prot_A-nodosum_M_contig1175.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1175.3.1
Unique Nameprot_A-nodosum_M_contig1175.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length197
Homology
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: D8LIW3_ECTSI (RAC, RHO family GTPase n=3 Tax=Phaeophyceae TaxID=2870 RepID=D8LIW3_ECTSI)

HSP 1 Score: 390 bits (1002), Expect = 3.020e-137
Identity = 189/196 (96.43%), Postives = 192/196 (97.96%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVIS 196
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQ HAPGIPFILVGTKLDLRDDQDA KRLAERRQTPISFSEAQ LAS+L+AYRYLECSALTQHGLKQVFDGAIRCVLE+NQRKMKKKKGKK CVIS
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQSHAPGIPFILVGTKLDLRDDQDACKRLAERRQTPISFSEAQALASELDAYRYLECSALTQHGLKQVFDGAIRCVLERNQRKMKKKKGKKNCVIS 196          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A835Z467_9STRA (Rho family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z467_9STRA)

HSP 1 Score: 324 bits (830), Expect = 4.660e-111
Identity = 156/182 (85.71%), Postives = 165/182 (90.66%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQR 182
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVD TSF NVKLKWIPELQHHA G+PFILVGTK+DLR+D  A++ LAERRQ PISF+EAQ LA++L AYRY+ECSALTQ GLK VFDGAI     Q QR
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDTTSFQNVKLKWIPELQHHAAGVPFILVGTKMDLRNDSKALRSLAERRQQPISFNEAQNLANELGAYRYMECSALTQQGLKHVFDGAISPPHSQQQR 182          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: F0Y6L3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y6L3_AURAN)

HSP 1 Score: 313 bits (802), Expect = 8.300e-107
Identity = 147/195 (75.38%), Postives = 169/195 (86.67%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVI 195
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+ +P SF N++ KW PE+ HHAPG+PFILVGTKLDLR+D D I RL ++R+ P++  E + LA++L AY+Y+ECSALTQ GLK VFD AIRCV++  Q+K KKK   K CV+
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITNPNSFENIRTKWYPEINHHAPGVPFILVGTKLDLRNDPDTIARLQQKRRAPVNTEEGEALANELNAYKYIECSALTQQGLKGVFDDAIRCVID-TQKKPKKKS--KRCVL 192          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A485LAI3_9STRA (Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A485LAI3_9STRA)

HSP 1 Score: 311 bits (797), Expect = 5.510e-106
Identity = 149/197 (75.63%), Postives = 168/197 (85.28%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLE--QNQRKMKKKKGKKGCVI 195
            MQN+KCVVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KP+NLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPGIPFILVGTKLDLRDD++ I+RL E+R  PI+  + + L ++L AY+YLECSAL Q GLKQVFD  IRCVL+  +N +K  +K G  GC I
Sbjct:    1 MQNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWFPEIQHHAPGIPFILVGTKLDLRDDEETIERLKEKRLKPITTEQGEALKNELGAYKYLECSALNQKGLKQVFDEGIRCVLQHQKNPKKSTRKFGS-GCSI 196          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A067CJ94_SAPPC (Ras-like protein Rac1 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJ94_SAPPC)

HSP 1 Score: 310 bits (795), Expect = 1.040e-105
Identity = 144/188 (76.60%), Postives = 166/188 (88.30%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKK 188
            MQN+KCVVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KP+NLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPG+PFILVGTKLDLR+D+D ++RL E+R  P++    + L ++L A++YLECSALTQ GLKQVFD +IRCVL Q+Q+  KKK+
Sbjct:    3 MQNMKCVVVGDGAVGKTCVLISYTTNAFPGEYIPTVFDNYSANVMVDAKPVNLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVSPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLREDEDTVERLKEKRSAPVTHEMGEALKNELGAFKYLECSALTQKGLKQVFDESIRCVL-QHQKNPKKKR 189          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A1B3SNZ7_9STRA (Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 RepID=A0A1B3SNZ7_9STRA)

HSP 1 Score: 307 bits (787), Expect = 1.600e-104
Identity = 145/185 (78.38%), Postives = 161/185 (87.03%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMK 185
            MQNIK VVVGDGAVGKTC+LISYTTNAFPGEYIPTVFDNYSANVMVD KPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFSVV P SF NVK KW PE+QHHAPG+PFILVGTKLDLRDD++ I+RL E+R +PI+  + + L S+L AY+YLECSALTQ GLKQVFD AIRCV+    +  K
Sbjct:    1 MQNIKNVVVGDGAVGKTCILISYTTNAFPGEYIPTVFDNYSANVMVDSKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSVVRPASFENVKAKWYPEIQHHAPGVPFILVGTKLDLRDDEETIERLREKRLSPITPEQGEALRSELGAYKYLECSALTQKGLKQVFDEAIRCVIAHQSKPAK 185          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: E3KBN7_PUCGT (Ras-like C3 botulinum toxin substrate 1 n=15 Tax=Opisthokonta TaxID=33154 RepID=E3KBN7_PUCGT)

HSP 1 Score: 307 bits (787), Expect = 1.780e-104
Identity = 148/195 (75.90%), Postives = 162/195 (83.08%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVI 195
            MQ+IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+  P SF NV+ KW PE+ HHAP IP ILVGTKLDLR+D   I++L ERR  PIS+ +A G+A D+ A RYLECSALTQ GLK VFD AIR VL    R+   KK  KGC+I
Sbjct:    1 MQSIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLTSPPSFENVRTKWYPEICHHAPNIPLILVGTKLDLREDPLTIEKLRERRMVPISYQQAAGMARDIAAVRYLECSALTQKGLKNVFDEAIRAVLAPAPREKTTKKQSKGCMI 195          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A8J2S6J5_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S6J5_9STRA)

HSP 1 Score: 305 bits (781), Expect = 1.310e-103
Identity = 143/196 (72.96%), Postives = 167/196 (85.20%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVIS 196
            MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDG+PINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+ +PTSF NV+ KW PE+  HAPG+PFILVGTKLDLR+D + + RL ++R+ P++  +   LA +L AY+Y+ECSALTQ GLK VFD +IRCVL+  +   K KK KK CV++
Sbjct:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGRPINLGLWDTAGQEDYDRLRPLSYPQTDVFLLCFSITNPTSFENVRTKWYPEIASHAPGVPFILVGTKLDLRNDPETVARLQQKRRMPVNSEDGMQLARELGAYKYIECSALTQQGLKGVFDDSIRCVLDAMK---KPKKKKKKCVVA 193          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: A0A177UYL8_9BASI (Uncharacterized protein n=2 Tax=Tilletia TaxID=13289 RepID=A0A177UYL8_9BASI)

HSP 1 Score: 301 bits (772), Expect = 3.080e-102
Identity = 146/195 (74.87%), Postives = 162/195 (83.08%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVI 195
            MQ IKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP++LGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+V P SF NV+ KW PE+ HHAP IP ILVGTKLDLR+D+D I +LAERR  P+S+++   +A D+ A RYLECSALTQ GLK VFD AIRCVL     K +KK     CVI
Sbjct:    1 MQTIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSPPSFENVRTKWWPEICHHAPHIPMILVGTKLDLREDRDEINKLAERRMQPLSYAQGNAMARDIGAVRYLECSALTQKGLKGVFDEAIRCVLAPAPIKTRKKNN---CVI 192          
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Match: K3XBT2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBT2_GLOUD)

HSP 1 Score: 301 bits (772), Expect = 3.310e-102
Identity = 139/190 (73.16%), Postives = 164/190 (86.32%), Query Frame = 0
Query:    1 MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPELQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLEAYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGK 190
            MQN+KCVVVGDGAVGKTC+LISYTTN+FPGEYIPTVFDNYSA+VMVD KPINLGLWDTAGQEDYDRLRPLSYPQTDVFL+CFS+V   SF NVK KW+PE++HHAPG+PFILVGTKLDLRDD D +++L E++ TPI+  + + L ++L A++YLECSALTQ GLKQVFD  IRCVL   Q    +++GK
Sbjct:    1 MQNMKCVVVGDGAVGKTCVLISYTTNSFPGEYIPTVFDNYSAHVMVDLKPINLGLWDTAGQEDYDRLRPLSYPQTDVFLICFSLVSRASFENVKSKWLPEIRHHAPGVPFILVGTKLDLRDDHDTLEKLREKKMTPITTEQGESLKNELGAFKYLECSALTQKGLKQVFDEGIRCVLTNQQNPKGRQRGK 190          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1175.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIW3_ECTSI3.020e-13796.43RAC, RHO family GTPase n=3 Tax=Phaeophyceae TaxID=... [more]
A0A835Z467_9STRA4.660e-11185.71Rho family GTPase n=1 Tax=Tribonema minus TaxID=30... [more]
F0Y6L3_AURAN8.300e-10775.38Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A485LAI3_9STRA5.510e-10675.63Aste57867_18068 protein n=6 Tax=Aphanomyces TaxID=... [more]
A0A067CJ94_SAPPC1.040e-10576.60Ras-like protein Rac1 n=4 Tax=Saprolegniaceae TaxI... [more]
A0A1B3SNZ7_9STRA1.600e-10478.38Rac1 n=1 Tax=Eurychasma dicksonii TaxID=159317 Rep... [more]
E3KBN7_PUCGT1.780e-10475.90Ras-like C3 botulinum toxin substrate 1 n=15 Tax=O... [more]
A0A8J2S6J5_9STRA1.310e-10372.96Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A177UYL8_9BASI3.080e-10274.87Uncharacterized protein n=2 Tax=Tilletia TaxID=132... [more]
K3XBT2_GLOUD3.310e-10273.16Uncharacterized protein n=1 Tax=Globisporangium ul... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 4..25
score: 49.32
coord: 27..43
score: 30.58
coord: 44..66
score: 50.07
coord: 154..176
score: 30.83
coord: 106..119
score: 48.47
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 1..179
e-value: 3.3E-16
score: 69.9
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 4..179
e-value: 2.9E-17
score: 73.3
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 9..194
e-value: 0.0058
score: -5.8
NoneNo IPR availablePANTHERPTHR24072:SF291SUBFAMILY NOT NAMEDcoord: 1..188
NoneNo IPR availablePROSITEPS51420RHOcoord: 1..176
score: 26.706619
NoneNo IPR availablePROSITEPS51419RABcoord: 1..196
score: 19.321104
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 6..179
e-value: 2.4E-123
score: 425.7
IPR001806Small GTPasePFAMPF00071Rascoord: 5..176
e-value: 8.9E-54
score: 181.4
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..195
score: 15.809977
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..181
e-value: 6.8E-74
score: 249.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..177
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 1..157
e-value: 2.2E-38
score: 129.6
IPR003578Small GTPase RhoPANTHERPTHR24072RHO FAMILY GTPASEcoord: 1..188

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1175contigA-nodosum_M_contig1175:41550..50677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1175.3.1mRNA_A-nodosum_M_contig1175.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1175 41351..53618 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1175.3.1 ID=prot_A-nodosum_M_contig1175.3.1|Name=mRNA_A-nodosum_M_contig1175.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=197bp
MQNIKCVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKP
INLGLWDTAGQEDYDRLRPLSYPQTDVFLVCFSVVDPTSFHNVKLKWIPE
LQHHAPGIPFILVGTKLDLRDDQDAIKRLAERRQTPISFSEAQGLASDLE
AYRYLECSALTQHGLKQVFDGAIRCVLEQNQRKMKKKKGKKGCVIS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom
IPR003578Small_GTPase_Rho