prot_A-nodosum_M_contig1194.12.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1194.12.2
Unique Nameprot_A-nodosum_M_contig1194.12.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length515
Homology
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: D7G690_ECTSI (NOT2_3_5 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G690_ECTSI)

HSP 1 Score: 498 bits (1282), Expect = 1.590e-169
Identity = 296/384 (77.08%), Postives = 318/384 (82.81%), Query Frame = 0
Query:  121 GQRAMHDSLPYNPAAPDVLTGVGN-KGAAGMTSQR--GQQLAMDGSGAGPSGFSGMGGGGG-NDLGAHTLXXXXXXXXXXXXXXXXXXXXXXXXX-HSSVSFDLKEFPVLGSGMANLNLGGNEEGYSRQAYRGEPQGFSMHNDDFPALPVATPSLSGQTGSAALGGTAFHPPSTSEGMGAGALRGAPGQARPMGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFGGNVQMI 499
            GQRAM D +PY   A D+L+ VGN KGA  M SQR    QLAMDG+GAG + F G       NDLGAH LXXXXXXXXXXXXXXXXXXXXXXX   HSS+SFD+KEFP LGSGMANLNLGG EEGYSRQAYRGEPQGFSM +DDFPALPVA PS +G TGS+ALGG  FHPP+ +EGMGAGALRGAPGQ RPMGPG+AGGPTAAAVVAA+EGKAKKYGLLGLLGVIRMTDPDLN LALGSDLTTVGLNLDSAEVLYA+FASPWAE+PA PEPQ++LP CYYLQPPPLKPMHLK FQLETLFYIFYSMPQD  QA             YAAQEL+ REWRF SVLKLWFKRV  ADGNVPP V+YIYFD  EW+RQ+F GNVQMI
Sbjct:  142 GQRAMQDGMPY--PATDLLSTVGNNKGATNMASQRLNAGQLAMDGAGAGLTPFGGXXXXXXXNDLGAHGLXXXXXXXXXXXXXXXXXXXXXXXPGGHSSLSFDMKEFPALGSGMANLNLGGGEEGYSRQAYRGEPQGFSMQSDDFPALPVAAPSAAGPTGSSALGGATFHPPTATEGMGAGALRGAPGQPRPMGPGIAGGPTAAAVVAASEGKAKKYGLLGLLGVIRMTDPDLNTLALGSDLTTVGLNLDSAEVLYASFASPWAEEPATPEPQFTLPSCYYLQPPPLKPMHLKNFQLETLFYIFYSMPQDVLQA-------------YAAQELHAREWRFQSVLKLWFKRVGPADGNVPPNVEYIYFDHNEWQRQFFAGNVQMI 510          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7R9W176_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W176_9STRA)

HSP 1 Score: 223 bits (568), Expect = 7.940e-64
Identity = 111/186 (59.68%), Postives = 133/186 (71.51%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            YGLLGLL +IRMTD D N LALGSDLT +G+NL+S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR  ++DG       G+QYIYFD   WER+ F GNVQ +    G L+EDD+R+K
Sbjct:  255 YGLLGLLSIIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVDLKLWFKRGGASDGLAATANGGIQYIYFDVNTWERRLFNGNVQSVT--GGFLSEDDVRVK 425          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7S0C8Q4_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C8Q4_9STRA)

HSP 1 Score: 219 bits (559), Expect = 8.160e-64
Identity = 109/183 (59.56%), Postives = 131/183 (71.58%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            YGLLGLLGVIRM+D D N LALGSDLT +GLNL+S+E LY+TFASPW++ P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+R+WR+H  LKLWFKR +  D     G QYIYFD   WER+ F G++    P NG L+E+D+R+K
Sbjct:  148 YGLLGLLGVIRMSDADRNALALGSDLTLLGLNLNSSEHLYSTFASPWSDSPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSRDWRYHVDLKLWFKRASPVDVPNANGTQYIYFDINSWERRIFNGSMHQNFP-NGFLSEEDVRVK 316          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7S2EBZ5_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBZ5_TRICV)

HSP 1 Score: 222 bits (565), Expect = 2.550e-63
Identity = 113/186 (60.75%), Postives = 132/186 (70.97%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            +GLLGLL VIRMTD D N LALGSDLT +G+NL+S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR   +DG       G QYIYFD   WER+ F GNVQ I    GLL+EDD+R+K
Sbjct:  261 FGLLGLLSVIRMTDADRNALALGSDLTALGMNLNSSDKLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPRDVLQA-------------YAAQELYSREWRYHVDLKLWFKRAGPSDGLTATANGGNQYIYFDVNTWERRLFNGNVQTIT--GGLLSEDDVRVK 431          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A836CGQ9_9STRA (NOT2_3_5 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGQ9_9STRA)

HSP 1 Score: 213 bits (542), Expect = 6.250e-63
Identity = 111/186 (59.68%), Postives = 131/186 (70.43%), Query Frame = 0
Query:  334 LLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFGGNVQM-IQPGNGL----LTEDDIRIK 514
            L GLL VIRMTDPDLNMLALGSDLTT+GLNLDS+EVLYATFA PWAE P+  EPQ+ LP CYY+QPP LK  H  KF LETLFYIFY+MP D  QA             YAAQELY R+WRFH+ LKLW KR T+AD      V++I+FD   WER+ F G + M +  G GL    ++E+D+R+K
Sbjct:   25 LTGLLRVIRMTDPDLNMLALGSDLTTLGLNLDSSEVLYATFAGPWAEGPSSGEPQFQLPQCYYMQPPSLKTTHFSKFTLETLFYIFYAMPSDILQA-------------YAAQELYLRDWRFHADLKLWLKRATAADSAAQ--VRFIFFDHNVWERRGFSGPLPMSVAVGGGLTGGLMSEEDVRVK 195          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7S2YKN9_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YKN9_9STRA)

HSP 1 Score: 203 bits (517), Expect = 2.280e-59
Identity = 105/191 (54.97%), Postives = 126/191 (65.97%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIP---EPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGV-----QYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            YGLLGLLGVIRMTD D N LALG+DLT +GLNL SAE +Y+TF+SPW+   +     +P Y LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             Y+AQELY+REWR+H  LKLWFKR   +DG           QY+YFD   WER+ F GN+      NG L E+DIR+K
Sbjct:    9 YGLLGLLGVIRMTDADRNALALGTDLTMLGLNLGSAEHIYSTFSSPWSSTDSTQPTKDPHYQLPSCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YSAQELYSREWRYHGELKLWFKRAGPSDGLAASSAASAAGQYLYFDINTWERRLFNGNMNQTMT-NGFLPEEDIRVK 185          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A8J2SZ99_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SZ99_9STRA)

HSP 1 Score: 215 bits (547), Expect = 3.060e-59
Identity = 114/191 (59.69%), Postives = 131/191 (68.59%), Query Frame = 0
Query:  331 KYGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPM-------HLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            KYGLLGLL VIRMT+ DLN LALGSDLTT+GLNL+S+E LY+TFASPWAE P   EPQ+SLP CYY+QPPPLK         HL KFQLETLFYIFY+MP+D  QA             YAAQELY REW++H  LKLWFKR +SADG      QYI+FD K WE + F          +GLL ED +R+K
Sbjct:  402 KYGLLGLLDVIRMTNADLNTLALGSDLTTLGLNLNSSECLYSTFASPWAEAPITREPQFSLPLCYYMQPPPLKTQYLSQNKSHLSKFQLETLFYIFYAMPKDVLQA-------------YAAQELYNREWQYHQDLKLWFKRSSSADGLNFSNNQYIFFDIKTWECRVFSNMHAAGNFSSGLLHEDSVRVK 579          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7S2PH42_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PH42_9STRA)

HSP 1 Score: 204 bits (519), Expect = 9.850e-59
Identity = 107/186 (57.53%), Postives = 128/186 (68.82%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSAD---GNVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            YGLLGLL VIRMTD D N LALGSDLT +GLNL+S + LY+TF  P+++KPA  EP Y LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELYTR+WR+H   K+WFK+ T +D   GNV  G QYIYFD   WER+ +G   Q I    G L E+D+R+K
Sbjct:   84 YGLLGLLSVIRMTDADRNRLALGSDLTVLGLNLNSNDNLYSTFGGPFSDKPATREPHYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYTRDWRYHVESKVWFKQATPSDVPNGNVAAG-QYIYFDINTWERRLYGNVNQNI--AGGFLPEEDVRVK 253          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A6U3ZWB8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3ZWB8_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.270e-58
Identity = 107/179 (59.78%), Postives = 126/179 (70.39%), Query Frame = 0
Query:  339 GVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            GVIRM+D D N LALGSDLT +GLNL S++ LY+TFASPW+E P   EPQY LP CYY+QPP LK  HL KFQLETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR   ADG   N   GVQYIYFD   WER+ F GN+      +GLL+EDD+R++
Sbjct:  311 GVIRMSDADRNALALGSDLTALGLNLSSSDQLYSTFASPWSESPTTREPQYQLPMCYYMQPPALKTGHLSKFQLETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVELKLWFKRAGPADGVANNAGSGVQYIYFDINSWERRLFNGNMNQ-NITSGLLSEDDVRVQ 475          
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Match: A0A7S2XLH6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XLH6_9STRA)

HSP 1 Score: 210 bits (534), Expect = 2.720e-58
Identity = 106/186 (56.99%), Postives = 131/186 (70.43%), Query Frame = 0
Query:  332 YGLLGLLGVIRMTDPDLNMLALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPPPLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYTREWRFHSVLKLWFKRVTSADG---NVPPGVQYIYFDQKEWERQYFGGNVQMIQPGNGLLTEDDIRIK 514
            YGLLGLLGVIRM+D D N LALGSDLT++GLNL+S++ LY+TFA PW+E P   EPQY LP CYY+QPP LK  HL KF LETLFYIFY++P+D  QA             YAAQELY+REWR+H  LKLWFKR    DG   N   G Q+++FD   WER+ F GN+      +GL++E+D+R+K
Sbjct:  311 YGLLGLLGVIRMSDADRNALALGSDLTSLGLNLNSSDQLYSTFAGPWSENPTTREPQYQLPMCYYMQPPALKTGHLSKFALETLFYIFYALPKDVLQA-------------YAAQELYSREWRYHVDLKLWFKRAGPNDGVGNNGGAGNQFLFFDINTWERRIFNGNMNQ-NITSGLMSEEDVRVK 482          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1194.12.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G690_ECTSI1.590e-16977.08NOT2_3_5 domain-containing protein n=2 Tax=Ectocar... [more]
A0A7R9W176_9STRA7.940e-6459.68Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S0C8Q4_9STRA8.160e-6459.56Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S2EBZ5_TRICV2.550e-6360.75Hypothetical protein n=1 Tax=Trieres chinensis Tax... [more]
A0A836CGQ9_9STRA6.250e-6359.68NOT2_3_5 domain-containing protein n=1 Tax=Tribone... [more]
A0A7S2YKN9_9STRA2.280e-5954.97Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A8J2SZ99_9STRA3.060e-5959.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2PH42_9STRA9.850e-5957.53Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6U3ZWB8_9STRA1.270e-5859.78Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2XLH6_9STRA2.720e-5856.99Hypothetical protein (Fragment) n=1 Tax=Attheya se... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007282NOT2/NOT3/NOT5, C-terminalPFAMPF04153NOT2_3_5coord: 372..490
e-value: 5.4E-17
score: 62.1
IPR038635CCR4-NOT complex subunit 2/3/5, N-terminal domain superfamilyGENE3D2.30.30.1020coord: 324..492
e-value: 1.6E-45
score: 156.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..53
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 18..177
NoneNo IPR availablePANTHERPTHR23326:SF3CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 2coord: 19..489
IPR040168Not2/Not3/Not5PANTHERPTHR23326CCR4 NOT-RELATEDcoord: 19..489

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1194contigA-nodosum_M_contig1194:119729..130954 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1194.12.2mRNA_A-nodosum_M_contig1194.12.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1194 119712..131613 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1194.12.2 ID=prot_A-nodosum_M_contig1194.12.2|Name=mRNA_A-nodosum_M_contig1194.12.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=515bp
MNDASGYGGGPGGFGGSFSMHSMGGGGRSGVHGPGGGSQMPTAFSTLARS
TSLGMPGATGGGGGVGSAHGQAHGSMVSMVGGAPGGGNGNGGGSGAPRDS
REGGGGGGAGGMYMQQPAQGGQRAMHDSLPYNPAAPDVLTGVGNKGAAGM
TSQRGQQLAMDGSGAGPSGFSGMGGGGGNDLGAHTLGGGGGGIGGGAGGG
GNGGLGGGPGGHSSVSFDLKEFPVLGSGMANLNLGGNEEGYSRQAYRGEP
QGFSMHNDDFPALPVATPSLSGQTGSAALGGTAFHPPSTSEGMGAGALRG
APGQARPMGPGVAGGPTAAAVVAATEGKAKKYGLLGLLGVIRMTDPDLNM
LALGSDLTTVGLNLDSAEVLYATFASPWAEKPAIPEPQYSLPGCYYLQPP
PLKPMHLKKFQLETLFYIFYSMPQDAYQASLRRSDRGRHYIAYAAQELYT
REWRFHSVLKLWFKRVTSADGNVPPGVQYIYFDQKEWERQYFGGNVQMIQ
PGNGLLTEDDIRIK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007282NOT2/3/5_C
IPR038635CCR4-NOT_su2/3/5_N_sf
IPR040168Not2/3/5