prot_A-nodosum_M_contig1195.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1195.4.1
Unique Nameprot_A-nodosum_M_contig1195.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1002
Homology
BLAST of mRNA_A-nodosum_M_contig1195.4.1 vs. uniprot
Match: A0A6H5KJ15_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ15_9PHAE)

HSP 1 Score: 326 bits (835), Expect = 9.990e-93
Identity = 261/683 (38.21%), Postives = 348/683 (50.95%), Query Frame = 0
Query:    1 MADSPPVTRKRGKQNDGERTSARDRRY--------------GYNDWRDAA------ESERVLVDKRKKLLRAIPTSIPGVTGILKGQAKRDLREMGAFVDMKVLDAEEVAPGGVMVTPRPLIPKANQLEAKQARLARWEKDPSLIEKDMADRREAVSRAEEKDLRMKAQQEAWERGYLSHRAHLMARRRPTASWSRTVEATSSSNTSAPAGGASATIGSPVPVAGETEAALEEGDGRASAVGDVEGPDGGNMKGNGNGGNIAVVTGSNGRRREGEGGALGGIDAAGTGVAV----WSCEGEEEEEEASLRELERVVMNRAGLEGEFDMTKVIDVLTDRSRQVMSARREHACLLAQQQQHDQNHK--DNGDDEAKRDLDKVHPHPGDMALLGRWQELLRSTDLVGEGRRP---PDGMDDAYHEAC--DSDETLLRTK-SATL--------------LIPRGLDLVPSMRAPRYPTLLQQLVQHQXXXXXXXXXXXXTNAKETSRKGSNASNAIEMEVEGRKSGPALTVVARMARAMECVPWIGIEDGGGTAGVQGVPTVVTAVDARTEDPESAQTIAGVKGSIGERVQWFPRGLPMEMAKSEGGYDERQSAYYVSKTSQALDRLKNLMKETAKRQEEMELRRRLKAKEALGLVRAVADHEKLRQEHLKRMKSLRKQLEMLEGAK 637
            M DSPPVTRKRG+ NDG+R   RDRR                 +DWR++       E E+ + DKRKKL+RAIPT+IPGV+ +++G A+ D+RE+ A VDM+VL  EEVAPG V  TPRP +PKANQLE K+AR+ARW+KDPS IEKDMA +REA+ +AE++D +++A++ AWER YL  RAHL A RRPTA+WS                        P                                                                 GTG AV    +            +R  E  VM RAGLEG+FDMTKV++VL   SR  MSAR+EH  L+A+QQ    +    + G  E + + D+  PHPGD   L RW+ELLRS  + G   RP     G+ +A       D+D+    T  +A+L              L+P+GLDL+PSMRAPRY   + +  +H                 + S  G+ A +                     A+A+E VPW+    G G++G          V A      +A  +A   G + +RVQWFPRGLP E     G  D+R+SA + ++ S A+DRL   ++ET+KRQ EME+RRR K  EA+ LVRA ADHE++RQ+H +RMK+LR QLE LEG K
Sbjct:    1 MVDSPPVTRKRGRHNDGDRAVTRDRRLVSIVRTIIIGVLWNAGSDWRESLRNARQEEMEKAIADKRKKLVRAIPTNIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEIEKDMAKQREALKKAEKEDEQLEAERHAWERWYLVLRAHLTAGRRPTATWS------------------------PAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDGTGKAVNDGRYRXXXXXXXXXERVRGFEAEVMKRAGLEGKFDMTKVLNVLAGCSRDAMSARQEHTTLIAKQQSGGDSKAGAEGGGAEHEGERDEALPHPGDEGSLRRWEELLRSAHVHGVRWRPGVIEGGLTNAPPRGTLTDTDDASGPTPGTASLRGGDRQQQQQQREPLVPKGLDLLPSMRAPRY---MPRPGEHV----------------DISGSGATAKDG--------------------AQAIEYVPWV---VGSGSSG---------RVMAGHTGGAAAPMLAA--GGVNDRVQWFPRGLPKESVTGMG-QDQRESALFNTRASMAIDRLGEQVEETSKRQAEMEIRRREKVGEAVCLVRAAADHERVRQDHFRRMKALRAQLESLEGTK 605          
BLAST of mRNA_A-nodosum_M_contig1195.4.1 vs. uniprot
Match: D7G695_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G695_ECTSI)

HSP 1 Score: 323 bits (827), Expect = 1.310e-91
Identity = 261/684 (38.16%), Postives = 339/684 (49.56%), Query Frame = 0
Query:    8 TRKRGKQNDGERTSARDRRYGYNDWRDAA------ESERVLVDKRKKLLRAIPTSIPGVTGILKGQAKRDLREMGAFVDMKVLDAEEVAPGGVMVTPRPLIPKANQLEAKQARLARWEKDPSLIEKDMADRREAVSRAEEKDLRMKAQQEAWERGYLSHRAHLMARRRPTASWSRTVEATSSSNTSAPAGGASATIGSPVPVAGETEAALEE-------------------GDGRASAVGDVEGPDGGNMKGNGNGGNIAVVTGSNGRRREGEGGALGGIDAAGTGVAVWSCEGEEEEEEASLRELERVVMNRAGLEGEFDMTKVIDVLTDRSRQVMSARREHACLLAQQQQHDQ---NHKDNGDDEAKRDLDKVHPHPGDMALLGRWQELLRSTDLVGEGRRPPDGMDDAYHEA------CDSDET---LLRTKSATL-------------LIPRGLDLVPSMRAPRYPTLLQQLVQHQXXXXXXXXXXXXTNAKETSRKGSNASNAIEMEVEGRKSGPALTVVARMARAMECVPWIGIEDGGGTAGVQGVPTVVTAVDARTEDPESAQTIAGVKGSIGERVQWFPRGLPMEMAKSEGGYDERQSAYYVSKTSQALDRLKNLMKETAKRQEEMELRRRLKAKEALGLVRAVADHEKLRQEHLKRMKSLRKQLEMLEGAKGSLS 641
            +R RG+ NDG+R   RDRR   +DWR++       E E+ + DKRKKL+RAIPT+IPGV+ +++G A+ D+RE+ A VDM+VL  EEVAPG V  TPRP +PKANQLE K+AR+ARW+KDPS +EKDMA +REA+ +AEE+D +++A+++AWER YL  RAHL A RRPTA+WS                                                         GD    AV                          NGR R G                     GE       +R LE  VM RAGLEG+FDMTKV++VL   SR  M AR+EH  L+A+QQ         KD G  E + + +   PHPGD   L RW+ELLRS  + G GR  P  ++     A       D+D+      RT S+               L+P+GLDL+PSMRAPRY                              R G +A            SG   T     A+A+E VPW+    G G++G                    A T     G + +RVQWFPRGLP E     G  DER+SA + ++ S A+DRL   ++ET+KRQ EME+RRR K  EA+ LVRA ADHE++RQ+H +RMK+LR QL+ LEG KG  S
Sbjct:   39 SRARGRHNDGDRAVTRDRRNAGSDWRESLRNSRQEEMEKAVADKRKKLVRAIPTTIPGVSAVVRGDARSDIREIEALVDMQVLQPEEVAPGAVQATPRPPMPKANQLEPKRARMARWKKDPSEMEKDMAKQREALKKAEEEDEQLEAERDAWERWYLVLRAHLTAGRRPTATWSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDSTGKAV-------------------------DNGRFRTG---------------------GEXXXXXERVRGLEVEVMKRAGLEGKFDMTKVLNVLAGCSRDAMFARQEHTTLVAKQQSGGDAKAGAKDGGA-EHEGERNDASPHPGDEGSLRRWEELLRSAHVNG-GRWRPGVIEGGVTNAPPGGTSTDTDDASGPTPRTASSRXXXXXXXXXXXREPLVPKGLDLLPSMRAPRY----------------------------MLRPGEHADI----------SGSGATAEDE-AQAIEYVPWV---VGSGSSG-----------RVMAGHTGGAATPMPAAGGVNDRVQWFPRGLPKESVTGMG-QDERESALFNTRASMAIDRLGEQVEETSKRQAEMEIRRREKVGEAVCLVRAAADHERVRQDHFRRMKALRAQLQSLEGTKGPSS 620          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1195.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJ15_9PHAE9.990e-9338.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G695_ECTSI1.310e-9138.16Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 567..594
NoneNo IPR availableCOILSCoilCoilcoord: 430..455
NoneNo IPR availableCOILSCoilCoilcoord: 609..636
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 330..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 711..936
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 631..692
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 918..936
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 438..454
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 831..881
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 172..219
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 337..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..993
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 432..468
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 959..1001
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 174..193

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1195contigA-nodosum_M_contig1195:40080..51829 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1195.4.1mRNA_A-nodosum_M_contig1195.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1195 39762..53018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1195.4.1 ID=prot_A-nodosum_M_contig1195.4.1|Name=mRNA_A-nodosum_M_contig1195.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1002bp
MADSPPVTRKRGKQNDGERTSARDRRYGYNDWRDAAESERVLVDKRKKLL
RAIPTSIPGVTGILKGQAKRDLREMGAFVDMKVLDAEEVAPGGVMVTPRP
LIPKANQLEAKQARLARWEKDPSLIEKDMADRREAVSRAEEKDLRMKAQQ
EAWERGYLSHRAHLMARRRPTASWSRTVEATSSSNTSAPAGGASATIGSP
VPVAGETEAALEEGDGRASAVGDVEGPDGGNMKGNGNGGNIAVVTGSNGR
RREGEGGALGGIDAAGTGVAVWSCEGEEEEEEASLRELERVVMNRAGLEG
EFDMTKVIDVLTDRSRQVMSARREHACLLAQQQQHDQNHKDNGDDEAKRD
LDKVHPHPGDMALLGRWQELLRSTDLVGEGRRPPDGMDDAYHEACDSDET
LLRTKSATLLIPRGLDLVPSMRAPRYPTLLQQLVQHQQQERQEEEEEEAT
NAKETSRKGSNASNAIEMEVEGRKSGPALTVVARMARAMECVPWIGIEDG
GGTAGVQGVPTVVTAVDARTEDPESAQTIAGVKGSIGERVQWFPRGLPME
MAKSEGGYDERQSAYYVSKTSQALDRLKNLMKETAKRQEEMELRRRLKAK
EALGLVRAVADHEKLRQEHLKRMKSLRKQLEMLEGAKGSLSSDAEEPAGV
GDNGDPEASDSEMSSTTRAADEGDRGNDPASPKVASTSATNAVSPTARVT
ATASAADAAGATSTSPLGVTVATTRSRSPSSPRALMTMPTPTSPPGKKGK
GRGKCREADAKGGESLPGHQQNQQTVRGSRKGEEEVASATSSTSPTSPPS
SSSPCPSPSPGLEKTPGVAAVAAPVGSDEALSKDDGSRIVERGSEGGGVR
ECDDGDDEKGDNSSSDSKDPPVEDSFEAVASDSRKRALGGEAGSGVVVRG
PSKRRRSADVVMAMSVNDDSGTGRNASAVNGETSGASLLSTRHTGVQVST
AAGFKSKGNGTVMTPLSSGGGKSKTKAATSGRRASSTRQGQGSRGRWGGR
R*
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