prot_A-nodosum_M_contig12.102.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12.102.1
Unique Nameprot_A-nodosum_M_contig12.102.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length184
Homology
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: D7FJG1_ECTSI (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJG1_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 1.070e-72
Identity = 108/182 (59.34%), Postives = 134/182 (73.63%), Query Frame = 0
Query:    1 DRGNATTTRHLSCPRCRRLLIVPRAETFRCQCSMIF-RVTGSSDNQLHLCFSLRDQEANGQGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKV-KEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHLDICEALTGTSGVAFLSTVGGNPTPVIERS 180
            D+     T+HLSCPRCRRLLIVP  +TFRC CS++F +V  +    + LCFSL +QE +GQG GLPRELVER+P   VT++M    +     + GE+  K E +D D+M CRICL DY+ GD VR+LPCFHRFHV EIDDWL+RN  CPLCHLDI +ALTG+SGVAF+S + GNP PVIER+
Sbjct:   15 DQDRVVNTKHLSCPRCRRLLIVPNVDTFRCHCSLVFSKVRDAVGGTMQLCFSLSEQELHGQGCGLPRELVERLPVTVVTEEMCAKKKHQAVDANGEQAPKAEPIDDDSMTCRICLSDYQPGDKVRILPCFHRFHVSEIDDWLNRNVCCPLCHLDISKALTGSSGVAFVSVIEGNPRPVIERT 196          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A7S2Y0A3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0A3_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 4.110e-17
Identity = 56/172 (32.56%), Postives = 87/172 (50.58%), Query Frame = 0
Query:    4 NATTTRHLSCPRCRRLLIVPRAET---FRCQCSMIFRVTGSSDNQLHLCFS----LRDQEANGQGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHLDICEALTGTSGVAFLST 168
            N+T+ + + C  C R+ ++P   T   F C C     V  ++  QL    +    L   E      G  +ELV  +P ++         +   AA+A E   E   D D ++CR+CL +Y+DG+ +RVLPCFH+FH   ID+WL+R+  CPLC+  + +AL    G    +T
Sbjct:   39 NSTSVQVVMCTNCGRVGMLPHQSTTAVFLCPCGT--PVLAATPGQLLTLITRGGGLGALEGVHHHQGASKELVALLPTVT------HRGDCKAAATAQEAFGE---DDDKVSCRVCLSEYQDGECLRVLPCFHKFHKGCIDEWLERSVCCPLCNTSVDKALQQHGGADLGAT 199          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A4D9D6F5_9STRA (RING-type domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6F5_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 6.070e-13
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   87 SAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLC 149
            +A+   +   +K+     D+++CRICL DY +GD +RVLPCFHRFH +   DWL R  +CPLC
Sbjct:  108 AAEVPGSTPPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRKKTCPLC 170          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: W7U3U3_9STRA (Ring u-box domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3U3_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 3.770e-12
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 0
Query:   87 SAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLC 149
            +A+   +   +K+     D+++CRICL DY +GD +RVLPCFHRFH +   DWL R  +CPLC
Sbjct:  260 AAEVPGSTPPLKKVDSHDDDVSCRICLEDYAEGDRLRVLPCFHRFHAECSSDWLKRRKTCPLC 322          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A813F595_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813F595_POLGL)

HSP 1 Score: 68.2 bits (165), Expect = 6.430e-12
Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 0
Query:   89 KAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHLDICE 155
            +A S GE     + D D+  C +CL  ++ GDS+R+LPC HR+H D +  WL  N  CP+C  DI +
Sbjct:   21 EAQSTGEDDSRGAADDDSRKCMVCLEQFQAGDSLRILPCLHRYHRDCVVRWLSENRRCPICKHDITQ 87          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A6H5KTI9_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTI9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 6.520e-12
Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 0
Query:   60 QGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKVKEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHLDI 153
            Q  G   +LVER+P    T Q  +       A  GE+        D ++CR+CL DY+ GD++R+LPC H+FH   ID+WL R+  CPLC+  +
Sbjct:  889 QHTGASPQLVERLP----TMQYQESSRKVLVAEHGEE--------DKVSCRVCLSDYEAGDTLRILPCLHKFHRVCIDEWLGRSVLCPLCNTSV 970          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A812TRC9_9DINO (ZNRF3 protein n=1 Tax=Symbiodinium necroappetens TaxID=1628268 RepID=A0A812TRC9_9DINO)

HSP 1 Score: 69.7 bits (169), Expect = 2.790e-11
Identity = 30/70 (42.86%), Postives = 37/70 (52.86%), Query Frame = 0
Query:  109 CRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHLDICEALTGTSGVAFLSTVGGNPTPVIE 178
            C +CL D++DGD VRVL CFH FH D +D WL RN  CP+C  D+    TG         +     PV  
Sbjct:   79 CAVCLEDFRDGDLVRVLRCFHTFHRDCVDTWLARNHLCPICKQDVAGQPTGKERKYIACCLASEVQPVTS 148          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A2L2Y4S9_PARTP (RING finger protein 38 (Fragment) n=2 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2Y4S9_PARTP)

HSP 1 Score: 67.0 bits (162), Expect = 2.810e-11
Identity = 24/46 (52.17%), Postives = 34/46 (73.91%), Query Frame = 0
Query:  106 NMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCHL 151
            N  C++CL DY++GD++R+LPCFH FH   ID WL  N +CP+C +
Sbjct:   54 NKECQVCLSDYENGDTLRILPCFHEFHTPCIDPWLKINHTCPVCRV 99          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A8H7V3W4_9FUNG (RING-type domain-containing protein n=1 Tax=Mucor saturninus TaxID=64648 RepID=A0A8H7V3W4_9FUNG)

HSP 1 Score: 70.1 bits (170), Expect = 4.520e-11
Identity = 30/58 (51.72%), Postives = 39/58 (67.24%), Query Frame = 0
Query:   98 KEESLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLD-RNSSCPLCHLDIC 154
            +E+ +DT++  C ICL DYK+G+S+R LPC H FH   ID WL  R   CP+C  DIC
Sbjct:  212 REKIVDTEHTECAICLEDYKEGESIRTLPCKHEFHKGCIDIWLTTRKKFCPICKFDIC 269          
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Match: A0A7S1JI44_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1JI44_9EUGL)

HSP 1 Score: 67.8 bits (164), Expect = 6.000e-11
Identity = 26/41 (63.41%), Postives = 33/41 (80.49%), Query Frame = 0
Query:  109 CRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLC 149
            C +CL +Y+DGDS+RVL C H FH D +D+WLDRN +CPLC
Sbjct:   30 CILCLSEYEDGDSLRVLNCEHIFHADCVDEWLDRNKTCPLC 70          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJG1_ECTSI1.070e-7259.34RING-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A7S2Y0A3_9STRA4.110e-1732.56Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D6F5_9STRA6.070e-1347.62RING-type domain-containing protein n=1 Tax=Nannoc... [more]
W7U3U3_9STRA3.770e-1247.62Ring u-box domain-containing protein n=1 Tax=Nanno... [more]
A0A813F595_POLGL6.430e-1241.79Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A6H5KTI9_9PHAE6.520e-1239.36RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A812TRC9_9DINO2.790e-1142.86ZNRF3 protein n=1 Tax=Symbiodinium necroappetens T... [more]
A0A2L2Y4S9_PARTP2.810e-1152.17RING finger protein 38 (Fragment) n=2 Tax=Parastea... [more]
A0A8H7V3W4_9FUNG4.520e-1151.72RING-type domain-containing protein n=1 Tax=Mucor ... [more]
A0A7S1JI44_9EUGL6.000e-1163.41Hypothetical protein (Fragment) n=1 Tax=Eutreptiel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 109..149
e-value: 4.6E-4
score: 29.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 108..149
e-value: 5.3E-11
score: 42.7
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 109..150
score: 10.453364
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 63..155
e-value: 7.0E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR45977TARGET OF ERK KINASE MPK-1coord: 97..153
NoneNo IPR availablePANTHERPTHR45977:SF28TARGET OF ERK KINASE MPK-1coord: 97..153
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 109..149
e-value: 1.36151E-15
score: 65.4009
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 99..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:1449219..1455322 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.102.1mRNA_A-nodosum_M_contig12.102.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12 1449219..1455322 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12.102.1 ID=prot_A-nodosum_M_contig12.102.1|Name=mRNA_A-nodosum_M_contig12.102.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=184bp
DRGNATTTRHLSCPRCRRLLIVPRAETFRCQCSMIFRVTGSSDNQLHLCF
SLRDQEANGQGFGLPRELVERMPAISVTQQMVDGWESAKAASAGEKVKEE
SLDTDNMACRICLHDYKDGDSVRVLPCFHRFHVDEIDDWLDRNSSCPLCH
LDICEALTGTSGVAFLSTVGGNPTPVIERSTGR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD