prot_A-nodosum_M_contig1179.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1179.3.1
Unique Nameprot_A-nodosum_M_contig1179.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length159
Homology
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: D7FSD9_ECTSI (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD9_ECTSI)

HSP 1 Score: 296 bits (757), Expect = 5.450e-101
Identity = 144/158 (91.14%), Postives = 150/158 (94.94%), Query Frame = 0
Query:    1 MLIGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEKIP 158
            MLIGHGFDIHRL  GK+LVIGGV IPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDP WSGA+SS+FMEEAYRRMD RGFRVGNVDVTLILQKPKVMDIKP MR+NIVRLL TS GRVNVKARTHEKVD+VGEGRAMACHVVVLLEK+P
Sbjct:   11 MLIGHGFDIHRLVEGKELVIGGVNIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPDWSGADSSIFMEEAYRRMDERGFRVGNVDVTLILQKPKVMDIKPLMRDNIVRLLRTSLGRVNVKARTHEKVDSVGEGRAMACHVVVLLEKVP 168          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A7S2XZX5_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZX5_9STRA)

HSP 1 Score: 263 bits (672), Expect = 3.620e-87
Identity = 128/155 (82.58%), Postives = 139/155 (89.68%), Query Frame = 0
Query:    2 LIGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 156
            L+GHGFDIHRL  G  LVIGGV IPYELGA+AHSDGDVIYHSVVDAILGAL LPDIGQLFPDNDP+W GA+SSVFMEEAYRRMD  G+ +GNVDVTLILQKPKV DIKP M+ENIVRLL T+  +VNVKARTHEKVD+VGEGR+MACHVVVLL K
Sbjct:   72 LVGHGFDIHRLAPGLPLVIGGVTIPYELGAEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPRWKGADSSVFMEEAYRRMDEAGYTIGNVDVTLILQKPKVKDIKPAMKENIVRLLRTTPSQVNVKARTHEKVDSVGEGRSMACHVVVLLMK 226          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A7R9U3H3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3H3_9STRA)

HSP 1 Score: 258 bits (659), Expect = 1.540e-85
Identity = 121/156 (77.56%), Postives = 140/156 (89.74%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEKIP 158
            IGHGFDIHR+  GK LVIGGV I +ELG +AHSDGDVIYHSVVDAILGAL LPDIGQLFPDNDP+WSGA+SS+FM+EAY+RMD+RG+R+GNVDVTLILQKPKV D KP M++NIV LLHT+  RVNVKARTHEKVD+VGE RA++CHVV +LE+ P
Sbjct:   48 IGHGFDIHRMAPGKKLVIGGVTIDFELGVEAHSDGDVIYHSVVDAILGALTLPDIGQLFPDNDPEWSGADSSIFMKEAYKRMDARGYRIGNVDVTLILQKPKVKDFKPLMKDNIVELLHTTPDRVNVKARTHEKVDSVGESRALSCHVVTILERKP 203          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A835Z8X8_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8X8_9STRA)

HSP 1 Score: 249 bits (635), Expect = 1.740e-82
Identity = 119/152 (78.29%), Postives = 132/152 (86.84%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLL 154
            IGHG+DIHRL  GK LVIGGV IP+E GA+AHSDGDVIYHSVVDAILGAL +PDIGQLFPDNDPQWSG++SS+FMEEAYRRM  RG+ +GNVDVTLILQ+PKV DIKP M +NI RLLH   GRVNVKARTHE VD+VGE RAM CHVV+ L
Sbjct:    5 IGHGYDIHRLAEGKKLVIGGVDIPFEKGAEAHSDGDVIYHSVVDAILGALCMPDIGQLFPDNDPQWSGSDSSIFMEEAYRRMAGRGYEIGNVDVTLILQRPKVRDIKPAMADNIARLLHAPPGRVNVKARTHELVDSVGESRAMECHVVLTL 156          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A7S0SRS3_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SRS3_9STRA)

HSP 1 Score: 247 bits (630), Expect = 4.130e-81
Identity = 116/155 (74.84%), Postives = 132/155 (85.16%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEKI 157
            IGHGFDIHRL  G  LVIGGV IPY LGADAHSDGD +YH VVDAILGAL LPDIGQ+FPDNDP+W GA+SS+FM EAY RM  RG+R+ N+DVTLILQ PKV DIKP M+ENIV+LLHT+  RVN+KARTHEKVD++GE ++ ACH VVLLEKI
Sbjct:   49 IGHGFDIHRLIEGTKLVIGGVTIPYHLGADAHSDGDALYHCVVDAILGALNLPDIGQIFPDNDPKWKGADSSIFMIEAYNRMIERGYRISNLDVTLILQSPKVKDIKPSMKENIVKLLHTADNRVNIKARTHEKVDSIGESKSYACHAVVLLEKI 203          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A7S2WW46_9STRA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW46_9STRA)

HSP 1 Score: 246 bits (627), Expect = 2.010e-80
Identity = 117/154 (75.97%), Postives = 133/154 (86.36%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 156
            IGHG+DIHRL  G  LVIGGV I YELG +AHSDGDV++HSVVDAI GALGLPDIGQ FPD DP+W GA+S VFMEEAY +M +RG+ +GNVDVTLILQKPKVMDIKP+M++NIVRLL TS  RVNVKARTHEKVD+VGE RA+ CHVV+ LEK
Sbjct:   65 IGHGYDIHRLAPGLPLVIGGVDIDYELGTEAHSDGDVVFHSVVDAIFGALGLPDIGQFFPDTDPRWKGASSDVFMEEAYNQMVARGYHIGNVDVTLILQKPKVMDIKPKMKDNIVRLLRTSESRVNVKARTHEKVDSVGECRALECHVVLTLEK 218          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A7S0GXU7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0GXU7_9EUKA)

HSP 1 Score: 238 bits (607), Expect = 2.140e-77
Identity = 115/156 (73.72%), Postives = 130/156 (83.33%), Query Frame = 0
Query:    1 MLIGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 156
            M IGHG+DIHRL  G  L IGGV IP+E G  AHSDGDV+YHS+ DAILGA+G+PDIGQLFPDNDPQW GA S  FM EAYR M  RG+++GNVDVTLILQKPKV DIKP M+ENIV+LL+T A RVN+KARTHE VD+VGE RA+ACH VVLLEK
Sbjct:   63 MRIGHGWDIHRLEDGLTLTIGGVVIPFEKGTVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDNDPQWKGAASHQFMTEAYRLMKERGYQIGNVDVTLILQKPKVKDIKPEMKENIVKLLNTDASRVNIKARTHENVDSVGEVRALACHSVVLLEK 218          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: K8YUB0_NANGC (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YUB0_NANGC)

HSP 1 Score: 229 bits (583), Expect = 1.940e-73
Identity = 110/155 (70.97%), Postives = 127/155 (81.94%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEKI 157
            IGHGFDIHRL AG  LVIGGVKI +E G+ AHSDGD +YHSV DAILGA+GLPDIGQLFPD DP+W GA+S+ FM EA R M  RG+R+GNVDVTLILQKPKV DIKP+M+ N+V LL T   RVN+KARTHE VD+VGE R+   HVV+LLEK+
Sbjct:   87 IGHGFDIHRLEAGLPLVIGGVKIEFEKGSAAHSDGDALYHSVTDAILGAIGLPDIGQLFPDTDPKWKGADSAQFMREARRLMTLRGYRIGNVDVTLILQKPKVKDIKPQMKANLVELLGTEESRVNIKARTHEHVDSVGESRSWVVHVVILLEKV 241          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A6V3M8V7_9EUKA (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3M8V7_9EUKA)

HSP 1 Score: 229 bits (584), Expect = 2.670e-73
Identity = 110/156 (70.51%), Postives = 129/156 (82.69%), Query Frame = 0
Query:    3 IGHGFDIHRLT--AGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEK 156
            IGHG+DIHRL   +G  L IGGV IP+E G  AHSDGDV+YHS+ DAILGA+G+PDIGQLFPD DP+W GA S VF+ E++R M  RG+R+GNVD+TLILQKPKV DIKP M ENIV+LLHT   RVN+KARTHEKVD+VGE RA+ACH VVLLE+
Sbjct:  106 IGHGWDIHRLEEDSGAPLTIGGVVIPFEKGIVAHSDGDVLYHSLTDAILGAIGMPDIGQLFPDTDPRWKGAASHVFLTESHRLMTERGYRIGNVDITLILQKPKVKDIKPEMAENIVKLLHTHPSRVNIKARTHEKVDSVGEVRALACHAVVLLER 261          
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Match: A0A0G4H9P7_9ALVE (2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4H9P7_9ALVE)

HSP 1 Score: 226 bits (577), Expect = 9.160e-73
Identity = 105/156 (67.31%), Postives = 124/156 (79.49%), Query Frame = 0
Query:    3 IGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILGALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLILQKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHVVVLLEKIP 158
            +GHG+DIHRL  G  L IGG+ IPYE G +AHSDGDV++HS+ DAI GAL LPDIGQ FPD DP+W GA S VFMEEA+R+MD RG+R+GN DVTLIL++PKV D KP+M + I  LL     RVNVKARTHEKVD+VGE RA+ CHVVV+LEK P
Sbjct:   69 VGHGYDIHRLAPGLTLTIGGIDIPYEKGTEAHSDGDVVFHSLCDAIFGALSLPDIGQQFPDTDPRWKGAASCVFMEEAFRQMDERGYRIGNADVTLILERPKVKDFKPKMVDRICELLRAPHSRVNVKARTHEKVDSVGESRALECHVVVVLEKKP 224          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1179.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSD9_ECTSI5.450e-10191.142-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2XZX5_9STRA3.620e-8782.582-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7R9U3H3_9STRA1.540e-8577.562-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A835Z8X8_9STRA1.740e-8278.292-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0SRS3_9STRA4.130e-8174.842-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S2WW46_9STRA2.010e-8075.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A7S0GXU7_9EUKA2.140e-7773.722-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
K8YUB0_NANGC1.940e-7370.972-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A6V3M8V7_9EUKA2.670e-7370.512-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]
A0A0G4H9P7_9ALVE9.160e-7367.312-C-methyl-D-erythritol 2,4-cyclodiphosphate synth... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilyGENE3D3.30.1330.50coord: 1..157
e-value: 1.0E-65
score: 222.8
IPR0365712-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamilySUPERFAMILY69765IpsF-likecoord: 2..156
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePFAMPF02542YgbBcoord: 1..155
e-value: 7.6E-58
score: 195.2
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseTIGRFAMTIGR00151TIGR00151coord: 3..156
e-value: 2.9E-55
score: 184.6
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthasePANTHERPTHR431812-C-METHYL-D-ERYTHRITOL 2,4-CYCLODIPHOSPHATE SYNTHASE, CHLOROPLASTICcoord: 3..156
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseHAMAPMF_00107IspFcoord: 1..156
score: 31.257284
IPR0035262-C-methyl-D-erythritol 2,4-cyclodiphosphate synthaseCDDcd00554MECDP_synthasecoord: 3..154
e-value: 4.25038E-76
score: 221.935
IPR0205552-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved sitePROSITEPS01350ISPFcoord: 35..50

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1179contigA-nodosum_M_contig1179:13827..16070 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1179.3.1mRNA_A-nodosum_M_contig1179.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1179 13441..16083 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1179.3.1 ID=prot_A-nodosum_M_contig1179.3.1|Name=mRNA_A-nodosum_M_contig1179.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=159bp
MLIGHGFDIHRLTAGKDLVIGGVKIPYELGADAHSDGDVIYHSVVDAILG
ALGLPDIGQLFPDNDPQWSGANSSVFMEEAYRRMDSRGFRVGNVDVTLIL
QKPKVMDIKPRMRENIVRLLHTSAGRVNVKARTHEKVDAVGEGRAMACHV
VVLLEKIP*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036571MECDP_synthase_sf
IPR003526MECDP_synthase
IPR020555MECDP_synthase_CS