prot_A-nodosum_M_contig117.53.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig117.53.1
Unique Nameprot_A-nodosum_M_contig117.53.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1038
Homology
BLAST of mRNA_A-nodosum_M_contig117.53.1 vs. uniprot
Match: D8LJC7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC7_ECTSI)

HSP 1 Score: 551 bits (1419), Expect = 1.390e-175
Identity = 425/1168 (36.39%), Postives = 565/1168 (48.37%), Query Frame = 0
Query:   20 FRLKPRKNVGKQQTALEGE-----DSCLTLTLPPSYPGENEWLRVARTEGLRECLEIIKTCTEESIFEASKGCIGEVSNFISGWRFGEDLGRIGKGMGKNDLVPLAVVNAGLHLGDREAAVDHIRKGLSMGDSS----DCPKVVAVLRWYDGNTVESALSKITRQ-CLAYGSGGQSRLPLFMDNLQEWYDSNFRPHPASTVSLRSASSPSSSSTHPTAGTNGDHDAYSGDLGREKGMEDDVPSRDVSAYGVSKCNLDSLRASSAQRDLGGAARKQPAVVIMLEDVERLNKQVLRELMAVLAQPPCSAPSATSGVRSRVRGRSTSGGKAKAQSISGRPRCGRGFPLAIVAIASAGVGFPLDRLSQSTARQLSLEEFQFPSAEACVDILYRKLFIKGRLPIWLGPKVLTWMKTSFRDSHHSLGTLSRQLQRAALEHFRRPGSYLCLRYCRPWLQRYPLYQDFPRQATQFFSQKLKRDSARMPRDKLQ-SLLGVPVPAPELKELEKEEAVEAAAEEGRTKISANQAERLMEEALHRQACNALRLWFLHEVLTVLANTFGGERFSRD-----------KGRLFGGRGDSDETELLELLKFNARPVRVVADV-------FSRKDQRA-KELKKVAEAFSFLSPTAVSKLLGRLLDSLRHLPPLTEKKEG------------------ASTVTATVTTDTV----------------------------VSNRRVSGGDERTVSERNGQQGGDERSAYQQPPR-----------------GVPPCVEGLDREEACYLRRGAERLLTLWGKANAEGWAEPCSGDSSLAISTVVKNSRLGSDRSSNS-------KTIISRGSRFLSSALHQTTPVGSMPHSAFVSDAGERDAPGTVEKSGGNAGGSSTKTTEGVIAREALPEVDNDEREKALMRACLVREMQLLFLHVMGEARDCALGPGMEPPPPLPKDASVLGEAFCFNEPHE--LQASLCPLMRAQVDKGMMDGAGLGTSENSRKRKEMSEDHLISDACLMYSRYTGQGKIIPRSEWFASF-KDSVREAEPV---------------------------------------------DEESVVCPTAPAEVRVRFDHACQELAMMGYVKPSKKKRKGQE-------EGPGPKGAVARLVYNYT 1032
            FR++ R   G     +E +      S  + +LPP YPGE E +R+ARTEGLRECL I+K C EE++ EA   CI  VS+FI+GWRF +  G   K +G++DLVPLAVV+AGL LGDR +AV H+++GL  G+        P+VVAVLR  D  TVE+A  +I RQ C A G G +SR PLFMD L+EWY S              A S S+S+  P+    G  D  + D  R        P R V+A                             VV++LEDVE  +KQVLR+L+ VLAQPPC         +SR   R T G   +           R  PLA+VAIASA VGFP+DRLS S  RQLS E F FPS+  C+D+LY KLF++ RLP+W+G ++L+WMKT+F D+H SLG  SRQ+  AA  HF RP SYLCL++CRPWL R  L  + P +A      KL RDS  MP + LQ SL GVP                        ++   QA  L+E+ L R+A  ALR+WF H+V +VL  +  G     +            GR  GG  +     L ++     R V++ + V        S+K +R   ELK+V+EA ++L P  V  LL  LL   R LP   ++                     +  ++AT  +D                              +S +  S G               ++S+ ++PP                    P  V+GLDR EA YLRRGAER+L  WG+A  EGWAEP         ST   N+   S  +          K+  SRG+R  SS   Q  P GS              AP   E                          DN ++ +AL RACLVRE+QLLFLHVMGEAR  +LGPGM PPPPL +  SVL EA+C +E  +  +++SLCPL RA VD GMM+GA  G+S    +R+ MSE+  + D C +YS Y G GK I RS+WF  F K++++    +                                             DEE  + PT  AE+  RF+HA  +LA MGYV+P K++++          + PGPKG+V RLV++YT
Sbjct:   22 FRIRTRPPTGPDMMEVEDDRHPKMSSLHSASLPPCYPGELEEVRLARTEGLRECLSIVKECGEEAVKEAGTDCIRSVSDFIAGWRFRDGDGGGAKHVGESDLVPLAVVDAGLQLGDRRSAVQHMKEGLERGNGELGGRRRPQVVAVLRAQDCRTVEAAFKQILRQKCHARG-GARSRRPLFMDALEEWYGS-------------CAISSSTSTWEPSGEEEGGEDGTAVDGAR-------APGRRVAAXXXXXXXXG-------------------PVVVLLEDVEGFDKQVLRDLLNVLAQPPC---------KSRRVQRKTGGTVNRLXXXXXXXX--RTLPLALVAIASARVGFPMDRLSPSAVRQLSPENFYFPSSVECIDLLYEKLFVQRRLPVWMGGRLLSWMKTTFDDTHLSLGMFSRQVIMAAFLHFNRPASYLCLQHCRPWLWRSSL-SNCPVEAMTHMKYKLARDSKSMPANTLQASLPGVPA-----------------------RLDPQQAAGLIEKGLRREASMALRVWFFHKVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREGAGAGL-DVGTMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLRELL---RALPSANQRAAXXXXXXXXXXXXXXXXXXXSGAISATTGSDDASTDDRSPELSGSTSPXXXXXXXXXXXXEISLKTTSPGPSSEXXXXXXXXXXGKKSSQERPPTISQERPAENSRDFSSSPTAPLVVQGLDRTEADYLRRGAERVLGQWGRAEQEGWAEPDDNTIEWGRSTSYLNTCATSGGTXXXXXXXXXXKSAGSRGNRLFSSRSRQ--PAGSE----------NGGAPSNAE--------------------------DNQDQREALNRACLVRELQLLFLHVMGEARAASLGPGMVPPPPLAEHTSVLAEAYCCDEKEKDAIESSLCPLARANVDLGMMEGACKGSSRVILQRRSMSEEIPVLDLCALYSCYRGHGKTIDRSDWFLDFRKEALKHKTRIPAAAKATAPSTGGKTKXXXXXXXXXXXXXXXXXXXXXXXXXXXVPDEEGAIDPTGGAELLARFEHASDQLASMGYVRPLKRRKRAXXXXXXXXXQAPGPKGSVTRLVFSYT 1072          
BLAST of mRNA_A-nodosum_M_contig117.53.1 vs. uniprot
Match: A0A6H5JMQ2_9PHAE (ORC3_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ2_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 7.550e-115
Identity = 306/823 (37.18%), Postives = 396/823 (48.12%), Query Frame = 0
Query:    5 GGGGAAPTVQGTAAPFRLKPRKNVGKQQTALEGE-----DSCLTLTLPPSYPGENEWLRVARTEGLRECLEIIKTCTEESIFEASKGCIGEVSNFISGWRFGEDLGRIGKGMGKNDLVPLAVVNAGLHLGDREAAVDHIRKGLSMGDSS----DCPKVVAVLRWYDGNTVESALSKITRQCLAYGSGGQSRLPLFMDNLQEWYDSNFRPHPASTVSLRSASSPSSSSTHPTAGTNGDHDAYSGDLGREKGMEDDVPSRDVSAYGVSKCNLDSLRASSAQRDLGGAARKQPAVVIMLEDVERLNKQVLRELMAVLAQPPCSAPSATSGVRSRVRGRSTSGGKAKAQSISGRPRCGRGFPLAIVAIASAGVGFPLDRLSQSTARQLSLEEFQFPSAEACVDILYRKLFIKGRLPIWLGPKVLTWMKTSFRDSHHSLGTLSRQLQRAALEHFRRPGSYLCLRYCRPWLQRYPLYQDFPRQATQFFSQKLKRDSARMPRDKLQ-SLLGVPVPAPELKELEKEEAVEAAAEEGRTKISANQAERLMEEALHRQACNALRLWFLHEVLTVLANTFGGE---------------RFSRDKGRLFGGRGDSDETELLELLKFNARPVRVVADVFSRKDQRA--KELKKVAEAFSFLSPTAVSKLLGRLLDSLRHLPPLTEKKEGASTVT---ATVTTDT-------------------------------------------VVSNRRVSGG--DERTVSER--NGQQGGDERSAY--QQPPRG----------VPPCVEGLDREEACYLRRGAERLLTLWGKANAEGWAE 738
            GGGG AP        FR++ R   G      E +      S  +  LPP YPGE E +R+ARTEGLRECL I+K C EE++ EA   CI  VS +I+GWRF +  G   K +G++DLVPLAVV+AGL LGDR +AV HI++GL  GD        P+VVAVLR  D +TVE+A  +I RQC A G G +SR PLFMD L+EWY S               + PSS+ST  T+  +G+                                                      VV++LEDVE  +KQVLR+L+ VLAQPPC +         RV+GR+  GG    +            P+A+VAIASA VGFP+DRLS S  RQLS E F FPS+  CVD+LY KLF++ RLP+W+G ++L+WMK +F D+H SLG  SRQ+  AA  HF RP SYLCL++CRPWL R  +  + P +A      KL RDS  MP   LQ SL GVP                        ++   QA  L+E+ L R+A  ALRLWF H+V  VL  +  G                R  R  G   G     D   + +        VR++  + + K  R    ELK+V+EA ++L P  V  LL  LL +L    P  ++   +S  T   AT   D                                             +S +  S G   ER+ + R  +G++   ERS    Q+   G           P  V GLDR EA YLRRGAER+L  WG+A  EGWAE
Sbjct:   13 GGGGQAPQQ------FRIRTRPPTGPGMMEFEDDRQPKMSSLHSAILPPCYPGELEEVRLARTEGLRECLNIVKECVEEAVKEAGTDCIRSVSGYIAGWRFRDGEGGGAKHVGESDLVPLAVVDAGLQLGDRRSAVQHIKEGLERGDGELGGRRRPQVVAVLRAQDCSTVEAAFKQILRQCHARG-GTRSRRPLFMDALEEWYSS--------------CAIPSSTSTS-TSKCSGE----------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVVVLLEDVEGFDKQVLRDLLNVLAQPPCKSR--------RVQGRT--GGTVN-RXXXXXXXXXXTLPMALVAIASARVGFPMDRLSPSAVRQLSPENFHFPSSVECVDLLYEKLFVQRRLPVWMGGRLLSWMKATFDDTHLSLGMFSRQVIVAAFLHFNRPASYLCLQHCRPWLWRSSV-SNCPVEAMTHMKYKLARDSKSMPPKTLQASLPGVPA-----------------------RLDPQQAAGLIEKGLRREASRALRLWFFHKVWNVLLKSLEGRENPVELLRMTDAVLGRPGRQGGPREGAGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLHELLCAL----PSADQSSASSAATDPRATAAADADGESGAISNTTGSDYALTDGRSPERSGSTSPERFAEXXXXTCPEISRKTTSPGPASERSPTRREISGKKASQERSPTLSQELSAGNSRDFCSSPTAPLVVHGLDRMEADYLRRGAERVLGQWGRAEKEGWAE 752          
BLAST of mRNA_A-nodosum_M_contig117.53.1 vs. uniprot
Match: A0A6H5JMB7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB7_9PHAE)

HSP 1 Score: 105 bits (261), Expect = 2.160e-22
Identity = 58/96 (60.42%), Postives = 69/96 (71.88%), Query Frame = 0
Query:  829 EALPEVDNDEREKALMRACLVREMQLLFLHVMGEARDCALGPGMEPPPPLPKDASVLGEAFCFNEPHE--LQASLCPLMRAQVDKGMMDGAGLGTS 922
            E L  +    RE AL RACLVRE+QLLFLHVMGEAR  +LGPGM  PPPL + A VL EA+C N+  +  L++SLCPL RA VD GMM+GA  G+S
Sbjct:   30 EGLRRMQQKIRE-ALNRACLVRELQLLFLHVMGEARAVSLGPGMVTPPPLAEHAPVLAEAYCCNDKDKEALESSLCPLARANVDLGMMEGACKGSS 124          
BLAST of mRNA_A-nodosum_M_contig117.53.1 vs. uniprot
Match: A0A6H5JQX5_9PHAE (ORC_WH_C domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQX5_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.770e-12
Identity = 54/172 (31.40%), Postives = 72/172 (41.86%), Query Frame = 0
Query:  931 MSEDHLISDACLMYSRYTGQGKIIPRSEWFASF---------------------------KDSVR-------------------EAEP------------------VDEESVVCPTAPAEVRVRFDHACQELAMMGYVKPSKKKRKGQEEG------PGPKGAVARLVYNYT 1032
            MSE+  + D C +YS Y G GK I RS+WF  F                           K S R                   +A P                   DEE  + PT  AE+  RF+HA  +LA MGYV+P K++++ + EG      PGPKG+V RLV++YT
Sbjct:    1 MSEEIPVLDLCALYSCYRGHGKTIDRSDWFLDFRKEALKHKTRIPPAAKATAPSKGGKNKKQSFRPREIPGELGAYSGVSHVFVQAAPGGAGGAGVQTSSAAGGGVPDEEGAIDPTGGAELLARFEHASDQLASMGYVRPLKRRKRPEAEGAGKGQAPGPKGSVTRLVFSYT 172          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig117.53.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LJC7_ECTSI1.390e-17536.39Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMQ2_9PHAE7.550e-11537.18ORC3_N domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JMB7_9PHAE2.160e-2260.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQX5_9PHAE2.770e-1231.40ORC_WH_C domain-containing protein n=1 Tax=Ectocar... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 291..311
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..693
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 671..704
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 795..818
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..251
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..230
IPR045667Origin recognition complex subunit 3, N-terminalPFAMPF07034ORC3_Ncoord: 371..446
e-value: 4.8E-7
score: 29.2
coord: 76..311
e-value: 9.1E-7
score: 28.3
IPR020795Origin recognition complex, subunit 3PANTHERPTHR12748ORIGIN RECOGNITION COMPLEX SUBUNIT 3coord: 43..493
coord: 885..1011

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig117contigA-nodosum_M_contig117:794807..837735 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig117.53.1mRNA_A-nodosum_M_contig117.53.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig117 793744..838886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig117.53.1 ID=prot_A-nodosum_M_contig117.53.1|Name=mRNA_A-nodosum_M_contig117.53.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1038bp
MEKDGGGGAAPTVQGTAAPFRLKPRKNVGKQQTALEGEDSCLTLTLPPSY
PGENEWLRVARTEGLRECLEIIKTCTEESIFEASKGCIGEVSNFISGWRF
GEDLGRIGKGMGKNDLVPLAVVNAGLHLGDREAAVDHIRKGLSMGDSSDC
PKVVAVLRWYDGNTVESALSKITRQCLAYGSGGQSRLPLFMDNLQEWYDS
NFRPHPASTVSLRSASSPSSSSTHPTAGTNGDHDAYSGDLGREKGMEDDV
PSRDVSAYGVSKCNLDSLRASSAQRDLGGAARKQPAVVIMLEDVERLNKQ
VLRELMAVLAQPPCSAPSATSGVRSRVRGRSTSGGKAKAQSISGRPRCGR
GFPLAIVAIASAGVGFPLDRLSQSTARQLSLEEFQFPSAEACVDILYRKL
FIKGRLPIWLGPKVLTWMKTSFRDSHHSLGTLSRQLQRAALEHFRRPGSY
LCLRYCRPWLQRYPLYQDFPRQATQFFSQKLKRDSARMPRDKLQSLLGVP
VPAPELKELEKEEAVEAAAEEGRTKISANQAERLMEEALHRQACNALRLW
FLHEVLTVLANTFGGERFSRDKGRLFGGRGDSDETELLELLKFNARPVRV
VADVFSRKDQRAKELKKVAEAFSFLSPTAVSKLLGRLLDSLRHLPPLTEK
KEGASTVTATVTTDTVVSNRRVSGGDERTVSERNGQQGGDERSAYQQPPR
GVPPCVEGLDREEACYLRRGAERLLTLWGKANAEGWAEPCSGDSSLAIST
VVKNSRLGSDRSSNSKTIISRGSRFLSSALHQTTPVGSMPHSAFVSDAGE
RDAPGTVEKSGGNAGGSSTKTTEGVIAREALPEVDNDEREKALMRACLVR
EMQLLFLHVMGEARDCALGPGMEPPPPLPKDASVLGEAFCFNEPHELQAS
LCPLMRAQVDKGMMDGAGLGTSENSRKRKEMSEDHLISDACLMYSRYTGQ
GKIIPRSEWFASFKDSVREAEPVDEESVVCPTAPAEVRVRFDHACQELAM
MGYVKPSKKKRKGQEEGPGPKGAVARLVYNYTSLVEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045667ORC3_N
IPR020795ORC3