prot_A-nodosum_M_contig117.51.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig117.51.1
Unique Nameprot_A-nodosum_M_contig117.51.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1025
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig117.51.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 271..582
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 530..564
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 197..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..653
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 874..899
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 777..806
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 400..424
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 860..1025
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 969..985
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 305..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 442..479
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 45..63
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..68
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 672..753

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig117contigA-nodosum_M_contig117:743180..759805 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig117.51.1mRNA_A-nodosum_M_contig117.51.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig117 743180..759945 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig117.51.1 ID=prot_A-nodosum_M_contig117.51.1|Name=mRNA_A-nodosum_M_contig117.51.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1025bp
MPPWVPGEGRQRRLQRSSTRDRLLVLLKQPKPRKRNGSALGVATFSDRED
SNLNTASSVEDFQPPSTVPPPEGAVFNSNQHRENHKEGRAMEDDFSLSIS
PSATPLPMPMITRHSPGKLDDTFEYSCPHSTLGRDEVGRAREIDLSVGRA
SIASGPFVRGNGPSATVPVKATETSPGESFAARERGGSGVSWSGMSVGGA
QALDDSTHAVDPGESRREPGGSFHRASGGGEKAGAFEDSAVVAVASGEAS
AEVAIPPSTYEGGCSMSCLEESAGSISRPDPRPSPLAIVGMSGSGVRSAG
TGPLPTARAGQQQVSPSSVPPSPTGGGGGSIGMFPMGTTTGNNGAEPGAL
PPPVARRSSRAPEEGRAGGQQLGGFSRKYAAEATSGGRLIARGVGSNKGS
GPPSAGSISTASNSSPTASRSGASTPDLRLPYDLPPSLEKRSPSTVVGSG
SRGTERGQHQGKTSATASSSATPPRQQGHVSTKAPLFPRPGLLPTGGSNS
SSAASTPAARAGGVRLAPFRRHRLSRSDSVGVWNPRTTRAHHVSSWPSRS
WSSCSTSLTATPSAGSGGGVGGGRGSRVGSPEDGIRGIGIGIAGALAAGR
RVGKWRGGRRKGEFFRAEEDTEDGIIGGPGGVGGEGFRERSYSDSEALST
TIPCETAPRTGVREAGRLIREHRYRSGGGGGGGADDHYQRRGLSKLRNAK
LLPSAVSWPGPLSLQRRTGRSRPPPPDDAMVSPPPSCVLYGEDPIEAMGI
PSRGSGGISLDRKLTVRSASFGGSHGWATPLFRQNRRGKRGGSGGRGIGA
STPMNPALVPPSPAGLLDMGHSLDALQYPLDYEKPSDRVVSGSMKTGFMK
LPSLLALQEARAGDPELAQERGESQPQHGLSSAPHGGGTAASSPASSAGC
NEPADYAAAAESGSGGGIGLGGPARFVGSSTTTAVVHSAGSQDAMMAPLH
TPSQAKPSKTEPPRPPGRPPHAQRRHARQRQRRRGPSRVAPWDSSDEQQP
PPPPEIKESGSCGGVPPRRSRPPKA
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