prot_A-nodosum_M_contig11813.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11813.1.1
Unique Nameprot_A-nodosum_M_contig11813.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length531
Homology
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A6H5K2P5_9PHAE (HECT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2P5_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 3.760e-76
Identity = 185/412 (44.90%), Postives = 216/412 (52.43%), Query Frame = 0
Query:  127 TNVDVTGGELPNVGATMFEAVQLLMFKHSQETEG-DVPRTSNWDLFKHRSMQVPLEQWGKSITLEFSPRRPKSSPISQVEGVSGAGAGARQSVARREEESASAAPTAPSSISPLPTAETPTTMETQPRGSSNGVGGKRKHLE---------------------------ESRSRPFKVRKGAGMEGSSNSSGGANAGASEGVLVFELPPVLTPGATPLDARLASLRALLEDGG---IGAGFRFGEHMCLLAALQAFCEEWVPLRKRLALKGRV--DDDVPDPHPSVLHDLAKRCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQTKAKNVED-----QPQGSSSGSL----GSPNETMALLGHGGPDDSATPLPELLRQ 496
            T VD T GELP+ GATMFEAVQ+LM KH++ET G +VP TS+ D F HRSM +P EQWGK+ITLEFSPR   S                                                                                                  R R    +KG  +E                  V ELP VL PGATPLDARLA +  L+E GG   IGAGFRFGEH+CLL+ALQA CEEW+ LR+ L   G V  D D+PDPHPSVLHDLA+RC+V+GLQRK    AC+PLALC+GSLPSWCV LP EFP+LFSLETRL+L +KT+ GMAR VAH+Q KAKNVED      P GS++G+     G     +   G   P   A PLPELLRQ
Sbjct: 1187 TEVDFTNGELPS-GATMFEAVQMLMLKHARETAGGEVPITSSGDRFPHRSMPMPREQWGKAITLEFSPRSCSSHSAKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRRDRKGMDKKGKALE------------------VLELPGVLAPGATPLDARLAVVHGLMEKGGGGGIGAGFRFGEHLCLLSALQAVCEEWLGLRRSLVSHGSVAGDGDLPDPHPSVLHDLARRCIVSGLQRK----ACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLGSAAGTARAGGGVLRRVVGADGADSPASLAMPLPELLRQ 1575          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: D7FHF2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHF2_ECTSI)

HSP 1 Score: 132 bits (332), Expect = 3.160e-33
Identity = 72/121 (59.50%), Postives = 87/121 (71.90%), Query Frame = 0
Query:  394 RKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQTKAKNVED-----QPQGSSSGSLGSPNETMALLGHGGPDDS----ATPLPELLRQLGLLGRLTV 505
            R  S+QAC+PLALC+GSLPSWCV LP EFP+LFSLETRL+L +KT+ GMAR VAH+Q KAKNVED      P  S++G+  +    +  +G  G  DS    A PLPELLRQLG LGRLT+
Sbjct:    3 RGYSKQACNPLALCTGSLPSWCVGLPREFPSLFSLETRLSLLRKTAFGMARAVAHVQEKAKNVEDIPAVAAPLRSAAGTARAGGGVLRRVGGAGGADSPASLAMPLPELLRQLGRLGRLTI 123          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: UPI000C1CDF1F (E3 ubiquitin-protein ligase UPL3-like n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CDF1F)

HSP 1 Score: 66.2 bits (160), Expect = 1.280e-7
Identity = 46/142 (32.39%), Postives = 71/142 (50.00%), Query Frame = 0
Query:  316 LDARLASLRALLEDGGIGAGFRFGEHMCLLAALQAFCEEWVPLRKRLALKGRVDDDVPDPHPSV--LHDLA-----KRCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ 450
            L  R++ L ++L+ G +        H+  + AL    E    L  RL ++G VD        S+  L D+      ++ + + L  K++RQ  D LALCSGSLPSWC +L    P LF  ETR   +  T+ G++R +  +Q
Sbjct: 1314 LQHRVSLLDSILQ-GELPCDLEKSNHIYNILALLRVLEGLNQLAPRLRVQGAVDSFAEGKIASLDDLGDIGIKVPPEKFISSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYRLQ 1454          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A0A9GHT8_ARUDO (Hect ubiquitin-protein ligase, putative n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9GHT8_ARUDO)

HSP 1 Score: 64.3 bits (155), Expect = 4.140e-7
Identity = 56/175 (32.00%), Postives = 79/175 (45.14%), Query Frame = 0
Query:  312 GATPLDARLASLRALLEDGGIGA--GFRFGEHMCLLA---------ALQAFCEEWVPLRKRLALKGRVDDDVPDPHPSVLHDLAK--------RCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQTKAKNVEDQPQGSSSGS 467
            G+T L+++  S R++ E  G+         E  C L          AL    E    L  RL ++G   DD  +   S L +L K          V + L  K++RQ  D LALCSGSLPSWC ++    P LF  ETR   +  T+ G++R +  +Q        Q QG + GS
Sbjct:  217 GSTSLNSKSESCRSISEAQGVSLLDSILQAELPCDLERTNSTYNILALLRVLEGLNQLSPRLRVQG-ASDDFAEGKISTLDELYKTGPKVPSEEFVNSKLTPKLARQMQDVLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALNRLQ--------QQQGDNHGS 382          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A6A3C850_HIBSY (HECT-type E3 ubiquitin transferase n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3C850_HIBSY)

HSP 1 Score: 63.9 bits (154), Expect = 6.750e-7
Identity = 37/88 (42.05%), Postives = 49/88 (55.68%), Query Frame = 0
Query:  392 LQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQTKAKNVEDQPQGSSSGSLGSPNETMALLG 479
            L  K++RQ  D LALCSGSLPSWC +L    P LF  ETR   +  T+ G++R + H+Q        Q QG+     GS NE +  +G
Sbjct: 1396 LTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALYHLQ--------QQQGADG--HGSTNERVVRVG 1473          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A5K1H120_9MAGN (HECT domain-containing protein (Fragment) n=16 Tax=Nymphaea colorata TaxID=210225 RepID=A0A5K1H120_9MAGN)

HSP 1 Score: 63.2 bits (152), Expect = 7.350e-7
Identity = 36/88 (40.91%), Postives = 48/88 (54.55%), Query Frame = 0
Query:  392 LQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQTKAKNVEDQPQGSSSGSLGSPNETMALLG 479
            L  K++RQ  DPLALCSGSLPSWC +L    P LF  ETR   +  T+ G++R +  +Q          Q  S+ + GS NE    +G
Sbjct:  285 LTPKLARQIQDPLALCSGSLPSWCYQLTKACPFLFPFETRRQYFYSTAFGLSRALHRLQ----------QQQSADNHGSSNEREVRVG 362          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A6I9RAC6_ELAGV (HECT-type E3 ubiquitin transferase n=3 Tax=Arecaceae TaxID=4710 RepID=A0A6I9RAC6_ELAGV)

HSP 1 Score: 63.2 bits (152), Expect = 1.170e-6
Identity = 34/91 (37.36%), Postives = 50/91 (54.95%), Query Frame = 0
Query:  368 VDDDVPDPHPSVLHDL--------AKRCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ 450
            V DD  +   S L +L        ++  + + L  K++RQ  DPLALCSGSLPSWC ++    P LF  ETR   +  T+ G++R +  +Q
Sbjct: 1357 VSDDFAEGKISSLDELYRAGAKVPSEEFISSKLTPKLARQIQDPLALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGLSRALHRLQ 1447          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A7I8K2Z8_SPIIN (HECT-type E3 ubiquitin transferase n=2 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8K2Z8_SPIIN)

HSP 1 Score: 63.2 bits (152), Expect = 1.170e-6
Identity = 29/59 (49.15%), Postives = 38/59 (64.41%), Query Frame = 0
Query:  392 LQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ 450
            L  K++RQ  D LALCSGSLPSWC +LP   P LF  ETR   +  T+ G++R +  +Q
Sbjct: 1387 LSPKLARQIQDALALCSGSLPSWCYQLPRACPFLFPFETRRDFFYSTAFGLSRALHRLQ 1445          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: A0A2R6RBR7_ACTCC (HECT-type E3 ubiquitin transferase n=1 Tax=Actinidia chinensis var. chinensis TaxID=1590841 RepID=A0A2R6RBR7_ACTCC)

HSP 1 Score: 62.8 bits (151), Expect = 1.540e-6
Identity = 31/73 (42.47%), Postives = 45/73 (61.64%), Query Frame = 0
Query:  378 SVLHDLAKRCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ 450
            SV+   ++  + + L  K++RQ  D LALCSGSLPSWC +L    P LF LETR   +  T+ G++R +  +Q
Sbjct: 1360 SVVRVSSEEFINSKLTPKLARQIQDALALCSGSLPSWCYQLTKACPFLFPLETRRQYFYSTAFGLSRALYRLQ 1432          
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Match: UPI0018AE5215 (E3 ubiquitin-protein ligase UPL3 isoform X1 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE5215)

HSP 1 Score: 62.8 bits (151), Expect = 1.540e-6
Identity = 42/114 (36.84%), Postives = 57/114 (50.00%), Query Frame = 0
Query:  345 LAALQAFCEEWVPLRKRLALKGRVDDDVPDPHPSVLHDLAK--------RCVVAGLQRKVSRQACDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ 450
            + AL    E    L  RL ++  V DD  +   S L DL K          V + L  K++RQ  D LALCSGSLPSWC ++    P LF  ETR   +  T+ G++R +  +Q
Sbjct: 1331 ILALLRVLEGLNQLAPRLRVQA-VSDDFAEGKISTLDDLYKAGAGVPREEFVNSKLTPKLARQIQDALALCSGSLPSWCYQMTKACPFLFPFETRRQYFYSTAFGISRALHRLQ 1443          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11813.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K2P5_9PHAE3.760e-7644.90HECT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FHF2_ECTSI3.160e-3359.50Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
UPI000C1CDF1F1.280e-732.39E3 ubiquitin-protein ligase UPL3-like n=1 Tax=Olea... [more]
A0A0A9GHT8_ARUDO4.140e-732.00Hect ubiquitin-protein ligase, putative n=1 Tax=Ar... [more]
A0A6A3C850_HIBSY6.750e-742.05HECT-type E3 ubiquitin transferase n=1 Tax=Hibiscu... [more]
A0A5K1H120_9MAGN7.350e-740.91HECT domain-containing protein (Fragment) n=16 Tax... [more]
A0A6I9RAC6_ELAGV1.170e-637.36HECT-type E3 ubiquitin transferase n=3 Tax=Arecace... [more]
A0A7I8K2Z8_SPIIN1.170e-649.15HECT-type E3 ubiquitin transferase n=2 Tax=Spirode... [more]
A0A2R6RBR7_ACTCC1.540e-642.47HECT-type E3 ubiquitin transferase n=1 Tax=Actinid... [more]
UPI0018AE52151.540e-636.84E3 ubiquitin-protein ligase UPL3 isoform X1 n=2 Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 260..277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..472
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 454..483
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 57..96
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 191..293
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..105
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..257
NoneNo IPR availablePANTHERPTHR45670:SF1E3 UBIQUITIN-PROTEIN LIGASE TRIP12coord: 37..524
IPR045322E3 ubiquitin-protein ligase HECTD1/TRIP12-likePANTHERPTHR45670E3 UBIQUITIN-PROTEIN LIGASE TRIP12coord: 37..524

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11813contigA-nodosum_M_contig11813:714..8885 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11813.1.1mRNA_A-nodosum_M_contig11813.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11813 714..8885 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11813.1.1 ID=prot_A-nodosum_M_contig11813.1.1|Name=mRNA_A-nodosum_M_contig11813.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=531bp
NEGASDGQRDVSPTRGQPGANSGGGVDGGVAPLGKGQQQSKDRDMTRSET
AADAPSAAAEATSTATEGRPVTRQSSAASSAGGGGSSSSEPTAAATPGRR
SSPARGSVRFPLLQWTLRYNWDAASATNVDVTGGELPNVGATMFEAVQLL
MFKHSQETEGDVPRTSNWDLFKHRSMQVPLEQWGKSITLEFSPRRPKSSP
ISQVEGVSGAGAGARQSVARREEESASAAPTAPSSISPLPTAETPTTMET
QPRGSSNGVGGKRKHLEESRSRPFKVRKGAGMEGSSNSSGGANAGASEGV
LVFELPPVLTPGATPLDARLASLRALLEDGGIGAGFRFGEHMCLLAALQA
FCEEWVPLRKRLALKGRVDDDVPDPHPSVLHDLAKRCVVAGLQRKVSRQA
CDPLALCSGSLPSWCVRLPAEFPTLFSLETRLALYKKTSLGMARVVAHIQ
TKAKNVEDQPQGSSSGSLGSPNETMALLGHGGPDDSATPLPELLRQLGLL
GRLTVLLCRDSIPEMATFLFELLVNGQEQPP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045322HECTD1/TRIP12-like