prot_A-nodosum_M_contig1189.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1189.7.1
Unique Nameprot_A-nodosum_M_contig1189.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length505
Homology
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BLAST of mRNA_A-nodosum_M_contig1189.7.1 vs. uniprot
Match: D7G5D6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D6_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 4.080e-47
Identity = 113/292 (38.70%), Postives = 162/292 (55.48%), Query Frame = 0 
Query:  188 DLYGTCPGGSFSDDGTPPCVVXXXXXXXXXXXSTCSPTALLYIDASDELLAIMEADAIGGFAGPGYVELDGDNSYIWDRVTLNEEDAGVLEVTGTFERDVDGDASLPSSTALFVYLE--LEDESFMRGEGSIDPSTGKFTATVMNVPEGFSKVFYSFVVLDPEETVVIDDGYGESVFYSDVISITCTSPLTITLEWSTDNSDFDMEITEPDGSSWYAWDIG-TYGFGSGDVTDGFGPEIWTVF----PGNPEAVGTYT--VRLYFLNAPGDTEWTLTARVNGEIEWIETGIY 470
            ++ G C   SFS  G PPC             + C    L+ +   + + A M ADA+GGFAGPG +      +     + L EED G + ++GTF RD DG A+LPSST++F+Y E   + + F+RG+ ++DPSTG F+  V ++P G S++  SFVV+DP E   +D    ++ F  DV +  C   LTITLEW+ + SD D+ + EP G   Y  + G   GF   D T GFGPE + +     P   + +G Y   V+LY  +A  +T W LTARV+GE+ WIE G +
Sbjct:  135 EVAGLCASNSFSSTGAPPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAGT-----IQLTEEDGGSVSLSGTFVRD-DG-AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEA--LDTAGADTAFALDVSNSACVPSLTITLEWTGEISDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATET-WRLTARVSGEVVWIEEGDF 416
[Close]
BLAST of mRNA_A-nodosum_M_contig1189.7.1 vs. uniprot
Match: D7G3X5_ECTSI (VWFD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3X5_ECTSI)

HSP 1 Score: 173 bits (439), Expect = 3.920e-44
Identity = 110/282 (39.01%), Postives = 157/282 (55.67%), Query Frame = 0 
Query:  198 FSDDGTPPCVVXXXXXXXXXXXSTCSPTALLYIDASDELLAIMEADAIGGFAGPGYVELDGDNSYIWDRVTLNEEDAGVLEVTGTFERDVDGDASLPSSTALFVYLE--LEDESFMRGEGSIDPSTGKFTATVMNVPEGFSKVFYSFVVLDPEETVVIDDGYGESVFYSDVISITCTSPLTITLEWSTDNSDFDMEITEPDGSSWYAWDIG-TYGFGSGDVTDGFGPEIWTVF----PGNPEAVGTYT--VRLYFLNAPGDTEWTLTARVNGEIEWIETGIY 470
            FS  G PPC             + C    L+ +   + + A M ADA+GGFAGPG +      +     + L EED G + ++GTF RD DG A+LPSST++F+Y E   + + F+RG+ ++DPSTG F+  V ++P G S++  SFVV+DP E   +D    ++ F  DV +  C   LTITLEW+ + SD D+ + EP G   Y  + G   GF   D T GFGPE + +     P   + +G Y   V+LY  +A  +T W LTARV+GE+ WIE G +
Sbjct:  271 FSSTGAPPCTTCPDGEVSGTGATACIRQELVGLSLPENIAAAMAADAMGGFAGPGSLTTTPAGT-----IQLTEEDGGSVSLSGTFVRD-DG-AALPSSTSVFIYTENTAQPDDFVRGQEALDPSTGAFSTVVTDIPAGSSRLLLSFVVVDPAEA--LDTAGADTAFALDVSNSACVPSLTITLEWTGETSDVDLYVVEPGGEVVYFSNRGGDVGFLDNDDTYGFGPENYIIDSALDPAASQVLGEYETYVKLYSGDAATET-WRLTARVSGEVVWIEEGDF 542
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1189.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G5D6_ECTSI4.080e-4738.70Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G3X5_ECTSI3.920e-4439.01VWFD domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 352..463
e-value: 2.7E-5
score: 26.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1189contigA-nodosum_M_contig1189:136417..163809 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1189.7.1mRNA_A-nodosum_M_contig1189.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1189 136324..164503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1189.7.1 ID=prot_A-nodosum_M_contig1189.7.1|Name=mRNA_A-nodosum_M_contig1189.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=505bp
MRVNRNLVALLSSGIIIIRTTSVVTPAPTIAPPEVPENGCPDTSIPSSLE
ISLVWTVDTDLDLHVFEPGGEEVYFGQRLGDVGIVSDDNVGGPGSETYTL
LNGLNIDEDEVLGTYRAWITNGQPGTPWIMTARLAGELQWAISGVIPGGY
SYDYDDYYYDDYSYAFYDDRTFYPVTVTEYTESTCDIDLYGTCPGGSFSD
DGTPPCVVCPNGRFSQEGSSTCSPTALLYIDASDELLAIMEADAIGGFAG
PGYVELDGDNSYIWDRVTLNEEDAGVLEVTGTFERDVDGDASLPSSTALF
VYLELEDESFMRGEGSIDPSTGKFTATVMNVPEGFSKVFYSFVVLDPEET
VVIDDGYGESVFYSDVISITCTSPLTITLEWSTDNSDFDMEITEPDGSSW
YAWDIGTYGFGSGDVTDGFGPEIWTVFPGNPEAVGTYTVRLYFLNAPGDT
EWTLTARVNGEIEWIETGIYEPNNSGFSYSYYSDDSSSSDLFSVTLDSVD
TKEC*
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