA_A-nodosum_M_contig12.117.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12 1581673..1613616 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12.117.1 ID=prot_A-nodosum_M_contig12.117.1|Name=mRNA_A-nodosum_M_contig12.117.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=184bp
MSDSILDEGGMTSGSSRRSVPQGPHRMYNCCRSKIIRGLFRVSNVIAMLL
FAASAAVQYNDDDGVLWAAIYATAGVFCVLAELSWRKLRTYIFRPLLALF
ATSTLIGSFYVLIARLLLRKPEGGMDDEEVYEFWGLLLVTVWMSVVLLLD
GYNVVGLFRGYTSLGVELERDKEGHVQMGEVVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029377TMEM220