prot_A-nodosum_M_contig1190.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1190.18.1
Unique Nameprot_A-nodosum_M_contig1190.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length298
Homology
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: D8LKT4_ECTSI (DUF202 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKT4_ECTSI)

HSP 1 Score: 314 bits (805), Expect = 2.520e-104
Identity = 196/303 (64.69%), Postives = 217/303 (71.62%), Query Frame = 0
Query:    2 SLHRRKGGALDIG-KKTIVVRYEGRDHTVSWFSGASDEAISRAIDSALGFPRGTPAVIRDPEDGSALAISDSLPDGLTLDATPVKPADALSSIGGGGLGIAMSKLHKRGGGAVDESSALPRSDDGFHNSSENATLLKGNAN------GGSGGDXXXXXXXXXXXXXXXXXGGAKEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGGVTIVKDA 297
            SL  R GG LD+G KK I VRYEGR+H VSWF+GASDEAI+R I+ AL  PRGTPAV+RDPEDGSALA+SDSLPDGLT+DAT V PA +                    GG  D   A   S +GF+   E+      +A       GG G       XXXXXXXXXXXX  A EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSL+SL DDMG+  MDS A+ LGVAFV CTLFTYMTGWLRYTRVK+VLTWT  QVKG FGRFGL+YFT FLG SLVLTVP+Y   GV +V+DA
Sbjct:    3 SLRHRTGGTLDVGSKKAITVRYEGREHAVSWFAGASDEAITRTIELALRLPRGTPAVVRDPEDGSALAVSDSLPDGLTVDATAV-PACS--------------------GGDNDRRRA-ESSGNGFYGRGESGNNKNSDAKPAHDSAGGIG-------XXXXXXXXXXXXXAAHEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLISLTDDMGSATMDSTAMALGVAFVACTLFTYMTGWLRYTRVKEVLTWTGSQVKGRFGRFGLKYFTWFLGASLVLTVPVYFIAGVNVVEDA 276          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2FKJ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FKJ2_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.660e-39
Identity = 102/261 (39.08%), Postives = 133/261 (50.96%), Query Frame = 0
Query:   15 KKTIVVRYEGRDHTVSWFSGASDEAISRAIDSALGFPRGTPAVIRDPEDGSALAISDSLPDGLTLDATPVKPADALSSIGGGGLGIAMSKLHKRGGGAVDESSALPRSDDGFHNSSENATLLKGNANGGSGGDXXXXXXXXXXXXXXXXXGGAKEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFL 275
            +KT+VVR  G++ TV WF GASDE+I  +I SAL   +    V RD  DG+ +A+S ++P GLTL                                 VD S ++P +      S+E  TL                                  FRG++LKFERV AHLANERTWLAWVRTALS L +A SLL+L DD  + +  +L  V+G   V   LFT++TGWLRY RVK VL  T  ++  +FGRFGL +  RF+
Sbjct:    4 RKTVVVRGHGKEATVGWFEGASDESIKTSITSAL-LMKADSIVARD-LDGNVVAVSQAMPSGLTL--------------------------------VVDPSDSVPTTTTA-RASAEQRTL---------------------------------NFRGQVLKFERVQAHLANERTWLAWVRTALSALTIAFSLLTLSDDASSASQLAL-FVMGSCMVANVLFTFVTGWLRYVRVKDVLMLTRSEMSENFGRFGLSHQARFM 195          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2Y0E1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y0E1_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.480e-30
Identity = 64/121 (52.89%), Postives = 82/121 (67.77%), Query Frame = 0
Query:  168 KEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLY 288
            K+FRGELLKFERVNAHLANERT+LAWVRTALSVL  A S+ SL +D    A   +  + G  +VV  LFTY TGW+RY++V+ +L   + +VK  FGRFGL +  +FL    + T   Y +
Sbjct:  120 KKFRGELLKFERVNAHLANERTFLAWVRTALSVLSSAFSIDSLTEDFSDGAFKVMVFIFGCLYVVGVLFTYTTGWVRYSQVRAILGLPASKVKAQFGRFGLSHVAKFLAFLFLFTAIGYCF 240          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2WVC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVC3_9STRA)

HSP 1 Score: 121 bits (303), Expect = 2.390e-29
Identity = 68/124 (54.84%), Postives = 81/124 (65.32%), Query Frame = 0
Query:  170 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLAL---VLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGG 290
            FRG++LKFERV AHLANERTWLAWVRTAL+ L ++ +LL+L DD      D LAL   V+G   VV  LFT++TGWLRY RVK VL     ++   FGRFGL +  RFL   LV     YL G 
Sbjct:  115 FRGQVLKFERVQAHLANERTWLAWVRTALAALSISFTLLTLSDD---ATKDWLALFLFVVGCLMVVNVLFTFITGWLRYVRVKDVLMLRKQEMSDEFGRFGLSHHARFLSALLVAISIAYLGGS 235          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2GM95_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM95_9STRA)

HSP 1 Score: 117 bits (292), Expect = 2.750e-28
Identity = 62/121 (51.24%), Postives = 77/121 (63.64%), Query Frame = 0
Query:  170 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGG 290
            FRG++LKFERV AHLANERTWLAWVRTALS L +A SLL+L D+     +     V+G   V   L T++TGWLRY RVK VL      +  +FGR GL +  RFL + L +    Y+ GG
Sbjct:   67 FRGQVLKFERVQAHLANERTWLAWVRTALSALSIAFSLLTLSDESTKQWLKVTLFVVGSLMVANVLMTFVTGWLRYVRVKDVLMLDKQDMSANFGRLGLSHQARFLSLLLFVISFAYITGG 187          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S3YD22_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YD22_HETAK)

HSP 1 Score: 114 bits (285), Expect = 1.100e-26
Identity = 61/121 (50.41%), Postives = 79/121 (65.29%), Query Frame = 0
Query:  168 KEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLY 288
            +EF+GELLKFERVNAHLANERTWLAWVRTAL+VL  A + L L +D  +        VLG  ++   L TY TGWLRY +V+++L      +K  F RFGL +  R+L V L++T   Y +
Sbjct:  118 QEFQGELLKFERVNAHLANERTWLAWVRTALAVLSSAFTFLGLTEDFAS-GTQIFVFVLGGFYIGNVLLTYGTGWLRYAQVREILGLPGSMIKPKFNRFGLSHQARYLAVLLLVTGVSYWF 237          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: F0YI70_AURAN (Expressed protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI70_AURAN)

HSP 1 Score: 105 bits (263), Expect = 8.010e-24
Identity = 53/118 (44.92%), Postives = 74/118 (62.71%), Query Frame = 0
Query:  170 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYL 287
            FR +L+KFE + AHLANERTWLAWVRT+LS L VA SLL+L+ D     +  +  +LG  F+V     ++TGWLRY R++ VL  T  +V   F R G+++  R +G+  +     YL
Sbjct:   88 FRKQLIKFENIQAHLANERTWLAWVRTSLSALSVAFSLLTLVGDSRESWLAVVLFLLGSGFIVSVFTAFLTGWLRYARIRDVLMLTKREVPAHFHRIGVRHQARLMGLLFIFLTATYL 205          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S3K4A5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4A5_9STRA)

HSP 1 Score: 103 bits (257), Expect = 5.420e-23
Identity = 53/124 (42.74%), Postives = 77/124 (62.10%), Query Frame = 0
Query:  167 AKEFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGG 290
            ++ FR +L+KFE + AHLANERT+LAW+RTAL+ L ++ SLL+L+ D     + +    LG AFV     T++TGWLR+ R++ +L    +QV   F R GL +   F+ +   L   LYL GG
Sbjct:   79 SRGFRRQLIKFENIQAHLANERTFLAWIRTALASLSISFSLLALVADASKNWLAACLYALGAAFVFSVFTTFLTGWLRFARIRDILMLAQNQVPTDFHRIGLSHQAYFIAILCGLLTFLYLVGG 202          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2G4H1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G4H1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 4.790e-20
Identity = 49/121 (40.50%), Postives = 72/121 (59.50%), Query Frame = 0
Query:  170 FRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGG 290
            F+ ++LKF+R+NAHLANERTWLAW+RT  S+L   L+L +  +D  +         +G A +V   FTYMTGW+RY +VK++L    + +    GR  L+Y T  +  +L     +Y  GG
Sbjct:   58 FQKQMLKFDRINAHLANERTWLAWIRTTFSLLSCGLTLQTYANDSSSGTWHWWLFAVGCATIVSMDFTYMTGWIRYGKVKEILQQNKEVLGPKMGRLKLKYQTFLVFGTLCTVAVVYWMGG 178          
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Match: A0A7S2DFA2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DFA2_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 1.210e-15
Identity = 47/121 (38.84%), Postives = 69/121 (57.02%), Query Frame = 0
Query:  169 EFRGELLKFERVNAHLANERTWLAWVRTALSVLGVALSLLSLMDDMGTVAMDSLALVL---GVAFVVCTLFTYMTGWLRYTRVKKVLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLY 286
            +F+ + +KFERV +HLANERTWLAW+R AL++L  A ++  L D +      +++L L   G+ +V+    T + GWLRY R K +L  +   +   FG  G+      LG  LV TV  Y
Sbjct:   98 QFQDQYVKFERVLSHLANERTWLAWIRAALTMLSSAFTIWKLYDSVNDKIHPTISLALYSLGLCYVLVVPLTVVVGWLRYERTKHILGLSKVDIHEYFGSLGVVIQAALLGSVLVFTVGCY 218          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1190.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LKT4_ECTSI2.520e-10464.69DUF202 domain-containing protein n=2 Tax=Ectocarpu... [more]
A0A7S2FKJ2_9STRA4.660e-3939.08Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S2Y0E1_9STRA3.480e-3052.89Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2WVC3_9STRA2.390e-2954.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2GM95_9STRA2.750e-2851.24Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S3YD22_HETAK1.100e-2650.41Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
F0YI70_AURAN8.010e-2444.92Expressed protein n=1 Tax=Aureococcus anophageffer... [more]
A0A7S3K4A5_9STRA5.420e-2342.74Hypothetical protein (Fragment) n=1 Tax=Aureoumbra... [more]
A0A7S2G4H1_9STRA4.790e-2040.50Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2DFA2_9STRA1.210e-1538.84Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 183..249
e-value: 6.8E-15
score: 55.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 111..164
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..157

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1190contigA-nodosum_M_contig1190:183597..189090 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1190.18.1mRNA_A-nodosum_M_contig1190.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1190 182377..189404 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1190.18.1 ID=prot_A-nodosum_M_contig1190.18.1|Name=mRNA_A-nodosum_M_contig1190.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=298bp
MSLHRRKGGALDIGKKTIVVRYEGRDHTVSWFSGASDEAISRAIDSALGF
PRGTPAVIRDPEDGSALAISDSLPDGLTLDATPVKPADALSSIGGGGLGI
AMSKLHKRGGGAVDESSALPRSDDGFHNSSENATLLKGNANGGSGGDGGS
GSNEGGGNNGRGAGGGAKEFRGELLKFERVNAHLANERTWLAWVRTALSV
LGVALSLLSLMDDMGTVAMDSLALVLGVAFVVCTLFTYMTGWLRYTRVKK
VLTWTSDQVKGSFGRFGLQYFTRFLGVSLVLTVPLYLYGGVTIVKDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202